RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 RTL8CO15255 209 aa5.27□□□□□ -1.57
BRCA1-208ENST00000468300 Q1RN00 199 aa5.27□□□□□ -1.57
BRCA1-208ENST00000468300 A0A096LNI7 61 aa5.26□□□□□ -1.57
BRCA1-208ENST00000468300 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
BRCA1-208ENST00000468300 C1orf134Q5TEV5 83 aa5.26□□□□□ -1.57
BRCA1-208ENST00000468300 C9orf163Q8N9P6 203 aa5.26□□□□□ -1.57
BRCA1-208ENST00000468300 PANO1I0J062 215 aa5.25□□□□□ -1.57
BRCA1-208ENST00000468300 C14orf177Q52M58 125 aa5.25□□□□□ -1.57
BRCA1-208ENST00000468300 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
BRCA1-208ENST00000468300 SNURFQ9Y675 71 aa5.25□□□□□ -1.57
BRCA1-208ENST00000468300 CXCL6P80162 114 aa5.24□□□□□ -1.57
BRCA1-208ENST00000468300 TRBV10-3A0A0K0K1G6 114 aa5.24□□□□□ -1.57
BRCA1-208ENST00000468300 A8MU10 97 aa5.24□□□□□ -1.57
BRCA1-208ENST00000468300 C16orf90A8MZG2 172 aa5.24□□□□□ -1.57
BRCA1-208ENST00000468300 A0A1W2PNN7 141 aa5.23□□□□□ -1.57
BRCA1-208ENST00000468300 PKHD1P08F94 4074 aa5.23□□□□□ -1.57
BRCA1-208ENST00000468300 CHTF8P0CG12 524 aa5.23□□□□□ -1.57
BRCA1-208ENST00000468300 ATP11AUNQ6ZP68 121 aa5.23□□□□□ -1.57
BRCA1-208ENST00000468300 SCXQ7RTU7 201 aa5.23□□□□□ -1.57
BRCA1-208ENST00000468300 C7orf33Q8WU49 177 aa5.22□□□□□ -1.57
BRCA1-208ENST00000468300 LINC01600Q96MT4 127 aa5.22□□□□□ -1.57
BRCA1-208ENST00000468300 A0A087WYN8 130 aa5.21□□□□□ -1.57
BRCA1-208ENST00000468300 LCE6AA0A183 80 aa5.21□□□□□ -1.57
BRCA1-208ENST00000468300 A6NN06 94 aa5.21□□□□□ -1.58
BRCA1-208ENST00000468300 KRTAP10-2P60368 255 aa5.21□□□□□ -1.58
BRCA1-208ENST00000468300 KRTAP11-1Q8IUC1 163 aa5.21□□□□□ -1.58
BRCA1-208ENST00000468300 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
BRCA1-208ENST00000468300 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-208ENST00000468300 RYR3Q15413 4870 aa5.21□□□□□ -1.58
BRCA1-208ENST00000468300 TRAV23DV6A0A075B6W5 121 aa5.21□□□□□ -1.58
BRCA1-208ENST00000468300 IGLV1-50A0A075B6I6 118 aa5.2□□□□□ -1.58
BRCA1-208ENST00000468300 KRTAP4-16G5E9R7 235 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-208ENST00000468300 NDUFC1O43677 76 aa5.2□□□□□ -1.58
BRCA1-208ENST00000468300 BAALC-AS2P0C853 105 aa5.2□□□□□ -1.58
BRCA1-208ENST00000468300 KCNQ1DNQ9H478 68 aa5.2□□□□□ -1.58
BRCA1-208ENST00000468300 IGKV2-24A0A0C4DH68 120 aa5.2□□□□□ -1.58
BRCA1-208ENST00000468300 LINC00167Q96N53 147 aa5.2□□□□□ -1.58
BRCA1-208ENST00000468300 SPACA4Q8TDM5 124 aa5.19□□□□□ -1.58
BRCA1-208ENST00000468300 HCG22E2RYF7 251 aa5.19□□□□□ -1.58
BRCA1-208ENST00000468300 COX6CP09669 75 aa5.19□□□□□ -1.58
BRCA1-208ENST00000468300 KLKP1Q107X0 134 aa5.19□□□□□ -1.58
BRCA1-208ENST00000468300 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
BRCA1-208ENST00000468300 RPL37AP8A6NKH3 93 aa5.18□□□□□ -1.58
BRCA1-208ENST00000468300 SPRR1AP35321 89 aa5.18□□□□□ -1.58
BRCA1-208ENST00000468300 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
BRCA1-208ENST00000468300 Q1T7F1 81 aa5.17□□□□□ -1.58
BRCA1-208ENST00000468300 H0YGX0 51 aa5.17□□□□□ -1.58
BRCA1-208ENST00000468300 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
BRCA1-208ENST00000468300 PRAC1Q96KF2 57 aa5.17□□□□□ -1.58
BRCA1-208ENST00000468300 ELOF1P60002 83 aaKnown RBP5.17□□□□□ -1.58
BRCA1-208ENST00000468300 LINC00575Q6W349 94 aa5.17□□□□□ -1.58
BRCA1-208ENST00000468300 IGLV5-52A0A0A0MRZ9 124 aa5.16□□□□□ -1.58
BRCA1-208ENST00000468300 TRAV22A0A0B4J277 110 aa5.15□□□□□ -1.58
BRCA1-208ENST00000468300 CDK2AP2O75956 126 aa5.15□□□□□ -1.58
BRCA1-208ENST00000468300 Q6JHZ5 121 aa5.15□□□□□ -1.58
BRCA1-208ENST00000468300 TRAV7A0A075B6U4 112 aa5.15□□□□□ -1.59
BRCA1-208ENST00000468300 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
BRCA1-208ENST00000468300 IGLV9-49A0A0B4J1Y8 123 aa5.14□□□□□ -1.59
BRCA1-208ENST00000468300 Q9BRP9 147 aa5.14□□□□□ -1.59
BRCA1-208ENST00000468300 A0A1B0GVY2 172 aa5.14□□□□□ -1.59
BRCA1-208ENST00000468300 KRTAP10-1P60331 282 aa5.13□□□□□ -1.59
BRCA1-208ENST00000468300 Q6ZSA8 131 aa5.13□□□□□ -1.59
BRCA1-208ENST00000468300 PLAC8Q9NZF1 115 aa5.13□□□□□ -1.59
BRCA1-208ENST00000468300 COX7BP24311 80 aa5.13□□□□□ -1.59
BRCA1-208ENST00000468300 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
BRCA1-208ENST00000468300 DNAL4O96015 105 aa5.12□□□□□ -1.59
BRCA1-208ENST00000468300 DYNC1H1Q14204 4646 aaKnown RBP5.12□□□□□ -1.59
BRCA1-208ENST00000468300 SRRM2Q9UQ35 2752 aaKnown RBP5.12□□□□□ -1.59
BRCA1-208ENST00000468300 Q6ZRX8 168 aa5.12□□□□□ -1.59
BRCA1-208ENST00000468300 LINC01547P58512 204 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-208ENST00000468300 ERC2-IT1O76042 136 aa5.1□□□□□ -1.59
BRCA1-208ENST00000468300 KRTAP13-1Q8IUC0 172 aa5.1□□□□□ -1.59
BRCA1-208ENST00000468300 OBSCN-AS1Q96MR7 158 aa5.1□□□□□ -1.59
BRCA1-208ENST00000468300 VPS13BQ7Z7G8 4022 aa5.1□□□□□ -1.59
BRCA1-208ENST00000468300 A6NED7 52 aa5.1□□□□□ -1.59
BRCA1-208ENST00000468300 APOBP04114 4563 aaKnown RBP5.09□□□□□ -1.59
BRCA1-208ENST00000468300 Q6ZQY7 126 aa5.08□□□□□ -1.6
BRCA1-208ENST00000468300 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
BRCA1-208ENST00000468300 ORMDL1Q9P0S3 153 aa5.08□□□□□ -1.6
BRCA1-208ENST00000468300 KRTAP16-1A8MUX0 517 aa5.07□□□□□ -1.6
BRCA1-208ENST00000468300 PRLHP81277 87 aa5.07□□□□□ -1.6
BRCA1-208ENST00000468300 ETDCA0A1B0GVM5 59 aa5.06□□□□□ -1.6
BRCA1-208ENST00000468300 HAMPP81172 84 aa5.06□□□□□ -1.6
BRCA1-208ENST00000468300 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-208ENST00000468300 ST20-AS1Q8NBB2 130 aa5.06□□□□□ -1.6
BRCA1-208ENST00000468300 Q5VV11 94 aa5.06□□□□□ -1.6
BRCA1-208ENST00000468300 Q8N377 158 aa5.06□□□□□ -1.6
BRCA1-208ENST00000468300 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
BRCA1-208ENST00000468300 FAM229AH3BQW9 127 aa5.05□□□□□ -1.6
BRCA1-208ENST00000468300 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
BRCA1-208ENST00000468300 IGLV5-48A0A075B6I7 105 aa5.05□□□□□ -1.6
BRCA1-208ENST00000468300 BCE1O60756 84 aa5.05□□□□□ -1.6
BRCA1-208ENST00000468300 hDV103S1A0JD37 113 aa5.04□□□□□ -1.6
BRCA1-208ENST00000468300 LINC00846Q9NV44 126 aa5.04□□□□□ -1.6
BRCA1-208ENST00000468300 SMIM29Q86T20 159 aa5.03□□□□□ -1.6
BRCA1-208ENST00000468300 MOBPQ13875 183 aa5.02□□□□□ -1.61
BRCA1-208ENST00000468300 C14orf132Q9NPU4 83 aa5.01□□□□□ -1.61
BRCA1-208ENST00000468300 TMEM254Q8TBM7 123 aa5.01□□□□□ -1.61
BRCA1-208ENST00000468300 PRR15LQ9BU68 103 aa5.01□□□□□ -1.61
BRCA1-208ENST00000468300 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms