RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 S100PP25815 95 aa-2.13□□□□□ -2.75
MDM2-216ENST00000471946 NBEAL2Q6ZNJ1 2754 aa-2.13□□□□□ -2.75
MDM2-216ENST00000471946 WIZO95785 1651 aa-2.14□□□□□ -2.75
MDM2-216ENST00000471946 TRIOO75962 3097 aa-2.14□□□□□ -2.75
MDM2-216ENST00000471946 TCEAL7Q9BRU2 100 aa-2.14□□□□□ -2.75
MDM2-216ENST00000471946 NIPBLQ6KC79 2804 aaeCLIP-2.14□□□□□ -2.75
MDM2-216ENST00000471946 TEX15Q9BXT5 2789 aa-2.15□□□□□ -2.75
MDM2-216ENST00000471946 ZNF831Q5JPB2 1677 aa-2.15□□□□□ -2.75
MDM2-216ENST00000471946 PLGLAQ15195 96 aa-2.15□□□□□ -2.75
MDM2-216ENST00000471946 CEP290O15078 2479 aa-2.15□□□□□ -2.75
MDM2-216ENST00000471946 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.15□□□□□ -2.75
MDM2-216ENST00000471946 SACSQ9NZJ4 4579 aa-2.16□□□□□ -2.75
MDM2-216ENST00000471946 HMGN2P05204 90 aaKnown RBP-2.16□□□□□ -2.76
MDM2-216ENST00000471946 MT1HP80294 61 aa-2.16□□□□□ -2.76
MDM2-216ENST00000471946 ATP6V1G2-DDX39BF2Z307 99 aa-2.17□□□□□ -2.76
MDM2-216ENST00000471946 PRO3102Q9H379 93 aa-2.17□□□□□ -2.76
MDM2-216ENST00000471946 RELNP78509 3460 aa-2.17□□□□□ -2.76
MDM2-216ENST00000471946 DDX60LQ5H9U9 1706 aaKnown RBP-2.18□□□□□ -2.76
MDM2-216ENST00000471946 DEPDC5O75140 1603 aa-2.18□□□□□ -2.76
MDM2-216ENST00000471946 DNHD1Q96M86 4753 aa-2.19□□□□□ -2.76
MDM2-216ENST00000471946 NEXMIFQ5QGS0 1516 aa-2.2□□□□□ -2.76
MDM2-216ENST00000471946 ACACBO00763 2458 aa-2.2□□□□□ -2.76
MDM2-216ENST00000471946 RBP2P50120 134 aa-2.2□□□□□ -2.76
MDM2-216ENST00000471946 CYB5AP00167 134 aa-2.21□□□□□ -2.76
MDM2-216ENST00000471946 C3orf79P0CE67 100 aa-2.21□□□□□ -2.76
MDM2-216ENST00000471946 LINC00158P58513 81 aa-2.21□□□□□ -2.76
MDM2-216ENST00000471946 WFDC9Q8NEX5 89 aa-2.21□□□□□ -2.76
MDM2-216ENST00000471946 S4R3F8 94 aa-2.21□□□□□ -2.76
MDM2-216ENST00000471946 RANBP2P49792 3224 aaKnown RBP-2.22□□□□□ -2.76
MDM2-216ENST00000471946 ARFGEF2Q9Y6D5 1785 aa-2.22□□□□□ -2.76
MDM2-216ENST00000471946 TRAV21A0A0B4J279 112 aa-2.22□□□□□ -2.76
MDM2-216ENST00000471946 PEA15Q15121 130 aa-2.22□□□□□ -2.76
MDM2-216ENST00000471946 NCMAPQ5T1S8 102 aa-2.22□□□□□ -2.76
MDM2-216ENST00000471946 ACBD7Q8N6N7 88 aa-2.22□□□□□ -2.76
MDM2-216ENST00000471946 CEP162Q5TB80 1403 aa-2.23□□□□□ -2.77
MDM2-216ENST00000471946 PRLHP81277 87 aa-2.24□□□□□ -2.77
MDM2-216ENST00000471946 CMYA5Q8N3K9 4069 aa-2.24□□□□□ -2.77
MDM2-216ENST00000471946 MAGI3Q5TCQ9 1506 aa-2.24□□□□□ -2.77
MDM2-216ENST00000471946 ANKRD36CQ5JPF3 1778 aa-2.25□□□□□ -2.77
MDM2-216ENST00000471946 SMIM11AP58511 58 aa-2.25□□□□□ -2.77
MDM2-216ENST00000471946 ABCC10Q5T3U5 1492 aa-2.26□□□□□ -2.77
MDM2-216ENST00000471946 PLCH1Q4KWH8 1693 aa-2.27□□□□□ -2.77
MDM2-216ENST00000471946 H0YAA0 97 aa-2.27□□□□□ -2.77
MDM2-216ENST00000471946 C20orf78Q9BR46 151 aa-2.27□□□□□ -2.77
MDM2-216ENST00000471946 DEFB110Q30KQ9 67 aa-2.29□□□□□ -2.78
MDM2-216ENST00000471946 PLIN4Q96Q06 1357 aa-2.29□□□□□ -2.78
MDM2-216ENST00000471946 GYPAP02724 150 aa-2.3□□□□□ -2.78
MDM2-216ENST00000471946 DYNC1H1Q14204 4646 aaKnown RBP-2.3□□□□□ -2.78
MDM2-216ENST00000471946 DNAH8Q96JB1 4490 aa-2.3□□□□□ -2.78
MDM2-216ENST00000471946 ITSN1Q15811 1721 aa-2.31□□□□□ -2.78
MDM2-216ENST00000471946 DIP2BQ9P265 1576 aa-2.31□□□□□ -2.78
MDM2-216ENST00000471946 RIF1Q5UIP0 2472 aaKnown RBP-2.31□□□□□ -2.78
MDM2-216ENST00000471946 M0R143 59 aa-2.32□□□□□ -2.78
MDM2-216ENST00000471946 PPLO60437 1756 aa-2.33□□□□□ -2.78
MDM2-216ENST00000471946 PIK3C2BO00750 1634 aa-2.33□□□□□ -2.78
MDM2-216ENST00000471946 NCOA2Q15596 1464 aa-2.33□□□□□ -2.78
MDM2-216ENST00000471946 USP9XQ93008 2570 aaPredicted RBP-2.34□□□□□ -2.78
MDM2-216ENST00000471946 MYMXA0A1B0GTQ4 84 aa-2.34□□□□□ -2.78
MDM2-216ENST00000471946 K7EP34 96 aa-2.34□□□□□ -2.78
MDM2-216ENST00000471946 DEFB1P60022 68 aa-2.34□□□□□ -2.78
MDM2-216ENST00000471946 FRYQ5TBA9 3013 aa-2.34□□□□□ -2.78
MDM2-216ENST00000471946 DNAH7Q8WXX0 4024 aa-2.34□□□□□ -2.78
MDM2-216ENST00000471946 LCE6AA0A183 80 aa-2.35□□□□□ -2.79
MDM2-216ENST00000471946 MAP3K4Q9Y6R4 1608 aa-2.36□□□□□ -2.79
MDM2-216ENST00000471946 CFAP43Q8NDM7 1665 aa-2.37□□□□□ -2.79
MDM2-216ENST00000471946 NDUFB1O75438 58 aa-2.37□□□□□ -2.79
MDM2-216ENST00000471946 URB2Q14146 1524 aaKnown RBP-2.37□□□□□ -2.79
MDM2-216ENST00000471946 ACYP1P07311 99 aa-2.38□□□□□ -2.79
MDM2-216ENST00000471946 KRTAP19-5Q3LI72 72 aa-2.38□□□□□ -2.79
MDM2-216ENST00000471946 DEFB106AQ8N104 65 aa-2.38□□□□□ -2.79
MDM2-216ENST00000471946 VPS8Q8N3P4 1428 aa-2.38□□□□□ -2.79
MDM2-216ENST00000471946 SNHG12Q9BXW3 62 aa-2.38□□□□□ -2.79
MDM2-216ENST00000471946 C5orf42Q9H799 3197 aa-2.38□□□□□ -2.79
MDM2-216ENST00000471946 KIF14Q15058 1648 aa-2.39□□□□□ -2.79
MDM2-216ENST00000471946 LYNX1G3V0Z9 82 aa-2.39□□□□□ -2.79
MDM2-216ENST00000471946 DEFB130BP0DP73 79 aa-2.39□□□□□ -2.79
MDM2-216ENST00000471946 DEFB130AP0DP74 79 aa-2.39□□□□□ -2.79
MDM2-216ENST00000471946 IAPPP10997 89 aa-2.39□□□□□ -2.79
MDM2-216ENST00000471946 COL12A1Q99715 3063 aa-2.39□□□□□ -2.79
MDM2-216ENST00000471946 PARP4Q9UKK3 1724 aaKnown RBP-2.39□□□□□ -2.79
MDM2-216ENST00000471946 SPENQ96T58 3664 aaKnown RBP-2.4□□□□□ -2.79
MDM2-216ENST00000471946 TLN2Q9Y4G6 2542 aa-2.4□□□□□ -2.79
MDM2-216ENST00000471946 RICTORQ6R327 1708 aa-2.41□□□□□ -2.8
MDM2-216ENST00000471946 IFI6P09912 130 aa-2.42□□□□□ -2.8
MDM2-216ENST00000471946 MT1XP80297 61 aa-2.42□□□□□ -2.8
MDM2-216ENST00000471946 TJP1Q07157 1748 aa-2.42□□□□□ -2.8
MDM2-216ENST00000471946 ZC3H13Q5T200 1668 aaKnown RBP-2.43□□□□□ -2.8
MDM2-216ENST00000471946 CEBPZOSA8MTT3 80 aa-2.43□□□□□ -2.8
MDM2-216ENST00000471946 CCDC88BA6NC98 1476 aa-2.44□□□□□ -2.8
MDM2-216ENST00000471946 RABAC1Q9UI14 185 aa-2.44□□□□□ -2.8
MDM2-216ENST00000471946 ABCC3O15438 1527 aa-2.45□□□□□ -2.8
MDM2-216ENST00000471946 CELSR3Q9NYQ7 3312 aa-2.45□□□□□ -2.8
MDM2-216ENST00000471946 SRCAPQ6ZRS2 3230 aa-2.45□□□□□ -2.8
MDM2-216ENST00000471946 THOC2Q8NI27 1593 aaKnown RBP-2.45□□□□□ -2.8
MDM2-216ENST00000471946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.46□□□□□ -2.8
MDM2-216ENST00000471946 SNRPFP62306 86 aaKnown RBP-2.47□□□□□ -2.8
MDM2-216ENST00000471946 ITSN2Q9NZM3 1697 aa-2.47□□□□□ -2.81
MDM2-216ENST00000471946 PKIAP61925 76 aa-2.48□□□□□ -2.81
MDM2-216ENST00000471946 LINC00643Q86TS7 51 aa-2.48□□□□□ -2.81
MDM2-216ENST00000471946 TOGARAM1Q9Y4F4 1720 aa-2.48□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms