RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 ICE1Q9Y2F5 2266 aa2.56□□□□□ -2
COMMD6-210ENST00000483290 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
COMMD6-210ENST00000483290 H3BUX3 64 aa2.55□□□□□ -2
COMMD6-210ENST00000483290 KRTAP1-4P0C5Y4 121 aa2.55□□□□□ -2
COMMD6-210ENST00000483290 DEFB108BQ8NET1 73 aa2.54□□□□□ -2
COMMD6-210ENST00000483290 GPR179Q6PRD1 2367 aa2.54□□□□□ -2
COMMD6-210ENST00000483290 NAV3Q8IVL0 2385 aa2.54□□□□□ -2
COMMD6-210ENST00000483290 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
COMMD6-210ENST00000483290 ATRXP46100 2492 aa2.53□□□□□ -2
COMMD6-210ENST00000483290 CACNA1BQ00975 2339 aa2.53□□□□□ -2
COMMD6-210ENST00000483290 A0A0D9SG42 100 aa2.51□□□□□ -2.01
COMMD6-210ENST00000483290 TRIOBPQ9H2D6 2365 aa2.51□□□□□ -2.01
COMMD6-210ENST00000483290 DEFB119Q8N690 84 aa2.5□□□□□ -2.01
COMMD6-210ENST00000483290 FLG2Q5D862 2391 aaPredicted RBP2.49□□□□□ -2.01
COMMD6-210ENST00000483290 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
COMMD6-210ENST00000483290 COL6A3P12111 3177 aa2.49□□□□□ -2.01
COMMD6-210ENST00000483290 A0A0C4DFX4 3053 aa2.49□□□□□ -2.01
COMMD6-210ENST00000483290 SZT2Q5T011 3432 aa2.49□□□□□ -2.01
COMMD6-210ENST00000483290 WNK2Q9Y3S1 2297 aa2.48□□□□□ -2.01
COMMD6-210ENST00000483290 TPRP12270 2363 aaKnown RBP2.48□□□□□ -2.01
COMMD6-210ENST00000483290 CEP290O15078 2479 aa2.47□□□□□ -2.01
COMMD6-210ENST00000483290 UNC80Q8N2C7 3258 aa2.46□□□□□ -2.02
COMMD6-210ENST00000483290 COL6A6A6NMZ7 2263 aa2.46□□□□□ -2.02
COMMD6-210ENST00000483290 MKI67P46013 3256 aaKnown RBP2.44□□□□□ -2.02
COMMD6-210ENST00000483290 FAM208BQ5VWN6 2430 aa2.44□□□□□ -2.02
COMMD6-210ENST00000483290 CENPFP49454 3210 aa2.43□□□□□ -2.02
COMMD6-210ENST00000483290 PIEZO2Q9H5I5 2752 aa2.41□□□□□ -2.02
COMMD6-210ENST00000483290 IGF2RP11717 2491 aa2.4□□□□□ -2.03
COMMD6-210ENST00000483290 DEFB136Q30KP8 78 aa2.4□□□□□ -2.03
COMMD6-210ENST00000483290 WNK1Q9H4A3 2382 aa2.4□□□□□ -2.03
COMMD6-210ENST00000483290 BRCA2P51587 3418 aa2.4□□□□□ -2.03
COMMD6-210ENST00000483290 ZDBF2Q9HCK1 2354 aa2.39□□□□□ -2.03
COMMD6-210ENST00000483290 PCNX1Q96RV3 2341 aa2.39□□□□□ -2.03
COMMD6-210ENST00000483290 KRTAP12-1P59990 96 aa2.39□□□□□ -2.03
COMMD6-210ENST00000483290 VCANP13611 3396 aa2.38□□□□□ -2.03
COMMD6-210ENST00000483290 CACNA1AO00555 2505 aa2.38□□□□□ -2.03
COMMD6-210ENST00000483290 SPTBN5Q9NRC6 3674 aaKnown RBP2.38□□□□□ -2.03
COMMD6-210ENST00000483290 EYSQ5T1H1 3165 aa2.38□□□□□ -2.03
COMMD6-210ENST00000483290 OTOGLQ3ZCN5 2332 aa2.37□□□□□ -2.03
COMMD6-210ENST00000483290 RANBP2P49792 3224 aaKnown RBP2.37□□□□□ -2.03
COMMD6-210ENST00000483290 PRUNE2Q8WUY3 3088 aa2.37□□□□□ -2.03
COMMD6-210ENST00000483290 LAMA2P24043 3122 aaKnown RBP2.37□□□□□ -2.03
COMMD6-210ENST00000483290 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
COMMD6-210ENST00000483290 HTTP42858 3142 aa2.37□□□□□ -2.03
COMMD6-210ENST00000483290 NCOR1O75376 2440 aa2.36□□□□□ -2.03
COMMD6-210ENST00000483290 M0QZ58 72 aa2.35□□□□□ -2.03
COMMD6-210ENST00000483290 LAMA3Q16787 3333 aa2.35□□□□□ -2.03
COMMD6-210ENST00000483290 JMJD1CQ15652 2540 aa2.34□□□□□ -2.03
COMMD6-210ENST00000483290 SPINK6Q6UWN8 80 aa2.34□□□□□ -2.03
COMMD6-210ENST00000483290 MUC3AQ02505 3323 aa2.34□□□□□ -2.04
COMMD6-210ENST00000483290 MUC6Q6W4X9 2439 aa2.33□□□□□ -2.04
COMMD6-210ENST00000483290 BDP1A6H8Y1 2624 aa2.33□□□□□ -2.04
COMMD6-210ENST00000483290 TTC28Q96AY4 2481 aa2.32□□□□□ -2.04
COMMD6-210ENST00000483290 A0A096LNI7 61 aa2.32□□□□□ -2.04
COMMD6-210ENST00000483290 CD52P31358 61 aa2.32□□□□□ -2.04
COMMD6-210ENST00000483290 PIEZO1Q92508 2521 aa2.31□□□□□ -2.04
COMMD6-210ENST00000483290 BAHCC1Q9P281 2608 aa2.3□□□□□ -2.04
COMMD6-210ENST00000483290 DNAH12Q6ZR08 3092 aa2.3□□□□□ -2.04
COMMD6-210ENST00000483290 Q9Y3F1 56 aa2.3□□□□□ -2.04
COMMD6-210ENST00000483290 CACNA1GO43497 2377 aa2.3□□□□□ -2.04
COMMD6-210ENST00000483290 ZNF462Q96JM2 2506 aa2.29□□□□□ -2.04
COMMD6-210ENST00000483290 WDFY4Q6ZS81 3184 aa2.29□□□□□ -2.04
COMMD6-210ENST00000483290 REV3LO60673 3130 aa2.29□□□□□ -2.04
COMMD6-210ENST00000483290 SPTBN1Q01082 2364 aaKnown RBP2.29□□□□□ -2.04
COMMD6-210ENST00000483290 AKAP6Q13023 2319 aa2.29□□□□□ -2.04
COMMD6-210ENST00000483290 USP34Q70CQ2 3546 aa2.29□□□□□ -2.04
COMMD6-210ENST00000483290 CDH23Q9H251 3354 aa2.29□□□□□ -2.04
COMMD6-210ENST00000483290 SPTBN4Q9H254 2564 aa2.28□□□□□ -2.04
COMMD6-210ENST00000483290 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
COMMD6-210ENST00000483290 CFAP54Q96N23 3096 aa2.28□□□□□ -2.05
COMMD6-210ENST00000483290 PTPRZ1P23471 2315 aaPredicted RBP2.26□□□□□ -2.05
COMMD6-210ENST00000483290 PKD1L2Q7Z442 2459 aa2.26□□□□□ -2.05
COMMD6-210ENST00000483290 HIVEP2P31629 2446 aa2.26□□□□□ -2.05
COMMD6-210ENST00000483290 A0A096LPF7 62 aa2.26□□□□□ -2.05
COMMD6-210ENST00000483290 C5orf42Q9H799 3197 aa2.26□□□□□ -2.05
COMMD6-210ENST00000483290 PKDREJQ9NTG1 2253 aa2.25□□□□□ -2.05
COMMD6-210ENST00000483290 TRANK1O15050 2925 aa2.24□□□□□ -2.05
COMMD6-210ENST00000483290 XIRP2A4UGR9 3374 aa2.24□□□□□ -2.05
COMMD6-210ENST00000483290 ROS1P08922 2347 aa2.24□□□□□ -2.05
COMMD6-210ENST00000483290 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
COMMD6-210ENST00000483290 DEFB124Q8NES8 71 aa2.23□□□□□ -2.05
COMMD6-210ENST00000483290 TRIOO75962 3097 aa2.23□□□□□ -2.05
COMMD6-210ENST00000483290 DCHS1Q96JQ0 3298 aa2.22□□□□□ -2.05
COMMD6-210ENST00000483290 FAM186AA6NE01 2351 aa2.22□□□□□ -2.05
COMMD6-210ENST00000483290 MAP1BP46821 2468 aaKnown RBP2.21□□□□□ -2.06
COMMD6-210ENST00000483290 CHD9Q3L8U1 2897 aa2.21□□□□□ -2.06
COMMD6-210ENST00000483290 CHD7Q9P2D1 2997 aa2.2□□□□□ -2.06
COMMD6-210ENST00000483290 MYO15AQ9UKN7 3530 aa2.2□□□□□ -2.06
COMMD6-210ENST00000483290 SETXQ7Z333 2677 aaKnown RBP2.2□□□□□ -2.06
COMMD6-210ENST00000483290 CFAP47Q6ZTR5 3102 aa2.2□□□□□ -2.06
COMMD6-210ENST00000483290 CHD6Q8TD26 2715 aa2.2□□□□□ -2.06
COMMD6-210ENST00000483290 DMXL1Q9Y485 3027 aa2.2□□□□□ -2.06
COMMD6-210ENST00000483290 EPG5Q9HCE0 2579 aa2.19□□□□□ -2.06
COMMD6-210ENST00000483290 WDR87Q6ZQQ6 2873 aa2.19□□□□□ -2.06
COMMD6-210ENST00000483290 RIF1Q5UIP0 2472 aaKnown RBP2.19□□□□□ -2.06
COMMD6-210ENST00000483290 CHD8Q9HCK8 2581 aa2.19□□□□□ -2.06
COMMD6-210ENST00000483290 ANKRD11Q6UB99 2663 aaPredicted RBP2.19□□□□□ -2.06
COMMD6-210ENST00000483290 DMDP11532 3685 aa2.19□□□□□ -2.06
COMMD6-210ENST00000483290 VPS13AQ96RL7 3174 aa2.18□□□□□ -2.06
COMMD6-210ENST00000483290 SPART-AS1P0CW21 52 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms