RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 LINC01600Q96MT4 127 aa12.23□□□□□ -0.45
NPM3-204ENST00000474993 F8WEM9 126 aa12.22□□□□□ -0.45
NPM3-204ENST00000474993 K7EP34 96 aa12.21□□□□□ -0.45
NPM3-204ENST00000474993 BAALC-AS2P0C853 105 aa12.21□□□□□ -0.45
NPM3-204ENST00000474993 C9JAW5 83 aa12.2□□□□□ -0.46
NPM3-204ENST00000474993 H3BMG7 143 aa12.2□□□□□ -0.46
NPM3-204ENST00000474993 UBE2V1Q13404 147 aa12.18□□□□□ -0.46
NPM3-204ENST00000474993 PRR26Q8N8Z3 221 aa12.18□□□□□ -0.46
NPM3-204ENST00000474993 A0A087X002 238 aa12.17□□□□□ -0.46
NPM3-204ENST00000474993 IGLV9-49A0A0B4J1Y8 123 aa12.17□□□□□ -0.46
NPM3-204ENST00000474993 SMIM29Q86T20 159 aa12.17□□□□□ -0.46
NPM3-204ENST00000474993 NDUFV3P56181 108 aaKnown RBP12.16□□□□□ -0.46
NPM3-204ENST00000474993 C9orf153Q5TBE3 101 aa12.16□□□□□ -0.46
NPM3-204ENST00000474993 TYMSOSQ8TAI1 123 aa12.16□□□□□ -0.46
NPM3-204ENST00000474993 SSBP3-AS1Q7Z2R9 100 aa12.15□□□□□ -0.46
NPM3-204ENST00000474993 Q8NBF4 154 aa12.15□□□□□ -0.46
NPM3-204ENST00000474993 FLG2Q5D862 2391 aaPredicted RBP12.14□□□□□ -0.47
NPM3-204ENST00000474993 PKHD1L1Q86WI1 4243 aa12.14□□□□□ -0.47
NPM3-204ENST00000474993 KRTAP29-1A8MX34 341 aaPredicted RBP12.14□□□□□ -0.47
NPM3-204ENST00000474993 H3BT86 120 aa12.14□□□□□ -0.47
NPM3-204ENST00000474993 C3orf22Q8N5N4 141 aa12.14□□□□□ -0.47
NPM3-204ENST00000474993 MOBPQ13875 183 aa12.13□□□□□ -0.47
NPM3-204ENST00000474993 KRTAP13-2Q52LG2 175 aa12.13□□□□□ -0.47
NPM3-204ENST00000474993 ANKRD29Q8N6D5 301 aa12.12□□□□□ -0.47
NPM3-204ENST00000474993 KRTAP10-8P60410 259 aa12.1□□□□□ -0.47
NPM3-204ENST00000474993 Q6JHZ5 121 aa12.1□□□□□ -0.47
NPM3-204ENST00000474993 IGLV8-61A0A075B6I0 122 aa12.09□□□□□ -0.47
NPM3-204ENST00000474993 JMJD7-PLA2G4BH0Y9G9 81 aa12.07□□□□□ -0.48
NPM3-204ENST00000474993 A0A1B0GV90 55 aa12.05□□□□□ -0.48
NPM3-204ENST00000474993 F8W1H4 67 aa12.05□□□□□ -0.48
NPM3-204ENST00000474993 J3QL48 77 aa12.05□□□□□ -0.48
NPM3-204ENST00000474993 C4orf48Q5BLP8 95 aa12.05□□□□□ -0.48
NPM3-204ENST00000474993 RBM3P98179 157 aaKnown RBP12.04□□□□□ -0.48
NPM3-204ENST00000474993 MTURNQ8N3F0 131 aa12.04□□□□□ -0.48
NPM3-204ENST00000474993 SPAG11AQ6PDA7 123 aa12.03□□□□□ -0.48
NPM3-204ENST00000474993 LINC00304Q8N9R0 145 aa12.02□□□□□ -0.49
NPM3-204ENST00000474993 ABCA13Q86UQ4 5058 aa12.01□□□□□ -0.49
NPM3-204ENST00000474993 MT1HL1P0DM35 61 aa12.01□□□□□ -0.49
NPM3-204ENST00000474993 DSCR8Q96T75 97 aa12.01□□□□□ -0.49
NPM3-204ENST00000474993 PRO0461Q9UI25 63 aa12.01□□□□□ -0.49
NPM3-204ENST00000474993 CD164Q04900 197 aa11.99□□□□□ -0.49
NPM3-204ENST00000474993 IGFL1Q6UW32 110 aa11.99□□□□□ -0.49
NPM3-204ENST00000474993 A0A1B0GV72 72 aa11.97□□□□□ -0.49
NPM3-204ENST00000474993 PDE6GP18545 87 aa11.97□□□□□ -0.49
NPM3-204ENST00000474993 SMCPP49901 116 aaPredicted RBP11.97□□□□□ -0.49
NPM3-204ENST00000474993 C21orf62-AS1Q17RA5 79 aa11.97□□□□□ -0.49
NPM3-204ENST00000474993 SPINK1P00995 79 aa11.96□□□□□ -0.49
NPM3-204ENST00000474993 OBSCN-AS1Q96MR7 158 aa11.95□□□□□ -0.5
NPM3-204ENST00000474993 TRBV7-4A0A0J9YYF1 115 aa11.94□□□□□ -0.5
NPM3-204ENST00000474993 TEN1Q86WV5 123 aa11.93□□□□□ -0.5
NPM3-204ENST00000474993 LOC110117498A0A087WWA1 95 aa11.91□□□□□ -0.5
NPM3-204ENST00000474993 RPS29P62273 56 aaKnown RBP11.91□□□□□ -0.5
NPM3-204ENST00000474993 Q6Q795 121 aa11.91□□□□□ -0.5
NPM3-204ENST00000474993 FAT3Q8TDW7 4589 aa11.91□□□□□ -0.5
NPM3-204ENST00000474993 LRP1Q07954 4544 aaKnown RBP11.91□□□□□ -0.5
NPM3-204ENST00000474993 MYCBP2O75592 4640 aa11.9□□□□□ -0.5
NPM3-204ENST00000474993 HRCT1Q6UXD1 115 aa11.9□□□□□ -0.5
NPM3-204ENST00000474993 A0A0G2JQZ4 141 aa11.89□□□□□ -0.51
NPM3-204ENST00000474993 C14orf132Q9NPU4 83 aa11.89□□□□□ -0.51
NPM3-204ENST00000474993 CCKP06307 115 aa11.88□□□□□ -0.51
NPM3-204ENST00000474993 LIMD2Q9BT23 127 aa11.88□□□□□ -0.51
NPM3-204ENST00000474993 TRBV7-7A0A0K0K1E9 115 aa11.86□□□□□ -0.51
NPM3-204ENST00000474993 ETDBQ3ZM63 59 aa11.85□□□□□ -0.51
NPM3-204ENST00000474993 Q6ZQT0 140 aa11.85□□□□□ -0.51
NPM3-204ENST00000474993 VPS25Q9BRG1 176 aa11.85□□□□□ -0.51
NPM3-204ENST00000474993 A0A1B0GW54 56 aa11.84□□□□□ -0.51
NPM3-204ENST00000474993 A0A1W2PNM2 257 aa11.84□□□□□ -0.51
NPM3-204ENST00000474993 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
NPM3-204ENST00000474993 Q5XG85 94 aa11.82□□□□□ -0.52
NPM3-204ENST00000474993 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
NPM3-204ENST00000474993 TNXBP22105 4242 aa11.77□□□□□ -0.52
NPM3-204ENST00000474993 A0A087WSZ3 146 aa11.77□□□□□ -0.53
NPM3-204ENST00000474993 ASB16-AS1Q495Z4 193 aa11.74□□□□□ -0.53
NPM3-204ENST00000474993 HERC1Q15751 4861 aa11.71□□□□□ -0.54
NPM3-204ENST00000474993 FP248Q71RG6 208 aaPredicted RBP11.65□□□□□ -0.54
NPM3-204ENST00000474993 NREPQ16612 68 aa11.64□□□□□ -0.55
NPM3-204ENST00000474993 C1orf195Q5TG92 126 aa11.64□□□□□ -0.55
NPM3-204ENST00000474993 RETNLBQ9BQ08 111 aa11.63□□□□□ -0.55
NPM3-204ENST00000474993 J3QR89 54 aa11.62□□□□□ -0.55
NPM3-204ENST00000474993 ACYP1P07311 99 aa11.62□□□□□ -0.55
NPM3-204ENST00000474993 UBR4Q5T4S7 5183 aa11.61□□□□□ -0.55
NPM3-204ENST00000474993 PRR4Q16378 134 aa11.6□□□□□ -0.55
NPM3-204ENST00000474993 UBL5Q9BZL1 73 aa11.59□□□□□ -0.55
NPM3-204ENST00000474993 FAM240AA0A1B0GVK7 77 aa11.58□□□□□ -0.56
NPM3-204ENST00000474993 J3KT08 172 aa11.57□□□□□ -0.56
NPM3-204ENST00000474993 LINC00472Q9H8W2 130 aa11.57□□□□□ -0.56
NPM3-204ENST00000474993 IGLV7-46A0A075B6I9 117 aa11.56□□□□□ -0.56
NPM3-204ENST00000474993 Q96NJ1 140 aa11.55□□□□□ -0.56
NPM3-204ENST00000474993 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
NPM3-204ENST00000474993 IGKV4-1P06312 121 aa11.53□□□□□ -0.56
NPM3-204ENST00000474993 Q6ZVQ6 151 aa11.52□□□□□ -0.57
NPM3-204ENST00000474993 SIGMAR1Q99720 223 aa11.51□□□□□ -0.57
NPM3-204ENST00000474993 DEFB116Q30KQ4 102 aa11.49□□□□□ -0.57
NPM3-204ENST00000474993 BPY2O14599 106 aa11.47□□□□□ -0.57
NPM3-204ENST00000474993 NDUFB1O75438 58 aa11.47□□□□□ -0.57
NPM3-204ENST00000474993 K7ERU9 68 aa11.46□□□□□ -0.57
NPM3-204ENST00000474993 TPRXLQ17RH7 258 aa11.43□□□□□ -0.58
NPM3-204ENST00000474993 A8MWP4 228 aa11.41□□□□□ -0.58
NPM3-204ENST00000474993 A0A1B0GVX0 72 aa11.38□□□□□ -0.59
NPM3-204ENST00000474993 KRTAP13-3Q3SY46 172 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms