RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 LINC00472Q9H8W2 130 aa10.84□□□□□ -0.67
LPCAT1-202ENST00000475622 Q5VV11 94 aa10.83□□□□□ -0.68
LPCAT1-202ENST00000475622 CENPEQ02224 2701 aa10.82□□□□□ -0.68
LPCAT1-202ENST00000475622 S4R3F8 94 aa10.81□□□□□ -0.68
LPCAT1-202ENST00000475622 DNAH12Q6ZR08 3092 aa10.81□□□□□ -0.68
LPCAT1-202ENST00000475622 SPRR1BP22528 89 aa10.8□□□□□ -0.68
LPCAT1-202ENST00000475622 SPINK7P58062 85 aa10.8□□□□□ -0.68
LPCAT1-202ENST00000475622 CFAP46Q8IYW2 2715 aa10.79□□□□□ -0.68
LPCAT1-202ENST00000475622 CHD6Q8TD26 2715 aa10.76□□□□□ -0.69
LPCAT1-202ENST00000475622 NBEAL1Q6ZS30 2694 aa10.75□□□□□ -0.69
LPCAT1-202ENST00000475622 R4GN34 69 aa10.69□□□□□ -0.7
LPCAT1-202ENST00000475622 KRTAP1-5Q9BYS1 174 aa10.67□□□□□ -0.7
LPCAT1-202ENST00000475622 H3BS24 57 aa10.67□□□□□ -0.7
LPCAT1-202ENST00000475622 KRTAP26-1Q6PEX3 210 aa10.64□□□□□ -0.71
LPCAT1-202ENST00000475622 TEP1Q99973 2627 aaKnown RBP10.64□□□□□ -0.71
LPCAT1-202ENST00000475622 TEX15Q9BXT5 2789 aa10.63□□□□□ -0.71
LPCAT1-202ENST00000475622 NOTCH1P46531 2555 aa10.62□□□□□ -0.71
LPCAT1-202ENST00000475622 OXTP01178 125 aa10.62□□□□□ -0.71
LPCAT1-202ENST00000475622 A0A0A0MQY5 61 aa10.61□□□□□ -0.71
LPCAT1-202ENST00000475622 RPL37P61927 97 aaKnown RBP10.6□□□□□ -0.71
LPCAT1-202ENST00000475622 C5orf42Q9H799 3197 aa10.59□□□□□ -0.71
LPCAT1-202ENST00000475622 DMBT1Q9UGM3 2413 aaPredicted RBP10.57□□□□□ -0.72
LPCAT1-202ENST00000475622 SETXQ7Z333 2677 aaKnown RBP10.56□□□□□ -0.72
LPCAT1-202ENST00000475622 UNC79Q9P2D8 2635 aa10.56□□□□□ -0.72
LPCAT1-202ENST00000475622 ROMO1P60602 79 aa10.55□□□□□ -0.72
LPCAT1-202ENST00000475622 SEC61BP60468 96 aaKnown RBP10.54□□□□□ -0.72
LPCAT1-202ENST00000475622 GCN1Q92616 2671 aaKnown RBP10.52□□□□□ -0.73
LPCAT1-202ENST00000475622 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
LPCAT1-202ENST00000475622 KRTAP10-1P60331 282 aa10.51□□□□□ -0.73
LPCAT1-202ENST00000475622 STAB2Q8WWQ8 2551 aa10.5□□□□□ -0.73
LPCAT1-202ENST00000475622 M0QZ58 72 aa10.49□□□□□ -0.73
LPCAT1-202ENST00000475622 Q5VSD8 79 aa10.48□□□□□ -0.73
LPCAT1-202ENST00000475622 KRTAP10-2P60368 255 aa10.48□□□□□ -0.73
LPCAT1-202ENST00000475622 Q6ZR54 194 aa10.47□□□□□ -0.73
LPCAT1-202ENST00000475622 COL6A5A8TX70 2615 aa10.46□□□□□ -0.74
LPCAT1-202ENST00000475622 KRTAP4-16G5E9R7 235 aaPredicted RBP10.44□□□□□ -0.74
LPCAT1-202ENST00000475622 CFAP54Q96N23 3096 aa10.44□□□□□ -0.74
LPCAT1-202ENST00000475622 KRTAP29-1A8MX34 341 aaPredicted RBP10.43□□□□□ -0.74
LPCAT1-202ENST00000475622 CHD7Q9P2D1 2997 aa10.43□□□□□ -0.74
LPCAT1-202ENST00000475622 SPATA8Q6RVD6 105 aa10.42□□□□□ -0.74
LPCAT1-202ENST00000475622 PANO1I0J062 215 aa10.42□□□□□ -0.74
LPCAT1-202ENST00000475622 ADM2Q7Z4H4 148 aa10.36□□□□□ -0.75
LPCAT1-202ENST00000475622 MGAQ8IWI9 3026 aa10.33□□□□□ -0.76
LPCAT1-202ENST00000475622 LCE6AA0A183 80 aa10.33□□□□□ -0.76
LPCAT1-202ENST00000475622 A0A087X002 238 aa10.32□□□□□ -0.76
LPCAT1-202ENST00000475622 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
LPCAT1-202ENST00000475622 UTRNP46939 3433 aa10.31□□□□□ -0.76
LPCAT1-202ENST00000475622 NOTCH2NLQ7Z3S9 236 aa10.31□□□□□ -0.76
LPCAT1-202ENST00000475622 A0A0C4DFX4 3053 aa10.3□□□□□ -0.76
LPCAT1-202ENST00000475622 PCNTO95613 3336 aa10.3□□□□□ -0.76
LPCAT1-202ENST00000475622 ASB16-AS1Q495Z4 193 aa10.29□□□□□ -0.76
LPCAT1-202ENST00000475622 PLAC4Q8WY50 150 aa10.24□□□□□ -0.77
LPCAT1-202ENST00000475622 ZNF292O60281 2723 aa10.24□□□□□ -0.77
LPCAT1-202ENST00000475622 MAP1AP78559 2803 aaPredicted RBP10.22□□□□□ -0.77
LPCAT1-202ENST00000475622 BAHCC1Q9P281 2608 aa10.21□□□□□ -0.78
LPCAT1-202ENST00000475622 UBR5O95071 2799 aaPredicted RBP10.21□□□□□ -0.78
LPCAT1-202ENST00000475622 CHD9Q3L8U1 2897 aa10.18□□□□□ -0.78
LPCAT1-202ENST00000475622 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
LPCAT1-202ENST00000475622 A8MU10 97 aa10.13□□□□□ -0.79
LPCAT1-202ENST00000475622 RANBP2P49792 3224 aaKnown RBP10.11□□□□□ -0.79
LPCAT1-202ENST00000475622 LAMA2P24043 3122 aaKnown RBP10.1□□□□□ -0.79
LPCAT1-202ENST00000475622 A6NN06 94 aa10.1□□□□□ -0.79
LPCAT1-202ENST00000475622 KRTAP25-1Q3LHN0 102 aa10.09□□□□□ -0.79
LPCAT1-202ENST00000475622 NSD1Q96L73 2696 aaPredicted RBP10.09□□□□□ -0.79
LPCAT1-202ENST00000475622 WDFY4Q6ZS81 3184 aa10.07□□□□□ -0.8
LPCAT1-202ENST00000475622 KRTAP7-1Q8IUC3 87 aa10.05□□□□□ -0.8
LPCAT1-202ENST00000475622 KRTAP16-1A8MUX0 517 aa10.04□□□□□ -0.8
LPCAT1-202ENST00000475622 A8MUU9 505 aa10.03□□□□□ -0.8
LPCAT1-202ENST00000475622 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
LPCAT1-202ENST00000475622 Q6ZRN7 208 aaPredicted RBP10.01□□□□□ -0.81
LPCAT1-202ENST00000475622 DSPP15924 2871 aaKnown RBP10.01□□□□□ -0.81
LPCAT1-202ENST00000475622 FRYQ5TBA9 3013 aa10□□□□□ -0.81
LPCAT1-202ENST00000475622 KRTAP13-2Q52LG2 175 aa9.97□□□□□ -0.81
LPCAT1-202ENST00000475622 IGSF10Q6WRI0 2623 aa9.94□□□□□ -0.82
LPCAT1-202ENST00000475622 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
LPCAT1-202ENST00000475622 KRTAP13-1Q8IUC0 172 aa9.92□□□□□ -0.82
LPCAT1-202ENST00000475622 HTTP42858 3142 aa9.91□□□□□ -0.82
LPCAT1-202ENST00000475622 FREM2Q5SZK8 3169 aa9.9□□□□□ -0.82
LPCAT1-202ENST00000475622 LAMA3Q16787 3333 aa9.89□□□□□ -0.83
LPCAT1-202ENST00000475622 ITPR2Q14571 2701 aa9.88□□□□□ -0.83
LPCAT1-202ENST00000475622 TRANK1O15050 2925 aa9.88□□□□□ -0.83
LPCAT1-202ENST00000475622 TRIOO75962 3097 aa9.88□□□□□ -0.83
LPCAT1-202ENST00000475622 NDUFAF8A1L188 74 aa9.87□□□□□ -0.83
LPCAT1-202ENST00000475622 ITPR1Q14643 2758 aa9.86□□□□□ -0.83
LPCAT1-202ENST00000475622 MKI67P46013 3256 aaKnown RBP9.85□□□□□ -0.83
LPCAT1-202ENST00000475622 PRUNE2Q8WUY3 3088 aa9.84□□□□□ -0.83
LPCAT1-202ENST00000475622 KMT2BQ9UMN6 2715 aaPredicted RBP9.77□□□□□ -0.85
LPCAT1-202ENST00000475622 TACC2O95359 2948 aa9.76□□□□□ -0.85
LPCAT1-202ENST00000475622 VPS13AQ96RL7 3174 aa9.75□□□□□ -0.85
LPCAT1-202ENST00000475622 APCP25054 2843 aa9.74□□□□□ -0.85
LPCAT1-202ENST00000475622 DMXL2Q8TDJ6 3036 aa9.73□□□□□ -0.85
LPCAT1-202ENST00000475622 TNP1P09430 55 aa9.73□□□□□ -0.85
LPCAT1-202ENST00000475622 KALRNO60229 2985 aa9.72□□□□□ -0.85
LPCAT1-202ENST00000475622 ASH1LQ9NR48 2969 aaKnown RBP9.71□□□□□ -0.85
LPCAT1-202ENST00000475622 UTP20O75691 2785 aaKnown RBP9.7□□□□□ -0.86
LPCAT1-202ENST00000475622 XIRP2A4UGR9 3374 aa9.69□□□□□ -0.86
LPCAT1-202ENST00000475622 BRCA2P51587 3418 aa9.69□□□□□ -0.86
LPCAT1-202ENST00000475622 HIVEP1P15822 2718 aa9.68□□□□□ -0.86
LPCAT1-202ENST00000475622 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
LPCAT1-202ENST00000475622 REV3LO60673 3130 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms