RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 PLXNC1O60486 1568 aa-1.7□□□□□ -2.68
RBM39-228ENST00000471635 RANBP2P49792 3224 aaKnown RBP-1.7□□□□□ -2.68
RBM39-228ENST00000471635 IQCF6A8MYZ5 107 aa-1.71□□□□□ -2.68
RBM39-228ENST00000471635 FANCAO15360 1455 aa-1.71□□□□□ -2.68
RBM39-228ENST00000471635 CHD7Q9P2D1 2997 aa-1.71□□□□□ -2.68
RBM39-228ENST00000471635 USP32Q8NFA0 1604 aa-1.72□□□□□ -2.68
RBM39-228ENST00000471635 A0A1B0GUT8 65 aa-1.72□□□□□ -2.68
RBM39-228ENST00000471635 LINC00032P0C843 101 aa-1.72□□□□□ -2.68
RBM39-228ENST00000471635 C14orf144Q96I85 54 aa-1.72□□□□□ -2.68
RBM39-228ENST00000471635 ATP7BP35670 1465 aa-1.72□□□□□ -2.68
RBM39-228ENST00000471635 TIAM2Q8IVF5 1701 aa-1.72□□□□□ -2.69
RBM39-228ENST00000471635 SRCAPQ6ZRS2 3230 aa-1.73□□□□□ -2.69
RBM39-228ENST00000471635 SUPT6HQ7KZ85 1726 aaKnown RBP-1.73□□□□□ -2.69
RBM39-228ENST00000471635 C3orf79P0CE67 100 aa-1.73□□□□□ -2.69
RBM39-228ENST00000471635 PRLHP81277 87 aa-1.73□□□□□ -2.69
RBM39-228ENST00000471635 PRO3102Q9H379 93 aa-1.73□□□□□ -2.69
RBM39-228ENST00000471635 ITPR1Q14643 2758 aa-1.73□□□□□ -2.69
RBM39-228ENST00000471635 COL6A5A8TX70 2615 aa-1.74□□□□□ -2.69
RBM39-228ENST00000471635 MT1EP04732 61 aa-1.74□□□□□ -2.69
RBM39-228ENST00000471635 LINC00158P58513 81 aa-1.74□□□□□ -2.69
RBM39-228ENST00000471635 DPY30Q9C005 99 aa-1.74□□□□□ -2.69
RBM39-228ENST00000471635 TLN2Q9Y4G6 2542 aa-1.75□□□□□ -2.69
RBM39-228ENST00000471635 HMGN2P05204 90 aaKnown RBP-1.75□□□□□ -2.69
RBM39-228ENST00000471635 SARNPP82979 210 aaKnown RBP-1.75□□□□□ -2.69
RBM39-228ENST00000471635 PLGLAQ15195 96 aa-1.75□□□□□ -2.69
RBM39-228ENST00000471635 ATP10BO94823 1461 aa-1.75□□□□□ -2.69
RBM39-228ENST00000471635 WIZO95785 1651 aa-1.76□□□□□ -2.69
RBM39-228ENST00000471635 POLR1AO95602 1720 aaPredicted RBP-1.76□□□□□ -2.69
RBM39-228ENST00000471635 S100PP25815 95 aa-1.76□□□□□ -2.69
RBM39-228ENST00000471635 ABCA13Q86UQ4 5058 aa-1.76□□□□□ -2.69
RBM39-228ENST00000471635 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.76□□□□□ -2.69
RBM39-228ENST00000471635 NESP48681 1621 aa-1.77□□□□□ -2.69
RBM39-228ENST00000471635 TRAV21A0A0B4J279 112 aa-1.77□□□□□ -2.69
RBM39-228ENST00000471635 CNTLNQ9NXG0 1405 aa-1.77□□□□□ -2.69
RBM39-228ENST00000471635 CSMD1Q96PZ7 3565 aa-1.77□□□□□ -2.69
RBM39-228ENST00000471635 RGPD3A6NKT7 1758 aaPredicted RBP-1.77□□□□□ -2.69
RBM39-228ENST00000471635 RGPD4Q7Z3J3 1758 aa-1.77□□□□□ -2.69
RBM39-228ENST00000471635 CEP295Q9C0D2 2601 aa-1.78□□□□□ -2.69
RBM39-228ENST00000471635 SMR3BP02814 79 aaPredicted RBP-1.78□□□□□ -2.69
RBM39-228ENST00000471635 CLPSL2Q6UWE3 100 aa-1.78□□□□□ -2.69
RBM39-228ENST00000471635 MT1LQ93083 61 aa-1.78□□□□□ -2.69
RBM39-228ENST00000471635 NWD1Q149M9 1564 aa-1.78□□□□□ -2.69
RBM39-228ENST00000471635 EYSQ5T1H1 3165 aa-1.78□□□□□ -2.69
RBM39-228ENST00000471635 UBR1Q8IWV7 1749 aa-1.79□□□□□ -2.7
RBM39-228ENST00000471635 NEXMIFQ5QGS0 1516 aa-1.79□□□□□ -2.7
RBM39-228ENST00000471635 TCEAL7Q9BRU2 100 aa-1.79□□□□□ -2.7
RBM39-228ENST00000471635 MYO3AQ8NEV4 1616 aa-1.8□□□□□ -2.7
RBM39-228ENST00000471635 ATP6V1G2-DDX39BF2Z307 99 aa-1.8□□□□□ -2.7
RBM39-228ENST00000471635 CYB5AP00167 134 aa-1.8□□□□□ -2.7
RBM39-228ENST00000471635 WFDC9Q8NEX5 89 aa-1.8□□□□□ -2.7
RBM39-228ENST00000471635 LTN1O94822 1766 aa-1.8□□□□□ -2.7
RBM39-228ENST00000471635 DOT1LQ8TEK3 1739 aa-1.8□□□□□ -2.7
RBM39-228ENST00000471635 NCMAPQ5T1S8 102 aa-1.81□□□□□ -2.7
RBM39-228ENST00000471635 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.81□□□□□ -2.7
RBM39-228ENST00000471635 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.81□□□□□ -2.7
RBM39-228ENST00000471635 RBP2P50120 134 aa-1.82□□□□□ -2.7
RBM39-228ENST00000471635 SMIM11AP58511 58 aa-1.82□□□□□ -2.7
RBM39-228ENST00000471635 PEA15Q15121 130 aa-1.82□□□□□ -2.7
RBM39-228ENST00000471635 ACBD7Q8N6N7 88 aa-1.82□□□□□ -2.7
RBM39-228ENST00000471635 DEPDC5O75140 1603 aa-1.82□□□□□ -2.7
RBM39-228ENST00000471635 C20orf78Q9BR46 151 aa-1.83□□□□□ -2.7
RBM39-228ENST00000471635 MYO9AB2RTY4 2548 aa-1.83□□□□□ -2.7
RBM39-228ENST00000471635 BPTFQ12830 3046 aa-1.83□□□□□ -2.7
RBM39-228ENST00000471635 SMG1Q96Q15 3661 aaKnown RBP-1.84□□□□□ -2.7
RBM39-228ENST00000471635 MT1MQ8N339 61 aa-1.84□□□□□ -2.7
RBM39-228ENST00000471635 LRBAP50851 2863 aa-1.84□□□□□ -2.7
RBM39-228ENST00000471635 MT2AP02795 61 aa-1.85□□□□□ -2.71
RBM39-228ENST00000471635 MT1GP13640 62 aa-1.85□□□□□ -2.71
RBM39-228ENST00000471635 ZNF831Q5JPB2 1677 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 DNAH17Q9UFH2 4485 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 LCE6AA0A183 80 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 LYNX1G3V0Z9 82 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 DEFB130BP0DP73 79 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 DEFB130AP0DP74 79 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 CEP162Q5TB80 1403 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 PLIN4Q96Q06 1357 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 MAGI3Q5TCQ9 1506 aa-1.86□□□□□ -2.71
RBM39-228ENST00000471635 MYMXA0A1B0GTQ4 84 aa-1.87□□□□□ -2.71
RBM39-228ENST00000471635 GYPAP02724 150 aa-1.87□□□□□ -2.71
RBM39-228ENST00000471635 MT1BP07438 61 aa-1.87□□□□□ -2.71
RBM39-228ENST00000471635 ANKRD26Q9UPS8 1709 aa-1.87□□□□□ -2.71
RBM39-228ENST00000471635 ABCC10Q5T3U5 1492 aa-1.88□□□□□ -2.71
RBM39-228ENST00000471635 KRTAP8-1Q8IUC2 63 aa-1.88□□□□□ -2.71
RBM39-228ENST00000471635 DEFB106AQ8N104 65 aa-1.88□□□□□ -2.71
RBM39-228ENST00000471635 CFAP46Q8IYW2 2715 aa-1.88□□□□□ -2.71
RBM39-228ENST00000471635 TRRAPQ9Y4A5 3859 aa-1.88□□□□□ -2.71
RBM39-228ENST00000471635 TMEM131LA2VDJ0 1609 aa-1.88□□□□□ -2.71
RBM39-228ENST00000471635 M0R143 59 aa-1.89□□□□□ -2.71
RBM39-228ENST00000471635 TNP1P09430 55 aa-1.89□□□□□ -2.71
RBM39-228ENST00000471635 IAPPP10997 89 aa-1.89□□□□□ -2.71
RBM39-228ENST00000471635 SPTBN5Q9NRC6 3674 aaKnown RBP-1.89□□□□□ -2.71
RBM39-228ENST00000471635 DNAH5Q8TE73 4624 aa-1.89□□□□□ -2.71
RBM39-228ENST00000471635 DNAH10Q8IVF4 4471 aa-1.89□□□□□ -2.71
RBM39-228ENST00000471635 NCOA2Q15596 1464 aa-1.89□□□□□ -2.71
RBM39-228ENST00000471635 MMP24-AS1A0A0U1RRL7 71 aa-1.9□□□□□ -2.71
RBM39-228ENST00000471635 ACYP1P07311 99 aa-1.9□□□□□ -2.71
RBM39-228ENST00000471635 IFI6P09912 130 aa-1.9□□□□□ -2.71
RBM39-228ENST00000471635 SPTAN1Q13813 2472 aaKnown RBP-1.91□□□□□ -2.71
RBM39-228ENST00000471635 NDUFB1O75438 58 aa-1.91□□□□□ -2.72
RBM39-228ENST00000471635 DIP2BQ9P265 1576 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms