RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 LYRM7Q5U5X0 104 aa7.38□□□□□ -1.23
SPTLC1-204ENST00000469778 C3orf22Q8N5N4 141 aa7.38□□□□□ -1.23
SPTLC1-204ENST00000469778 IGLV9-49A0A0B4J1Y8 123 aa7.37□□□□□ -1.23
SPTLC1-204ENST00000469778 F8WEM9 126 aa7.37□□□□□ -1.23
SPTLC1-204ENST00000469778 SPINK1P00995 79 aa7.37□□□□□ -1.23
SPTLC1-204ENST00000469778 TRACP01848 142 aa7.37□□□□□ -1.23
SPTLC1-204ENST00000469778 MOBPQ13875 183 aa7.37□□□□□ -1.23
SPTLC1-204ENST00000469778 SMIM29Q86T20 159 aa7.37□□□□□ -1.23
SPTLC1-204ENST00000469778 FAM218AQ96MZ4 157 aa7.37□□□□□ -1.23
SPTLC1-204ENST00000469778 SNHG12Q9BXW3 62 aa7.37□□□□□ -1.23
SPTLC1-204ENST00000469778 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-204ENST00000469778 BATFQ16520 125 aa7.36□□□□□ -1.23
SPTLC1-204ENST00000469778 C9orf153Q5TBE3 101 aa7.36□□□□□ -1.23
SPTLC1-204ENST00000469778 CD164Q04900 197 aa7.34□□□□□ -1.23
SPTLC1-204ENST00000469778 CLEC2BQ92478 149 aa7.34□□□□□ -1.23
SPTLC1-204ENST00000469778 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
SPTLC1-204ENST00000469778 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
SPTLC1-204ENST00000469778 TMEM256-PLSCR3K7ERE1 68 aa7.33□□□□□ -1.24
SPTLC1-204ENST00000469778 LST1O00453 97 aa7.33□□□□□ -1.24
SPTLC1-204ENST00000469778 Q6JHZ5 121 aa7.33□□□□□ -1.24
SPTLC1-204ENST00000469778 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
SPTLC1-204ENST00000469778 C9orf118A6NHY6 69 aa7.32□□□□□ -1.24
SPTLC1-204ENST00000469778 ATXN8Q156A1 80 aa7.32□□□□□ -1.24
SPTLC1-204ENST00000469778 HERC1Q15751 4861 aa7.32□□□□□ -1.24
SPTLC1-204ENST00000469778 COL5A1-AS1Q5SY13 56 aa7.31□□□□□ -1.24
SPTLC1-204ENST00000469778 NDUFV3P56181 108 aaKnown RBP7.3□□□□□ -1.24
SPTLC1-204ENST00000469778 FABP2P12104 132 aa7.29□□□□□ -1.24
SPTLC1-204ENST00000469778 H3BUT2 72 aa7.28□□□□□ -1.24
SPTLC1-204ENST00000469778 TAX1BP3O14907 124 aa7.28□□□□□ -1.24
SPTLC1-204ENST00000469778 UBE2V1Q13404 147 aa7.28□□□□□ -1.24
SPTLC1-204ENST00000469778 LIMD2Q9BT23 127 aa7.27□□□□□ -1.25
SPTLC1-204ENST00000469778 A0A1W2PPM0 123 aa7.26□□□□□ -1.25
SPTLC1-204ENST00000469778 TCL1BO95988 128 aa7.26□□□□□ -1.25
SPTLC1-204ENST00000469778 PCP4L1A6NKN8 68 aa7.25□□□□□ -1.25
SPTLC1-204ENST00000469778 H3BMG7 143 aa7.25□□□□□ -1.25
SPTLC1-204ENST00000469778 Q5XG85 94 aa7.25□□□□□ -1.25
SPTLC1-204ENST00000469778 NAA38Q9BRA0 125 aaKnown RBP7.25□□□□□ -1.25
SPTLC1-204ENST00000469778 BAALC-AS2P0C853 105 aa7.24□□□□□ -1.25
SPTLC1-204ENST00000469778 FP248Q71RG6 208 aaPredicted RBP7.23□□□□□ -1.25
SPTLC1-204ENST00000469778 Q6Q795 121 aa7.22□□□□□ -1.25
SPTLC1-204ENST00000469778 IGFL1Q6UW32 110 aa7.22□□□□□ -1.25
SPTLC1-204ENST00000469778 TEN1Q86WV5 123 aa7.21□□□□□ -1.26
SPTLC1-204ENST00000469778 ANKRD29Q8N6D5 301 aa7.21□□□□□ -1.26
SPTLC1-204ENST00000469778 JMJD7-PLA2G4BH0Y9G9 81 aa7.2□□□□□ -1.26
SPTLC1-204ENST00000469778 RBM3P98179 157 aaKnown RBP7.19□□□□□ -1.26
SPTLC1-204ENST00000469778 PRR4Q16378 134 aa7.19□□□□□ -1.26
SPTLC1-204ENST00000469778 TRBV7-7A0A0K0K1E9 115 aa7.18□□□□□ -1.26
SPTLC1-204ENST00000469778 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
SPTLC1-204ENST00000469778 HRCT1Q6UXD1 115 aa7.18□□□□□ -1.26
SPTLC1-204ENST00000469778 C9JAW5 83 aa7.17□□□□□ -1.26
SPTLC1-204ENST00000469778 H3BT86 120 aa7.17□□□□□ -1.26
SPTLC1-204ENST00000469778 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
SPTLC1-204ENST00000469778 DSCR8Q96T75 97 aa7.17□□□□□ -1.26
SPTLC1-204ENST00000469778 SS18L2Q9UHA2 77 aa7.17□□□□□ -1.26
SPTLC1-204ENST00000469778 SPCS1Q9Y6A9 102 aa7.17□□□□□ -1.26
SPTLC1-204ENST00000469778 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
SPTLC1-204ENST00000469778 PDE6GP18545 87 aa7.16□□□□□ -1.26
SPTLC1-204ENST00000469778 IGLV7-46A0A075B6I9 117 aa7.15□□□□□ -1.26
SPTLC1-204ENST00000469778 TRBV7-4A0A0J9YYF1 115 aa7.15□□□□□ -1.26
SPTLC1-204ENST00000469778 A0A0G2JQZ4 141 aa7.14□□□□□ -1.27
SPTLC1-204ENST00000469778 A0A1B0GW54 56 aa7.14□□□□□ -1.27
SPTLC1-204ENST00000469778 GTF2H5Q6ZYL4 71 aa7.14□□□□□ -1.27
SPTLC1-204ENST00000469778 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
SPTLC1-204ENST00000469778 CCKP06307 115 aa7.12□□□□□ -1.27
SPTLC1-204ENST00000469778 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
SPTLC1-204ENST00000469778 OBSCN-AS1Q96MR7 158 aa7.12□□□□□ -1.27
SPTLC1-204ENST00000469778 LOC110117498A0A087WWA1 95 aa7.11□□□□□ -1.27
SPTLC1-204ENST00000469778 K7EP34 96 aa7.11□□□□□ -1.27
SPTLC1-204ENST00000469778 A0A1W2PNM2 257 aa7.1□□□□□ -1.27
SPTLC1-204ENST00000469778 C1orf195Q5TG92 126 aa7.1□□□□□ -1.27
SPTLC1-204ENST00000469778 A0A087WSZ3 146 aa7.07□□□□□ -1.28
SPTLC1-204ENST00000469778 A0A1B0GV72 72 aa7.06□□□□□ -1.28
SPTLC1-204ENST00000469778 F8W1H4 67 aa7.06□□□□□ -1.28
SPTLC1-204ENST00000469778 Q6ZQT0 140 aa7.06□□□□□ -1.28
SPTLC1-204ENST00000469778 KRTAP13-3Q3SY46 172 aa7.04□□□□□ -1.28
SPTLC1-204ENST00000469778 CDIP1Q9H305 208 aa7.04□□□□□ -1.28
SPTLC1-204ENST00000469778 VPS25Q9BRG1 176 aa7.03□□□□□ -1.28
SPTLC1-204ENST00000469778 C14orf132Q9NPU4 83 aa7.03□□□□□ -1.28
SPTLC1-204ENST00000469778 PRO0461Q9UI25 63 aa7.03□□□□□ -1.28
SPTLC1-204ENST00000469778 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-204ENST00000469778 MTURNQ8N3F0 131 aa7.01□□□□□ -1.29
SPTLC1-204ENST00000469778 J3KT08 172 aa6.99□□□□□ -1.29
SPTLC1-204ENST00000469778 LINC00472Q9H8W2 130 aa6.99□□□□□ -1.29
SPTLC1-204ENST00000469778 LRP2P98164 4655 aa6.97□□□□□ -1.29
SPTLC1-204ENST00000469778 Q96NJ1 140 aa6.97□□□□□ -1.29
SPTLC1-204ENST00000469778 IGKV4-1P06312 121 aa6.95□□□□□ -1.3
SPTLC1-204ENST00000469778 NREPQ16612 68 aa6.94□□□□□ -1.3
SPTLC1-204ENST00000469778 XP32Q5T750 250 aa6.94□□□□□ -1.3
SPTLC1-204ENST00000469778 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
SPTLC1-204ENST00000469778 UBR4Q5T4S7 5183 aa6.92□□□□□ -1.3
SPTLC1-204ENST00000469778 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
SPTLC1-204ENST00000469778 SIGMAR1Q99720 223 aa6.91□□□□□ -1.3
SPTLC1-204ENST00000469778 C9orf92A6NGG3 77 aa6.9□□□□□ -1.3
SPTLC1-204ENST00000469778 NDUFB1O75438 58 aa6.9□□□□□ -1.3
SPTLC1-204ENST00000469778 LPAP08519 4548 aa6.9□□□□□ -1.31
SPTLC1-204ENST00000469778 LINC00313P59037 77 aa6.88□□□□□ -1.31
SPTLC1-204ENST00000469778 A0A1B0GV90 55 aa6.87□□□□□ -1.31
SPTLC1-204ENST00000469778 C8orf87E5RJ46 101 aa6.87□□□□□ -1.31
SPTLC1-204ENST00000469778 DEFB116Q30KQ4 102 aa6.87□□□□□ -1.31
SPTLC1-204ENST00000469778 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms