RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FLGP20930 4061 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-210ENST00000468211 VAMP3Q15836 100 aa12.95□□□□□ -0.34
PTCH1-210ENST00000468211 hADV29S1A0JD25 119 aa12.92□□□□□ -0.34
PTCH1-210ENST00000468211 IGFL1Q6UW32 110 aa12.92□□□□□ -0.34
PTCH1-210ENST00000468211 HIST3H2BBQ8N257 126 aa12.92□□□□□ -0.34
PTCH1-210ENST00000468211 HIST1H2BLQ99880 126 aa12.92□□□□□ -0.34
PTCH1-210ENST00000468211 TRBV7-7A0A0K0K1E9 115 aa12.89□□□□□ -0.35
PTCH1-210ENST00000468211 Q6JHZ5 121 aa12.89□□□□□ -0.35
PTCH1-210ENST00000468211 CLEC2BQ92478 149 aa12.89□□□□□ -0.35
PTCH1-210ENST00000468211 OCIAD2Q56VL3 154 aa12.87□□□□□ -0.35
PTCH1-210ENST00000468211 COX6B2Q6YFQ2 88 aa12.87□□□□□ -0.35
PTCH1-210ENST00000468211 M0R2T5 61 aa12.86□□□□□ -0.35
PTCH1-210ENST00000468211 C12orf57Q99622 126 aa12.85□□□□□ -0.35
PTCH1-210ENST00000468211 HSBP1L1C9JCN9 74 aa12.84□□□□□ -0.35
PTCH1-210ENST00000468211 S100A2P29034 98 aa12.83□□□□□ -0.36
PTCH1-210ENST00000468211 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-210ENST00000468211 OBSCN-AS1Q96MR7 158 aa12.81□□□□□ -0.36
PTCH1-210ENST00000468211 H3BUT2 72 aa12.78□□□□□ -0.36
PTCH1-210ENST00000468211 HIST1H4GQ99525 98 aa12.76□□□□□ -0.37
PTCH1-210ENST00000468211 BVES-AS1Q5T3Y7 98 aa12.75□□□□□ -0.37
PTCH1-210ENST00000468211 Q75L30 129 aa12.75□□□□□ -0.37
PTCH1-210ENST00000468211 PPDPFLQ8WWR9 84 aa12.75□□□□□ -0.37
PTCH1-210ENST00000468211 SNHG12Q9BXW3 62 aa12.75□□□□□ -0.37
PTCH1-210ENST00000468211 ATP11AUNQ6ZP68 121 aa12.71□□□□□ -0.37
PTCH1-210ENST00000468211 LST1O00453 97 aa12.7□□□□□ -0.38
PTCH1-210ENST00000468211 COX8AP10176 69 aa12.7□□□□□ -0.38
PTCH1-210ENST00000468211 SCGB1D1O95968 90 aa12.69□□□□□ -0.38
PTCH1-210ENST00000468211 CFC1P0CG37 223 aa12.68□□□□□ -0.38
PTCH1-210ENST00000468211 Q6Q795 121 aa12.68□□□□□ -0.38
PTCH1-210ENST00000468211 S100A6P06703 90 aa12.67□□□□□ -0.38
PTCH1-210ENST00000468211 Q96NJ1 140 aa12.67□□□□□ -0.38
PTCH1-210ENST00000468211 FAM218AQ96MZ4 157 aa12.65□□□□□ -0.38
PTCH1-210ENST00000468211 DLEU1O43261 78 aa12.63□□□□□ -0.39
PTCH1-210ENST00000468211 NDUFV3P56181 108 aaKnown RBP12.6□□□□□ -0.39
PTCH1-210ENST00000468211 RAB37Q96AX2 223 aa12.6□□□□□ -0.39
PTCH1-210ENST00000468211 C14orf144Q96I85 54 aa12.6□□□□□ -0.39
PTCH1-210ENST00000468211 TEN1Q86WV5 123 aa12.59□□□□□ -0.39
PTCH1-210ENST00000468211 C20orf166-AS1Q96NR2 134 aa12.59□□□□□ -0.39
PTCH1-210ENST00000468211 SS18L2Q9UHA2 77 aa12.59□□□□□ -0.39
PTCH1-210ENST00000468211 H0YGX0 51 aa12.57□□□□□ -0.4
PTCH1-210ENST00000468211 A0A087WSZ3 146 aa12.56□□□□□ -0.4
PTCH1-210ENST00000468211 A0A0B4J2C4 111 aa12.56□□□□□ -0.4
PTCH1-210ENST00000468211 A8MUU9 505 aa12.56□□□□□ -0.4
PTCH1-210ENST00000468211 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
PTCH1-210ENST00000468211 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
PTCH1-210ENST00000468211 S100A1P23297 94 aa12.52□□□□□ -0.41
PTCH1-210ENST00000468211 PAM16Q9Y3D7 125 aa12.52□□□□□ -0.41
PTCH1-210ENST00000468211 H3BMG7 143 aa12.51□□□□□ -0.41
PTCH1-210ENST00000468211 SNCGO76070 127 aa12.51□□□□□ -0.41
PTCH1-210ENST00000468211 DSCR10P59022 87 aa12.5□□□□□ -0.41
PTCH1-210ENST00000468211 SPATA45Q537H7 98 aa12.5□□□□□ -0.41
PTCH1-210ENST00000468211 A0A1W2PNM2 257 aa12.47□□□□□ -0.41
PTCH1-210ENST00000468211 FABP2P12104 132 aa12.47□□□□□ -0.41
PTCH1-210ENST00000468211 KRTAP9-8Q9BYQ0 159 aa12.46□□□□□ -0.41
PTCH1-210ENST00000468211 CEND1Q8N111 149 aa12.45□□□□□ -0.42
PTCH1-210ENST00000468211 A0A1B0GX51 115 aa12.44□□□□□ -0.42
PTCH1-210ENST00000468211 PRO1854Q9UHT4 67 aa12.44□□□□□ -0.42
PTCH1-210ENST00000468211 KRTAP16-1A8MUX0 517 aa12.43□□□□□ -0.42
PTCH1-210ENST00000468211 FXYD2P54710 66 aa12.42□□□□□ -0.42
PTCH1-210ENST00000468211 TRIAP1O43715 76 aa12.41□□□□□ -0.42
PTCH1-210ENST00000468211 SIGMAR1Q99720 223 aa12.41□□□□□ -0.42
PTCH1-210ENST00000468211 VAMP8Q9BV40 100 aa12.41□□□□□ -0.42
PTCH1-210ENST00000468211 TRBV20-1A0A075B6N2 111 aa12.38□□□□□ -0.43
PTCH1-210ENST00000468211 GHRHP01286 108 aa12.37□□□□□ -0.43
PTCH1-210ENST00000468211 USH2AO75445 5202 aa12.37□□□□□ -0.43
PTCH1-210ENST00000468211 A0A1B0GV72 72 aa12.36□□□□□ -0.43
PTCH1-210ENST00000468211 TMEM238LA0A1B0GVL6 79 aa12.34□□□□□ -0.43
PTCH1-210ENST00000468211 A6NJY4 79 aa12.34□□□□□ -0.43
PTCH1-210ENST00000468211 IGKV4-1P06312 121 aa12.34□□□□□ -0.43
PTCH1-210ENST00000468211 LINC00313P59037 77 aa12.34□□□□□ -0.43
PTCH1-210ENST00000468211 NOTCH2NLQ7Z3S9 236 aa12.34□□□□□ -0.43
PTCH1-210ENST00000468211 ANKRD29Q8N6D5 301 aa12.32□□□□□ -0.44
PTCH1-210ENST00000468211 SSPOA2VEC9 5147 aa12.32□□□□□ -0.44
PTCH1-210ENST00000468211 TRBV7-4A0A0J9YYF1 115 aa12.31□□□□□ -0.44
PTCH1-210ENST00000468211 DEFB116Q30KQ4 102 aa12.3□□□□□ -0.44
PTCH1-210ENST00000468211 ORMDL1Q9P0S3 153 aa12.28□□□□□ -0.44
PTCH1-210ENST00000468211 K7ERJ3 54 aa12.27□□□□□ -0.45
PTCH1-210ENST00000468211 LINC00472Q9H8W2 130 aa12.27□□□□□ -0.45
PTCH1-210ENST00000468211 DNAL4O96015 105 aa12.25□□□□□ -0.45
PTCH1-210ENST00000468211 MT2AP02795 61 aa12.25□□□□□ -0.45
PTCH1-210ENST00000468211 MPLKIPQ8TAP9 179 aa12.25□□□□□ -0.45
PTCH1-210ENST00000468211 HRES1P13985 223 aa12.24□□□□□ -0.45
PTCH1-210ENST00000468211 FAM236DA0A1B0GTK5 79 aa12.23□□□□□ -0.45
PTCH1-210ENST00000468211 FAM236CP0DP71 79 aa12.23□□□□□ -0.45
PTCH1-210ENST00000468211 PSMB2P49721 201 aa12.23□□□□□ -0.45
PTCH1-210ENST00000468211 CCKP06307 115 aa12.21□□□□□ -0.45
PTCH1-210ENST00000468211 IGHV6-1A0A0B4J1U7 121 aa12.2□□□□□ -0.46
PTCH1-210ENST00000468211 TMEM256-PLSCR3K7ERE1 68 aa12.2□□□□□ -0.46
PTCH1-210ENST00000468211 HSD52Q0P140 79 aa12.2□□□□□ -0.46
PTCH1-210ENST00000468211 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-210ENST00000468211 H3BQ85 93 aa12.19□□□□□ -0.46
PTCH1-210ENST00000468211 TRACP01848 142 aa12.18□□□□□ -0.46
PTCH1-210ENST00000468211 MT1FP04733 61 aa12.16□□□□□ -0.46
PTCH1-210ENST00000468211 PYY3Q5JQD4 70 aa12.15□□□□□ -0.46
PTCH1-210ENST00000468211 UBE2V1Q13404 147 aa12.14□□□□□ -0.47
PTCH1-210ENST00000468211 RBM12B-AS1Q9P1G2 102 aa12.14□□□□□ -0.47
PTCH1-210ENST00000468211 COX6CP09669 75 aa12.13□□□□□ -0.47
PTCH1-210ENST00000468211 LCE2BO14633 110 aa12.11□□□□□ -0.47
PTCH1-210ENST00000468211 KRTAP9-7A8MTY7 169 aa12.1□□□□□ -0.47
PTCH1-210ENST00000468211 VPS25Q9BRG1 176 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms