RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 J3QR89 54 aa17.42■□□□□ 0.38
VEGFA-211ENST00000476772 ZNF706Q9Y5V0 76 aaPredicted RBP17.42■□□□□ 0.38
VEGFA-211ENST00000476772 DSCR8Q96T75 97 aa17.39■□□□□ 0.37
VEGFA-211ENST00000476772 LINC00483Q53H64 154 aa17.37■□□□□ 0.37
VEGFA-211ENST00000476772 TRBV7-4A0A0J9YYF1 115 aa17.36■□□□□ 0.37
VEGFA-211ENST00000476772 F8WEM9 126 aa17.36■□□□□ 0.37
VEGFA-211ENST00000476772 LOC110117498A0A087WWA1 95 aa17.35■□□□□ 0.37
VEGFA-211ENST00000476772 Q6ZQT0 140 aa17.34■□□□□ 0.37
VEGFA-211ENST00000476772 FAT1Q14517 4588 aa17.32■□□□□ 0.36
VEGFA-211ENST00000476772 CDK2AP2O75956 126 aa17.32■□□□□ 0.36
VEGFA-211ENST00000476772 ANAPC11Q9NYG5 84 aa17.32■□□□□ 0.36
VEGFA-211ENST00000476772 CCKP06307 115 aa17.31■□□□□ 0.36
VEGFA-211ENST00000476772 EPPK1P58107 5090 aaKnown RBP17.3■□□□□ 0.36
VEGFA-211ENST00000476772 PDE6GP18545 87 aa17.28■□□□□ 0.36
VEGFA-211ENST00000476772 KRTAP10-4P60372 401 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-211ENST00000476772 IGLV8-61A0A075B6I0 122 aa17.26■□□□□ 0.35
VEGFA-211ENST00000476772 HSPG2P98160 4391 aa17.25■□□□□ 0.35
VEGFA-211ENST00000476772 IGLV9-49A0A0B4J1Y8 123 aa17.23■□□□□ 0.35
VEGFA-211ENST00000476772 FAM240AA0A1B0GVK7 77 aa17.23■□□□□ 0.35
VEGFA-211ENST00000476772 VPS25Q9BRG1 176 aa17.23■□□□□ 0.35
VEGFA-211ENST00000476772 A0A0G2JQZ4 141 aa17.21■□□□□ 0.35
VEGFA-211ENST00000476772 IGFL1Q6UW32 110 aa17.21■□□□□ 0.35
VEGFA-211ENST00000476772 SPINK6Q6UWN8 80 aa17.21■□□□□ 0.35
VEGFA-211ENST00000476772 RYR1P21817 5038 aa17.2■□□□□ 0.34
VEGFA-211ENST00000476772 C9orf153Q5TBE3 101 aa17.19■□□□□ 0.34
VEGFA-211ENST00000476772 ACYP1P07311 99 aa17.18■□□□□ 0.34
VEGFA-211ENST00000476772 A0A1W2PNM2 257 aa17.16■□□□□ 0.34
VEGFA-211ENST00000476772 FAM229AH3BQW9 127 aa17.16■□□□□ 0.34
VEGFA-211ENST00000476772 KRTAP1-4P0C5Y4 121 aa17.16■□□□□ 0.34
VEGFA-211ENST00000476772 Q6JHZ5 121 aa17.15■□□□□ 0.34
VEGFA-211ENST00000476772 MOBPQ13875 183 aa17.14■□□□□ 0.33
VEGFA-211ENST00000476772 C21orf62-AS1Q17RA5 79 aa17.14■□□□□ 0.33
VEGFA-211ENST00000476772 PLA2G1BP04054 148 aaKnown RBP17.13■□□□□ 0.33
VEGFA-211ENST00000476772 Q8NBF4 154 aa17.13■□□□□ 0.33
VEGFA-211ENST00000476772 CDIP1Q9H305 208 aa17.13■□□□□ 0.33
VEGFA-211ENST00000476772 LINC00846Q9NV44 126 aa17.12■□□□□ 0.33
VEGFA-211ENST00000476772 FAM229BQ4G0N7 80 aa17.1■□□□□ 0.33
VEGFA-211ENST00000476772 Q5VSD8 79 aa17.1■□□□□ 0.33
VEGFA-211ENST00000476772 A0A087X002 238 aa17.09■□□□□ 0.33
VEGFA-211ENST00000476772 KIAA1109Q2LD37 5005 aa17.07■□□□□ 0.32
VEGFA-211ENST00000476772 KRTAP13-2Q52LG2 175 aa17.04■□□□□ 0.32
VEGFA-211ENST00000476772 KRTAP17-1Q9BYP8 105 aa17.04■□□□□ 0.32
VEGFA-211ENST00000476772 CRYGAP11844 174 aa17.02■□□□□ 0.32
VEGFA-211ENST00000476772 PKHD1L1Q86WI1 4243 aa17.01■□□□□ 0.31
VEGFA-211ENST00000476772 A0A1B0GW54 56 aa16.98■□□□□ 0.31
VEGFA-211ENST00000476772 Q6Q795 121 aa16.97■□□□□ 0.31
VEGFA-211ENST00000476772 SSBP3-AS1Q7Z2R9 100 aa16.97■□□□□ 0.31
VEGFA-211ENST00000476772 UBL5Q9BZL1 73 aa16.95■□□□□ 0.3
VEGFA-211ENST00000476772 HRCT1Q6UXD1 115 aa16.94■□□□□ 0.3
VEGFA-211ENST00000476772 Q8N1X5 172 aa16.94■□□□□ 0.3
VEGFA-211ENST00000476772 Q6ZVQ6 151 aa16.93■□□□□ 0.3
VEGFA-211ENST00000476772 A0A087WSZ3 146 aa16.92■□□□□ 0.3
VEGFA-211ENST00000476772 LINC00643Q86TS7 51 aa16.9■□□□□ 0.3
VEGFA-211ENST00000476772 PRR26Q8N8Z3 221 aa16.9■□□□□ 0.3
VEGFA-211ENST00000476772 TRBV7-7A0A0K0K1E9 115 aa16.88■□□□□ 0.29
VEGFA-211ENST00000476772 TYMSOSQ8TAI1 123 aa16.87■□□□□ 0.29
VEGFA-211ENST00000476772 NREPQ16612 68 aa16.86■□□□□ 0.29
VEGFA-211ENST00000476772 MT-ATP8P03928 68 aa16.85■□□□□ 0.29
VEGFA-211ENST00000476772 CD164Q04900 197 aa16.81■□□□□ 0.28
VEGFA-211ENST00000476772 SIGMAR1Q99720 223 aa16.8■□□□□ 0.28
VEGFA-211ENST00000476772 IGKV3D-7A0A0C4DH55 119 aa16.78■□□□□ 0.28
VEGFA-211ENST00000476772 ATP5EP2Q5VTU8 51 aa16.73■□□□□ 0.27
VEGFA-211ENST00000476772 BIRC6Q9NR09 4857 aa16.73■□□□□ 0.27
VEGFA-211ENST00000476772 SS18L2Q9UHA2 77 aa16.71■□□□□ 0.27
VEGFA-211ENST00000476772 BPY2O14599 106 aa16.68■□□□□ 0.26
VEGFA-211ENST00000476772 CXCL6P80162 114 aa16.67■□□□□ 0.26
VEGFA-211ENST00000476772 DEFB116Q30KQ4 102 aa16.67■□□□□ 0.26
VEGFA-211ENST00000476772 C4orf48Q5BLP8 95 aa16.66■□□□□ 0.26
VEGFA-211ENST00000476772 LINC00304Q8N9R0 145 aa16.66■□□□□ 0.26
VEGFA-211ENST00000476772 LINC00472Q9H8W2 130 aa16.65■□□□□ 0.26
VEGFA-211ENST00000476772 LRP1Q07954 4544 aaKnown RBP16.64■□□□□ 0.25
VEGFA-211ENST00000476772 Q96NJ1 140 aa16.62■□□□□ 0.25
VEGFA-211ENST00000476772 KRTAP4-5Q9BYR2 181 aa16.62■□□□□ 0.25
VEGFA-211ENST00000476772 FAT3Q8TDW7 4589 aa16.6■□□□□ 0.25
VEGFA-211ENST00000476772 SPINK1P00995 79 aa16.6■□□□□ 0.25
VEGFA-211ENST00000476772 SPAG11AQ6PDA7 123 aa16.58■□□□□ 0.24
VEGFA-211ENST00000476772 IMUPQ9GZP8 106 aa16.58■□□□□ 0.24
VEGFA-211ENST00000476772 DSCR10P59022 87 aa16.57■□□□□ 0.24
VEGFA-211ENST00000476772 Q5XG85 94 aa16.57■□□□□ 0.24
VEGFA-211ENST00000476772 Q8N9L7 120 aa16.56■□□□□ 0.24
VEGFA-211ENST00000476772 KRTAP10-8P60410 259 aa16.56■□□□□ 0.24
VEGFA-211ENST00000476772 HIST1H4AP62805 103 aaKnown RBP16.56■□□□□ 0.24
VEGFA-211ENST00000476772 LIMD2Q9BT23 127 aa16.56■□□□□ 0.24
VEGFA-211ENST00000476772 TNXBP22105 4242 aa16.55■□□□□ 0.24
VEGFA-211ENST00000476772 ASB16-AS1Q495Z4 193 aa16.55■□□□□ 0.24
VEGFA-211ENST00000476772 FLG2Q5D862 2391 aaPredicted RBP16.54■□□□□ 0.24
VEGFA-211ENST00000476772 A0A087WVE0 104 aa16.51■□□□□ 0.23
VEGFA-211ENST00000476772 IGKV4-1P06312 121 aa16.51■□□□□ 0.23
VEGFA-211ENST00000476772 RPS29P62273 56 aaKnown RBP16.5■□□□□ 0.23
VEGFA-211ENST00000476772 J3KT08 172 aa16.5■□□□□ 0.23
VEGFA-211ENST00000476772 HERC2O95714 4834 aa16.49■□□□□ 0.23
VEGFA-211ENST00000476772 K7EQZ3 153 aa16.48■□□□□ 0.23
VEGFA-211ENST00000476772 C1orf195Q5TG92 126 aa16.45■□□□□ 0.22
VEGFA-211ENST00000476772 MYCBP2O75592 4640 aa16.45■□□□□ 0.22
VEGFA-211ENST00000476772 A8MWP4 228 aa16.43■□□□□ 0.22
VEGFA-211ENST00000476772 MT1HL1P0DM35 61 aa16.4■□□□□ 0.22
VEGFA-211ENST00000476772 PRR15Q8IV56 129 aa16.37■□□□□ 0.21
VEGFA-211ENST00000476772 OXTP01178 125 aa16.37■□□□□ 0.21
VEGFA-211ENST00000476772 FAM236AA0A1B0GUQ0 79 aa16.35■□□□□ 0.21
VEGFA-211ENST00000476772 FAM236BA0A1B0GV22 79 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms