RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 BCE1O60756 84 aa4.99□□□□□ -1.61
VMA21-203ENST00000477649 FAM19A1Q7Z5A9 133 aa4.99□□□□□ -1.61
VMA21-203ENST00000477649 Q8N377 158 aa4.99□□□□□ -1.61
VMA21-203ENST00000477649 LINC00846Q9NV44 126 aa4.99□□□□□ -1.61
VMA21-203ENST00000477649 F8WEM9 126 aa4.98□□□□□ -1.61
VMA21-203ENST00000477649 CHTF8P0CG12 524 aa4.98□□□□□ -1.61
VMA21-203ENST00000477649 LINC01547P58512 204 aaPredicted RBP4.98□□□□□ -1.61
VMA21-203ENST00000477649 PLAC8Q9NZF1 115 aa4.98□□□□□ -1.61
VMA21-203ENST00000477649 STARD9Q9P2P6 4700 aa4.97□□□□□ -1.61
VMA21-203ENST00000477649 SPRR1BP22528 89 aa4.97□□□□□ -1.61
VMA21-203ENST00000477649 UBE2AP49459 152 aa4.97□□□□□ -1.61
VMA21-203ENST00000477649 PHF5AQ7RTV0 110 aaKnown RBP4.97□□□□□ -1.61
VMA21-203ENST00000477649 SMCR5Q8TEV8 140 aa4.97□□□□□ -1.61
VMA21-203ENST00000477649 FUSP35637 526 aaKnown RBP eCLIP4.96□□□□□ -1.62
VMA21-203ENST00000477649 DEFB105AQ8NG35 78 aa4.96□□□□□ -1.62
VMA21-203ENST00000477649 CSMD3Q7Z407 3707 aa4.95□□□□□ -1.62
VMA21-203ENST00000477649 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
VMA21-203ENST00000477649 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
VMA21-203ENST00000477649 LYSTQ99698 3801 aa4.94□□□□□ -1.62
VMA21-203ENST00000477649 A0A1B0GV72 72 aa4.94□□□□□ -1.62
VMA21-203ENST00000477649 ERC2-IT1O76042 136 aa4.94□□□□□ -1.62
VMA21-203ENST00000477649 CXCL6P80162 114 aa4.94□□□□□ -1.62
VMA21-203ENST00000477649 DNAH6Q9C0G6 4158 aa4.93□□□□□ -1.62
VMA21-203ENST00000477649 RPL37AP61513 92 aaKnown RBP4.93□□□□□ -1.62
VMA21-203ENST00000477649 PRLHP81277 87 aa4.93□□□□□ -1.62
VMA21-203ENST00000477649 C1orf137Q5JT78 98 aa4.93□□□□□ -1.62
VMA21-203ENST00000477649 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
VMA21-203ENST00000477649 ST20-AS1Q8NBB2 130 aa4.93□□□□□ -1.62
VMA21-203ENST00000477649 HIGD2AQ9BW72 106 aa4.93□□□□□ -1.62
VMA21-203ENST00000477649 LINC00336Q6ZUF6 198 aa4.92□□□□□ -1.62
VMA21-203ENST00000477649 Q6ZVQ6 151 aa4.92□□□□□ -1.62
VMA21-203ENST00000477649 Q8NBF4 154 aa4.92□□□□□ -1.62
VMA21-203ENST00000477649 SPRR4Q96PI1 79 aa4.92□□□□□ -1.62
VMA21-203ENST00000477649 HYDINQ4G0P3 5121 aa4.92□□□□□ -1.62
VMA21-203ENST00000477649 PANO1I0J062 215 aa4.91□□□□□ -1.62
VMA21-203ENST00000477649 SMIM29Q86T20 159 aa4.91□□□□□ -1.62
VMA21-203ENST00000477649 CRYGAP11844 174 aa4.9□□□□□ -1.63
VMA21-203ENST00000477649 NREPQ16612 68 aa4.9□□□□□ -1.63
VMA21-203ENST00000477649 KRTAP11-1Q8IUC1 163 aa4.9□□□□□ -1.63
VMA21-203ENST00000477649 ANAPC13Q9BS18 74 aa4.9□□□□□ -1.63
VMA21-203ENST00000477649 ALMS1Q8TCU4 4167 aa4.9□□□□□ -1.63
VMA21-203ENST00000477649 DNAH10Q8IVF4 4471 aa4.9□□□□□ -1.63
VMA21-203ENST00000477649 TENM2Q9NT68 2774 aa4.89□□□□□ -1.63
VMA21-203ENST00000477649 IGKV3D-7A0A0C4DH55 119 aa4.89□□□□□ -1.63
VMA21-203ENST00000477649 ATOX1O00244 68 aa4.89□□□□□ -1.63
VMA21-203ENST00000477649 ZNF861PO60384 105 aa4.89□□□□□ -1.63
VMA21-203ENST00000477649 LCE6AA0A183 80 aa4.88□□□□□ -1.63
VMA21-203ENST00000477649 FAM236AA0A1B0GUQ0 79 aa4.88□□□□□ -1.63
VMA21-203ENST00000477649 FAM236BA0A1B0GV22 79 aa4.88□□□□□ -1.63
VMA21-203ENST00000477649 HIST1H4AP62805 103 aaKnown RBP4.88□□□□□ -1.63
VMA21-203ENST00000477649 HAMPP81172 84 aa4.88□□□□□ -1.63
VMA21-203ENST00000477649 LINC00483Q53H64 154 aa4.88□□□□□ -1.63
VMA21-203ENST00000477649 Q6ZSA8 131 aa4.88□□□□□ -1.63
VMA21-203ENST00000477649 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
VMA21-203ENST00000477649 A0A1W2PNM2 257 aa4.87□□□□□ -1.63
VMA21-203ENST00000477649 C3orf22Q8N5N4 141 aa4.87□□□□□ -1.63
VMA21-203ENST00000477649 BPY2O14599 106 aa4.86□□□□□ -1.63
VMA21-203ENST00000477649 IGFL1Q6UW32 110 aa4.86□□□□□ -1.63
VMA21-203ENST00000477649 SMIM20Q8N5G0 67 aa4.86□□□□□ -1.63
VMA21-203ENST00000477649 IGLV7-43P04211 117 aa4.85□□□□□ -1.63
VMA21-203ENST00000477649 KRTAP10-2P60368 255 aa4.85□□□□□ -1.63
VMA21-203ENST00000477649 FRAS1Q86XX4 4008 aa4.85□□□□□ -1.63
VMA21-203ENST00000477649 DNAH17Q9UFH2 4485 aa4.85□□□□□ -1.63
VMA21-203ENST00000477649 DNAH2Q9P225 4427 aa4.84□□□□□ -1.63
VMA21-203ENST00000477649 CIRBP-AS1Q8TBR5 109 aa4.84□□□□□ -1.63
VMA21-203ENST00000477649 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
VMA21-203ENST00000477649 UQCRQO14949 82 aa4.82□□□□□ -1.64
VMA21-203ENST00000477649 SCXQ7RTU7 201 aa4.82□□□□□ -1.64
VMA21-203ENST00000477649 SS18L2Q9UHA2 77 aa4.82□□□□□ -1.64
VMA21-203ENST00000477649 J3KT08 172 aa4.81□□□□□ -1.64
VMA21-203ENST00000477649 KRTAP10-1P60331 282 aa4.81□□□□□ -1.64
VMA21-203ENST00000477649 SERP2Q8N6R1 65 aa4.81□□□□□ -1.64
VMA21-203ENST00000477649 A0A087WSZ3 146 aa4.8□□□□□ -1.64
VMA21-203ENST00000477649 COX7CP15954 63 aa4.8□□□□□ -1.64
VMA21-203ENST00000477649 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
VMA21-203ENST00000477649 SSBP3-AS1Q7Z2R9 100 aa4.8□□□□□ -1.64
VMA21-203ENST00000477649 FAM30AQ9NZY2 134 aa4.8□□□□□ -1.64
VMA21-203ENST00000477649 HERC2O95714 4834 aa4.79□□□□□ -1.64
VMA21-203ENST00000477649 A0A087WVE0 104 aa4.79□□□□□ -1.64
VMA21-203ENST00000477649 CD164Q04900 197 aa4.79□□□□□ -1.64
VMA21-203ENST00000477649 FAM229BQ4G0N7 80 aa4.79□□□□□ -1.64
VMA21-203ENST00000477649 TRAV7A0A075B6U4 112 aa4.78□□□□□ -1.64
VMA21-203ENST00000477649 RYR1P21817 5038 aa4.78□□□□□ -1.65
VMA21-203ENST00000477649 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
VMA21-203ENST00000477649 HECTD4Q9Y4D8 3996 aa4.77□□□□□ -1.65
VMA21-203ENST00000477649 IGLV9-49A0A0B4J1Y8 123 aa4.77□□□□□ -1.65
VMA21-203ENST00000477649 IGKV4-1P06312 121 aa4.77□□□□□ -1.65
VMA21-203ENST00000477649 DSCR10P59022 87 aa4.75□□□□□ -1.65
VMA21-203ENST00000477649 MOBPQ13875 183 aa4.75□□□□□ -1.65
VMA21-203ENST00000477649 LINC00472Q9H8W2 130 aa4.75□□□□□ -1.65
VMA21-203ENST00000477649 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
VMA21-203ENST00000477649 A0A1B0GVY2 172 aa4.74□□□□□ -1.65
VMA21-203ENST00000477649 A8MWP4 228 aa4.74□□□□□ -1.65
VMA21-203ENST00000477649 NDUFB1O75438 58 aa4.74□□□□□ -1.65
VMA21-203ENST00000477649 DNAH11Q96DT5 4516 aa4.73□□□□□ -1.65
VMA21-203ENST00000477649 CCDC179H3BU77 68 aa4.73□□□□□ -1.65
VMA21-203ENST00000477649 ASB16-AS1Q495Z4 193 aa4.73□□□□□ -1.65
VMA21-203ENST00000477649 SPINK6Q6UWN8 80 aa4.73□□□□□ -1.65
VMA21-203ENST00000477649 HCG22E2RYF7 251 aa4.72□□□□□ -1.65
VMA21-203ENST00000477649 PRR15Q8IV56 129 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms