RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SPRR4Q96PI1 79 aa7.32□□□□□ -1.24
PRPF39-203ENST00000477626 C3orf22Q8N5N4 141 aa7.32□□□□□ -1.24
PRPF39-203ENST00000477626 SCXQ7RTU7 201 aa7.31□□□□□ -1.24
PRPF39-203ENST00000477626 SIGMAR1Q99720 223 aa7.31□□□□□ -1.24
PRPF39-203ENST00000477626 RBM3P98179 157 aaKnown RBP7.31□□□□□ -1.24
PRPF39-203ENST00000477626 A0A1W2PNM2 257 aa7.3□□□□□ -1.24
PRPF39-203ENST00000477626 Q6JHZ5 121 aa7.3□□□□□ -1.24
PRPF39-203ENST00000477626 FAM19A1Q7Z5A9 133 aa7.29□□□□□ -1.24
PRPF39-203ENST00000477626 Q6Q795 121 aa7.28□□□□□ -1.24
PRPF39-203ENST00000477626 HIST1H4AP62805 103 aaKnown RBP7.27□□□□□ -1.25
PRPF39-203ENST00000477626 PDE6GP18545 87 aa7.27□□□□□ -1.25
PRPF39-203ENST00000477626 KRTAP17-1Q9BYP8 105 aa7.27□□□□□ -1.25
PRPF39-203ENST00000477626 ZNF861PO60384 105 aa7.26□□□□□ -1.25
PRPF39-203ENST00000477626 SNCGO76070 127 aa7.26□□□□□ -1.25
PRPF39-203ENST00000477626 SCGB1A1P11684 91 aa7.26□□□□□ -1.25
PRPF39-203ENST00000477626 VPS25Q9BRG1 176 aa7.26□□□□□ -1.25
PRPF39-203ENST00000477626 IGLV7-43P04211 117 aa7.25□□□□□ -1.25
PRPF39-203ENST00000477626 GAGE2AQ6NT46 116 aa7.25□□□□□ -1.25
PRPF39-203ENST00000477626 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
PRPF39-203ENST00000477626 LINC00643Q86TS7 51 aa7.25□□□□□ -1.25
PRPF39-203ENST00000477626 A0A1B0GW54 56 aa7.24□□□□□ -1.25
PRPF39-203ENST00000477626 GHRHP01286 108 aa7.24□□□□□ -1.25
PRPF39-203ENST00000477626 KRTAP1-4P0C5Y4 121 aa7.24□□□□□ -1.25
PRPF39-203ENST00000477626 UBE2BP63146 152 aa7.24□□□□□ -1.25
PRPF39-203ENST00000477626 C21orf62-AS1Q17RA5 79 aa7.24□□□□□ -1.25
PRPF39-203ENST00000477626 CRYGAP11844 174 aa7.23□□□□□ -1.25
PRPF39-203ENST00000477626 A0A1B0GV72 72 aa7.22□□□□□ -1.25
PRPF39-203ENST00000477626 HAMPP81172 84 aa7.22□□□□□ -1.25
PRPF39-203ENST00000477626 Q8NBF4 154 aa7.22□□□□□ -1.25
PRPF39-203ENST00000477626 LAMTOR3Q9UHA4 124 aa7.22□□□□□ -1.25
PRPF39-203ENST00000477626 IMUPQ9GZP8 106 aa7.21□□□□□ -1.25
PRPF39-203ENST00000477626 DSCR8Q96T75 97 aa7.21□□□□□ -1.26
PRPF39-203ENST00000477626 DEFB105AQ8NG35 78 aa7.21□□□□□ -1.26
PRPF39-203ENST00000477626 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
PRPF39-203ENST00000477626 Q6ZVQ6 151 aa7.2□□□□□ -1.26
PRPF39-203ENST00000477626 A0A0G2JQZ4 141 aa7.19□□□□□ -1.26
PRPF39-203ENST00000477626 C1orf137Q5JT78 98 aa7.19□□□□□ -1.26
PRPF39-203ENST00000477626 HIGD2AQ9BW72 106 aa7.19□□□□□ -1.26
PRPF39-203ENST00000477626 RPL37AP61513 92 aaKnown RBP7.18□□□□□ -1.26
PRPF39-203ENST00000477626 Q96NJ1 140 aa7.18□□□□□ -1.26
PRPF39-203ENST00000477626 UBE2AP49459 152 aa7.17□□□□□ -1.26
PRPF39-203ENST00000477626 DPH3Q96FX2 82 aa7.17□□□□□ -1.26
PRPF39-203ENST00000477626 KIAA1109Q2LD37 5005 aa7.16□□□□□ -1.26
PRPF39-203ENST00000477626 CXCL6P80162 114 aa7.16□□□□□ -1.26
PRPF39-203ENST00000477626 KRTAP13-2Q52LG2 175 aa7.15□□□□□ -1.26
PRPF39-203ENST00000477626 ATP5EP2Q5VTU8 51 aa7.15□□□□□ -1.26
PRPF39-203ENST00000477626 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
PRPF39-203ENST00000477626 A0A087X002 238 aa7.12□□□□□ -1.27
PRPF39-203ENST00000477626 DSCR10P59022 87 aa7.11□□□□□ -1.27
PRPF39-203ENST00000477626 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
PRPF39-203ENST00000477626 IGKV4-1P06312 121 aa7.1□□□□□ -1.27
PRPF39-203ENST00000477626 ZNF706Q9Y5V0 76 aaPredicted RBP7.1□□□□□ -1.27
PRPF39-203ENST00000477626 MOBPQ13875 183 aa7.1□□□□□ -1.27
PRPF39-203ENST00000477626 FAM229BQ4G0N7 80 aa7.1□□□□□ -1.27
PRPF39-203ENST00000477626 MYCBP2O75592 4640 aa7.09□□□□□ -1.27
PRPF39-203ENST00000477626 ASB16-AS1Q495Z4 193 aa7.06□□□□□ -1.28
PRPF39-203ENST00000477626 Q5XG85 94 aa7.06□□□□□ -1.28
PRPF39-203ENST00000477626 IGKV3D-7A0A0C4DH55 119 aa7.06□□□□□ -1.28
PRPF39-203ENST00000477626 UBL5Q9BZL1 73 aa7.06□□□□□ -1.28
PRPF39-203ENST00000477626 A0A087WVE0 104 aa7.05□□□□□ -1.28
PRPF39-203ENST00000477626 CD164Q04900 197 aa7.05□□□□□ -1.28
PRPF39-203ENST00000477626 HERC2O95714 4834 aa7.04□□□□□ -1.28
PRPF39-203ENST00000477626 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
PRPF39-203ENST00000477626 CDK2AP2O75956 126 aa7.04□□□□□ -1.28
PRPF39-203ENST00000477626 SPINK6Q6UWN8 80 aa7.04□□□□□ -1.28
PRPF39-203ENST00000477626 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
PRPF39-203ENST00000477626 PCP4P48539 62 aa7.02□□□□□ -1.29
PRPF39-203ENST00000477626 ABCA13Q86UQ4 5058 aa7.02□□□□□ -1.29
PRPF39-203ENST00000477626 KRTAP29-1A8MX34 341 aaPredicted RBP7□□□□□ -1.29
PRPF39-203ENST00000477626 F8WEM9 126 aa7□□□□□ -1.29
PRPF39-203ENST00000477626 A0A087WSZ3 146 aa7□□□□□ -1.29
PRPF39-203ENST00000477626 SSBP3-AS1Q7Z2R9 100 aa6.99□□□□□ -1.29
PRPF39-203ENST00000477626 IGLV9-49A0A0B4J1Y8 123 aa6.99□□□□□ -1.29
PRPF39-203ENST00000477626 FAM236AA0A1B0GUQ0 79 aa6.99□□□□□ -1.29
PRPF39-203ENST00000477626 FAM236BA0A1B0GV22 79 aa6.99□□□□□ -1.29
PRPF39-203ENST00000477626 K7EQZ3 153 aa6.98□□□□□ -1.29
PRPF39-203ENST00000477626 BPY2O14599 106 aa6.98□□□□□ -1.29
PRPF39-203ENST00000477626 NREPQ16612 68 aa6.97□□□□□ -1.29
PRPF39-203ENST00000477626 Q8N9L7 120 aa6.97□□□□□ -1.29
PRPF39-203ENST00000477626 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
PRPF39-203ENST00000477626 OCR1Q9BZK8 76 aa6.94□□□□□ -1.3
PRPF39-203ENST00000477626 A8MWP4 228 aa6.92□□□□□ -1.3
PRPF39-203ENST00000477626 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
PRPF39-203ENST00000477626 PRR15Q8IV56 129 aa6.92□□□□□ -1.3
PRPF39-203ENST00000477626 MMP24-AS1A0A0U1RRL7 71 aa6.9□□□□□ -1.3
PRPF39-203ENST00000477626 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.3
PRPF39-203ENST00000477626 Q5VSD8 79 aa6.9□□□□□ -1.3
PRPF39-203ENST00000477626 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
PRPF39-203ENST00000477626 ATOX1O00244 68 aa6.89□□□□□ -1.31
PRPF39-203ENST00000477626 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
PRPF39-203ENST00000477626 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
PRPF39-203ENST00000477626 KRTAP16-1A8MUX0 517 aa6.87□□□□□ -1.31
PRPF39-203ENST00000477626 C1orf195Q5TG92 126 aa6.87□□□□□ -1.31
PRPF39-203ENST00000477626 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
PRPF39-203ENST00000477626 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
PRPF39-203ENST00000477626 Q8N1X5 172 aa6.87□□□□□ -1.31
PRPF39-203ENST00000477626 J3KT08 172 aa6.87□□□□□ -1.31
PRPF39-203ENST00000477626 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
PRPF39-203ENST00000477626 ANAPC13Q9BS18 74 aa6.86□□□□□ -1.31
PRPF39-203ENST00000477626 COX7CP15954 63 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms