RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 SPRR2BP35325 72 aa0.06□□□□□ -2.4
VPS50-212ENST00000476413 H1FX-AS1Q4G0G2 97 aa0.06□□□□□ -2.4
VPS50-212ENST00000476413 LINC00643Q86TS7 51 aa0.06□□□□□ -2.4
VPS50-212ENST00000476413 S100A13Q99584 98 aa0.06□□□□□ -2.4
VPS50-212ENST00000476413 RGPD1P0DJD0 1748 aa0.06□□□□□ -2.4
VPS50-212ENST00000476413 DOT1LQ8TEK3 1739 aa0.06□□□□□ -2.4
VPS50-212ENST00000476413 URB2Q14146 1524 aaKnown RBP0.06□□□□□ -2.4
VPS50-212ENST00000476413 LAMA1P25391 3075 aa0.06□□□□□ -2.4
VPS50-212ENST00000476413 PRKDCP78527 4128 aaKnown RBP0.06□□□□□ -2.4
VPS50-212ENST00000476413 DEPDC5O75140 1603 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 MROH1Q8NDA8 1641 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 MAP3K4Q9Y6R4 1608 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 FRYQ5TBA9 3013 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 CEP162Q5TB80 1403 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 HUWE1Q7Z6Z7 4374 aaKnown RBP0.05□□□□□ -2.4
VPS50-212ENST00000476413 ALMS1Q8TCU4 4167 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 MAGI2Q86UL8 1455 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 LY75O60449 1722 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 TJP1Q07157 1748 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 MYO5CQ9NQX4 1742 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 TOGARAM1Q9Y4F4 1720 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 MAGI3Q5TCQ9 1506 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.05□□□□□ -2.4
VPS50-212ENST00000476413 LRRC7Q96NW7 1537 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 NBPF19A0A087WUL8 3843 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 MYMXA0A1B0GTQ4 84 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 K7EP34 96 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 SPRR2DP22532 72 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 SPRR2AP35326 72 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 IFI27P40305 119 aaPredicted RBP0.05□□□□□ -2.4
VPS50-212ENST00000476413 GNG2P59768 71 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 DEFB135Q30KP9 77 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 WFDC9Q8NEX5 89 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 S100ZQ8WXG8 99 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 C20orf78Q9BR46 151 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 ST20Q9HBF5 79 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 NOP10Q9NPE3 64 aaKnown RBP0.05□□□□□ -2.4
VPS50-212ENST00000476413 ADAMTS12P58397 1594 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 SAMD9Q5K651 1589 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 TTC37Q6PGP7 1564 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 CFAP74Q9C0B2 1584 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 LPAP08519 4548 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 SRCAPQ6ZRS2 3230 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 PIK3C2BO00750 1634 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 KIF14Q15058 1648 aa0.05□□□□□ -2.4
VPS50-212ENST00000476413 HFM1A2PYH4 1435 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 CDC42BPAQ5VT25 1732 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 LRRIQ1Q96JM4 1722 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 PKHD1P08F94 4074 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 ATP7BP35670 1465 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 CD163L1Q9NR16 1453 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 CENPEQ02224 2701 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 KDM5DQ9BY66 1539 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 FLGP20930 4061 aaPredicted RBP0.04□□□□□ -2.4
VPS50-212ENST00000476413 SMARCA2P51531 1590 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 NWD1Q149M9 1564 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 INO80Q9ULG1 1556 aaPredicted RBP0.04□□□□□ -2.4
VPS50-212ENST00000476413 MMP24-AS1A0A0U1RRL7 71 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 CEBPZOSA8MTT3 80 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 H0YGX0 51 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 M0QZ58 72 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 PDCD5O14737 125 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 PRM1P04553 51 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 MT1AP04731 61 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 ADIRFQ15847 76 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 UBL5Q9BZL1 73 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 NMES1Q9C002 83 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 KCNQ1DNQ9H478 68 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 TIMM8BQ9Y5J9 83 aaPredicted RBP0.04□□□□□ -2.4
VPS50-212ENST00000476413 USP32Q8NFA0 1604 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 DSTQ03001 7570 aaKnown RBP0.04□□□□□ -2.4
VPS50-212ENST00000476413 WIZO95785 1651 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 NHSQ6T4R5 1651 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 ATMQ13315 3056 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 ADGRG4Q8IZF6 3080 aa0.04□□□□□ -2.4
VPS50-212ENST00000476413 MED14O60244 1454 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 CMYA5Q8N3K9 4069 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 ITPR2Q14571 2701 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 FAT2Q9NYQ8 4349 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 CEP170BQ9Y4F5 1589 aaPredicted RBP0.03□□□□□ -2.4
VPS50-212ENST00000476413 DNAH7Q8WXX0 4024 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 TMEM131LA2VDJ0 1609 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 MADDQ8WXG6 1647 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 C3P01024 1663 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 ZC3H13Q5T200 1668 aaKnown RBP0.03□□□□□ -2.4
VPS50-212ENST00000476413 FAM208AQ9UK61 1670 aaKnown RBP0.03□□□□□ -2.4
VPS50-212ENST00000476413 A0A087WWC5 75 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 TRAV21A0A0B4J279 112 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 H0YAA0 97 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 H3BNG1 76 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 DEFB131AP59861 70 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 MT1HP80294 61 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 PRLHP81277 87 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 DEFA5Q01523 94 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 KRTAP6-1Q3LI64 71 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 WFDC13Q8IUB5 93 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 C18orf32Q8TCD1 76 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 LYSTQ99698 3801 aa0.03□□□□□ -2.4
VPS50-212ENST00000476413 PRO3102Q9H379 93 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms