RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
CCNL1-217ENST00000476367 Q6ZQY7 126 aa8.42□□□□□ -1.06
CCNL1-217ENST00000476367 SMIM29Q86T20 159 aa8.42□□□□□ -1.06
CCNL1-217ENST00000476367 K7EP34 96 aa8.41□□□□□ -1.06
CCNL1-217ENST00000476367 FABP2P12104 132 aa8.41□□□□□ -1.06
CCNL1-217ENST00000476367 IGLV9-49A0A0B4J1Y8 123 aa8.4□□□□□ -1.06
CCNL1-217ENST00000476367 PSMB2P49721 201 aa8.4□□□□□ -1.06
CCNL1-217ENST00000476367 DEFB105AQ8NG35 78 aa8.4□□□□□ -1.07
CCNL1-217ENST00000476367 SLC25A20O43772 301 aa8.39□□□□□ -1.07
CCNL1-217ENST00000476367 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
CCNL1-217ENST00000476367 MOBPQ13875 183 aa8.38□□□□□ -1.07
CCNL1-217ENST00000476367 SPCS1Q9Y6A9 102 aa8.38□□□□□ -1.07
CCNL1-217ENST00000476367 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
CCNL1-217ENST00000476367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.37□□□□□ -1.07
CCNL1-217ENST00000476367 A0A1B0GX51 115 aa8.36□□□□□ -1.07
CCNL1-217ENST00000476367 C9orf153Q5TBE3 101 aa8.36□□□□□ -1.07
CCNL1-217ENST00000476367 LST1O00453 97 aa8.36□□□□□ -1.07
CCNL1-217ENST00000476367 Q8NBF4 154 aa8.36□□□□□ -1.07
CCNL1-217ENST00000476367 TCL1BO95988 128 aa8.35□□□□□ -1.07
CCNL1-217ENST00000476367 COX6CP09669 75 aa8.35□□□□□ -1.07
CCNL1-217ENST00000476367 SCGB1C2P0DMR2 95 aa8.33□□□□□ -1.08
CCNL1-217ENST00000476367 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
CCNL1-217ENST00000476367 LYRM7Q5U5X0 104 aa8.33□□□□□ -1.08
CCNL1-217ENST00000476367 LAMTOR3Q9UHA4 124 aa8.32□□□□□ -1.08
CCNL1-217ENST00000476367 TRACP01848 142 aa8.31□□□□□ -1.08
CCNL1-217ENST00000476367 A0A0G2JQZ4 141 aa8.3□□□□□ -1.08
CCNL1-217ENST00000476367 C4orf48Q5BLP8 95 aa8.3□□□□□ -1.08
CCNL1-217ENST00000476367 SSBP3-AS1Q7Z2R9 100 aa8.29□□□□□ -1.08
CCNL1-217ENST00000476367 PPDPFLQ8WWR9 84 aa8.29□□□□□ -1.08
CCNL1-217ENST00000476367 OCIAD2Q56VL3 154 aa8.28□□□□□ -1.08
CCNL1-217ENST00000476367 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
CCNL1-217ENST00000476367 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
CCNL1-217ENST00000476367 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
CCNL1-217ENST00000476367 IGLV8-61A0A075B6I0 122 aa8.27□□□□□ -1.09
CCNL1-217ENST00000476367 TRBV20-1A0A075B6N2 111 aa8.27□□□□□ -1.09
CCNL1-217ENST00000476367 F8W1H4 67 aa8.26□□□□□ -1.09
CCNL1-217ENST00000476367 LRP2P98164 4655 aa8.26□□□□□ -1.09
CCNL1-217ENST00000476367 PRR4Q16378 134 aa8.26□□□□□ -1.09
CCNL1-217ENST00000476367 SNCGO76070 127 aa8.25□□□□□ -1.09
CCNL1-217ENST00000476367 ORMDL1Q9P0S3 153 aa8.25□□□□□ -1.09
CCNL1-217ENST00000476367 DNAL4O96015 105 aa8.25□□□□□ -1.09
CCNL1-217ENST00000476367 ATXN8Q156A1 80 aa8.25□□□□□ -1.09
CCNL1-217ENST00000476367 SPINK1P00995 79 aa8.24□□□□□ -1.09
CCNL1-217ENST00000476367 NDUFV3P56181 108 aaKnown RBP8.24□□□□□ -1.09
CCNL1-217ENST00000476367 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
CCNL1-217ENST00000476367 F8WEM9 126 aa8.23□□□□□ -1.09
CCNL1-217ENST00000476367 H3BMG7 143 aa8.23□□□□□ -1.09
CCNL1-217ENST00000476367 HRCT1Q6UXD1 115 aa8.22□□□□□ -1.09
CCNL1-217ENST00000476367 IGFL1Q6UW32 110 aa8.21□□□□□ -1.09
CCNL1-217ENST00000476367 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.1
CCNL1-217ENST00000476367 TMEM256-PLSCR3K7ERE1 68 aa8.21□□□□□ -1.1
CCNL1-217ENST00000476367 K7ERU9 68 aa8.21□□□□□ -1.1
CCNL1-217ENST00000476367 BAALC-AS2P0C853 105 aa8.21□□□□□ -1.1
CCNL1-217ENST00000476367 MTURNQ8N3F0 131 aa8.19□□□□□ -1.1
CCNL1-217ENST00000476367 C9JAW5 83 aa8.18□□□□□ -1.1
CCNL1-217ENST00000476367 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
CCNL1-217ENST00000476367 H3BQ85 93 aa8.17□□□□□ -1.1
CCNL1-217ENST00000476367 LPAP08519 4548 aa8.16□□□□□ -1.1
CCNL1-217ENST00000476367 A0A1B0GV72 72 aa8.16□□□□□ -1.1
CCNL1-217ENST00000476367 GHRHP01286 108 aa8.16□□□□□ -1.1
CCNL1-217ENST00000476367 CD164Q04900 197 aa8.15□□□□□ -1.1
CCNL1-217ENST00000476367 Q6JHZ5 121 aa8.15□□□□□ -1.1
CCNL1-217ENST00000476367 ANKRD29Q8N6D5 301 aa8.15□□□□□ -1.1
CCNL1-217ENST00000476367 LIMD2Q9BT23 127 aa8.14□□□□□ -1.11
CCNL1-217ENST00000476367 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
CCNL1-217ENST00000476367 TRBV7-4A0A0J9YYF1 115 aa8.13□□□□□ -1.11
CCNL1-217ENST00000476367 A0A1W2PNM2 257 aa8.13□□□□□ -1.11
CCNL1-217ENST00000476367 ETDBQ3ZM63 59 aa8.13□□□□□ -1.11
CCNL1-217ENST00000476367 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
CCNL1-217ENST00000476367 J3QR89 54 aa8.11□□□□□ -1.11
CCNL1-217ENST00000476367 H3BT86 120 aa8.11□□□□□ -1.11
CCNL1-217ENST00000476367 Q5XG85 94 aa8.11□□□□□ -1.11
CCNL1-217ENST00000476367 Q6Q795 121 aa8.11□□□□□ -1.11
CCNL1-217ENST00000476367 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
CCNL1-217ENST00000476367 TEN1Q86WV5 123 aa8.11□□□□□ -1.11
CCNL1-217ENST00000476367 TRBV7-7A0A0K0K1E9 115 aa8.09□□□□□ -1.11
CCNL1-217ENST00000476367 RBM3P98179 157 aaKnown RBP8.08□□□□□ -1.12
CCNL1-217ENST00000476367 TPRXLQ17RH7 258 aa8.07□□□□□ -1.12
CCNL1-217ENST00000476367 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
CCNL1-217ENST00000476367 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
CCNL1-217ENST00000476367 JMJD7-PLA2G4BH0Y9G9 81 aa8.04□□□□□ -1.12
CCNL1-217ENST00000476367 C1orf195Q5TG92 126 aa8.04□□□□□ -1.12
CCNL1-217ENST00000476367 Q6ZQT0 140 aa8.04□□□□□ -1.12
CCNL1-217ENST00000476367 C14orf132Q9NPU4 83 aa8.04□□□□□ -1.12
CCNL1-217ENST00000476367 CCKP06307 115 aa8.03□□□□□ -1.12
CCNL1-217ENST00000476367 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
CCNL1-217ENST00000476367 LOC110117498A0A087WWA1 95 aa8.03□□□□□ -1.12
CCNL1-217ENST00000476367 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
CCNL1-217ENST00000476367 DSCR8Q96T75 97 aa8.03□□□□□ -1.12
CCNL1-217ENST00000476367 A0A087WSZ3 146 aa8.02□□□□□ -1.13
CCNL1-217ENST00000476367 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
CCNL1-217ENST00000476367 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
CCNL1-217ENST00000476367 Q96NJ1 140 aa8□□□□□ -1.13
CCNL1-217ENST00000476367 SS18L2Q9UHA2 77 aa7.96□□□□□ -1.14
CCNL1-217ENST00000476367 LOC100996750A0A140TA64 210 aa7.94□□□□□ -1.14
CCNL1-217ENST00000476367 C9orf92A6NGG3 77 aa7.94□□□□□ -1.14
CCNL1-217ENST00000476367 PDE6GP18545 87 aa7.94□□□□□ -1.14
CCNL1-217ENST00000476367 KRTAP4-6Q9BYQ5 205 aa7.94□□□□□ -1.14
CCNL1-217ENST00000476367 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
CCNL1-217ENST00000476367 FAM240AA0A1B0GVK7 77 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms