RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 CLTCQ00610 1675 aaKnown RBP-2.88□□□□□ -2.87
SMC4-207ENST00000467263 RANBP2P49792 3224 aaKnown RBP-2.88□□□□□ -2.87
SMC4-207ENST00000467263 GAFA1Q96PS6 74 aa-2.88□□□□□ -2.87
SMC4-207ENST00000467263 RGPD1P0DJD0 1748 aa-2.88□□□□□ -2.87
SMC4-207ENST00000467263 DNAH8Q96JB1 4490 aa-2.89□□□□□ -2.87
SMC4-207ENST00000467263 FAUP35544 74 aaKnown RBP-2.89□□□□□ -2.87
SMC4-207ENST00000467263 S100A10P60903 97 aa-2.9□□□□□ -2.87
SMC4-207ENST00000467263 PRO3102Q9H379 93 aa-2.9□□□□□ -2.87
SMC4-207ENST00000467263 KRTAP20-1Q3LI63 56 aa-2.91□□□□□ -2.88
SMC4-207ENST00000467263 TIAM2Q8IVF5 1701 aa-2.91□□□□□ -2.88
SMC4-207ENST00000467263 IQCF6A8MYZ5 107 aa-2.92□□□□□ -2.88
SMC4-207ENST00000467263 C3orf79P0CE67 100 aa-2.92□□□□□ -2.88
SMC4-207ENST00000467263 DEFB110Q30KQ9 67 aa-2.92□□□□□ -2.88
SMC4-207ENST00000467263 SMG1Q96Q15 3661 aaKnown RBP-2.92□□□□□ -2.88
SMC4-207ENST00000467263 LINC00158P58513 81 aa-2.93□□□□□ -2.88
SMC4-207ENST00000467263 RGPD3A6NKT7 1758 aaPredicted RBP-2.94□□□□□ -2.88
SMC4-207ENST00000467263 RGPD4Q7Z3J3 1758 aa-2.94□□□□□ -2.88
SMC4-207ENST00000467263 PLXNC1O60486 1568 aa-2.94□□□□□ -2.88
SMC4-207ENST00000467263 A0A1B0GUT8 65 aa-2.94□□□□□ -2.88
SMC4-207ENST00000467263 PRLHP81277 87 aa-2.94□□□□□ -2.88
SMC4-207ENST00000467263 LRBAP50851 2863 aa-2.94□□□□□ -2.88
SMC4-207ENST00000467263 SUPT6HQ7KZ85 1726 aaKnown RBP-2.94□□□□□ -2.88
SMC4-207ENST00000467263 ITPR2Q14571 2701 aa-2.94□□□□□ -2.88
SMC4-207ENST00000467263 TLN2Q9Y4G6 2542 aa-2.94□□□□□ -2.88
SMC4-207ENST00000467263 FYCO1Q9BQS8 1478 aa-2.95□□□□□ -2.88
SMC4-207ENST00000467263 USP32Q8NFA0 1604 aa-2.95□□□□□ -2.88
SMC4-207ENST00000467263 MT1EP04732 61 aa-2.97□□□□□ -2.88
SMC4-207ENST00000467263 DNAH5Q8TE73 4624 aa-2.97□□□□□ -2.89
SMC4-207ENST00000467263 LINC00032P0C843 101 aa-2.98□□□□□ -2.89
SMC4-207ENST00000467263 MT1BP07438 61 aa-3□□□□□ -2.89
SMC4-207ENST00000467263 PLGLAQ15195 96 aa-3□□□□□ -2.89
SMC4-207ENST00000467263 EPRSP07814 1512 aaKnown RBP-3□□□□□ -2.89
SMC4-207ENST00000467263 ATP7BP35670 1465 aa-3.01□□□□□ -2.89
SMC4-207ENST00000467263 MT1MQ8N339 61 aa-3.01□□□□□ -2.89
SMC4-207ENST00000467263 MT1GP13640 62 aa-3.02□□□□□ -2.89
SMC4-207ENST00000467263 MT1LQ93083 61 aa-3.02□□□□□ -2.89
SMC4-207ENST00000467263 DNAH17Q9UFH2 4485 aa-3.02□□□□□ -2.89
SMC4-207ENST00000467263 NESP48681 1621 aa-3.02□□□□□ -2.89
SMC4-207ENST00000467263 POLR1AO95602 1720 aaPredicted RBP-3.02□□□□□ -2.89
SMC4-207ENST00000467263 TEX14Q8IWB6 1497 aa-3.03□□□□□ -2.89
SMC4-207ENST00000467263 HMGN2P05204 90 aaKnown RBP-3.03□□□□□ -2.89
SMC4-207ENST00000467263 WFDC9Q8NEX5 89 aa-3.03□□□□□ -2.89
SMC4-207ENST00000467263 FANCAO15360 1455 aa-3.03□□□□□ -2.9
SMC4-207ENST00000467263 TLN1Q9Y490 2541 aaKnown RBP-3.04□□□□□ -2.9
SMC4-207ENST00000467263 DPY30Q9C005 99 aa-3.04□□□□□ -2.9
SMC4-207ENST00000467263 WIZO95785 1651 aa-3.04□□□□□ -2.9
SMC4-207ENST00000467263 TRRAPQ9Y4A5 3859 aa-3.05□□□□□ -2.9
SMC4-207ENST00000467263 TRAV21A0A0B4J279 112 aa-3.05□□□□□ -2.9
SMC4-207ENST00000467263 CYB5AP00167 134 aa-3.05□□□□□ -2.9
SMC4-207ENST00000467263 MT2AP02795 61 aa-3.05□□□□□ -2.9
SMC4-207ENST00000467263 SPTAN1Q13813 2472 aaKnown RBP-3.05□□□□□ -2.9
SMC4-207ENST00000467263 NWD1Q149M9 1564 aa-3.06□□□□□ -2.9
SMC4-207ENST00000467263 DMXL2Q8TDJ6 3036 aa-3.06□□□□□ -2.9
SMC4-207ENST00000467263 BAZ1AQ9NRL2 1556 aaPredicted RBP-3.06□□□□□ -2.9
SMC4-207ENST00000467263 LTN1O94822 1766 aa-3.07□□□□□ -2.9
SMC4-207ENST00000467263 ATP10BO94823 1461 aa-3.08□□□□□ -2.9
SMC4-207ENST00000467263 C14orf144Q96I85 54 aa-3.08□□□□□ -2.9
SMC4-207ENST00000467263 BPTFQ12830 3046 aa-3.09□□□□□ -2.9
SMC4-207ENST00000467263 DOT1LQ8TEK3 1739 aa-3.09□□□□□ -2.9
SMC4-207ENST00000467263 SMR3BP02814 79 aaPredicted RBP-3.09□□□□□ -2.9
SMC4-207ENST00000467263 DEPDC5O75140 1603 aa-3.11□□□□□ -2.91
SMC4-207ENST00000467263 SMIM11AP58511 58 aa-3.11□□□□□ -2.91
SMC4-207ENST00000467263 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.11□□□□□ -2.91
SMC4-207ENST00000467263 PEA15Q15121 130 aa-3.12□□□□□ -2.91
SMC4-207ENST00000467263 SPENQ96T58 3664 aaKnown RBP-3.13□□□□□ -2.91
SMC4-207ENST00000467263 SPTBN5Q9NRC6 3674 aaKnown RBP-3.13□□□□□ -2.91
SMC4-207ENST00000467263 UBR1Q8IWV7 1749 aa-3.13□□□□□ -2.91
SMC4-207ENST00000467263 NEXMIFQ5QGS0 1516 aa-3.13□□□□□ -2.91
SMC4-207ENST00000467263 S100PP25815 95 aa-3.13□□□□□ -2.91
SMC4-207ENST00000467263 DNAH10Q8IVF4 4471 aa-3.14□□□□□ -2.91
SMC4-207ENST00000467263 DEFB130BP0DP73 79 aa-3.14□□□□□ -2.91
SMC4-207ENST00000467263 DEFB130AP0DP74 79 aa-3.14□□□□□ -2.91
SMC4-207ENST00000467263 CNTLNQ9NXG0 1405 aa-3.14□□□□□ -2.91
SMC4-207ENST00000467263 MAGI3Q5TCQ9 1506 aa-3.15□□□□□ -2.91
SMC4-207ENST00000467263 MYO3AQ8NEV4 1616 aa-3.15□□□□□ -2.91
SMC4-207ENST00000467263 CLPSL2Q6UWE3 100 aa-3.16□□□□□ -2.92
SMC4-207ENST00000467263 DEFB106AQ8N104 65 aa-3.16□□□□□ -2.92
SMC4-207ENST00000467263 IFI6P09912 130 aa-3.17□□□□□ -2.92
SMC4-207ENST00000467263 SARNPP82979 210 aaKnown RBP-3.17□□□□□ -2.92
SMC4-207ENST00000467263 TCEAL7Q9BRU2 100 aa-3.17□□□□□ -2.92
SMC4-207ENST00000467263 ATMQ13315 3056 aa-3.17□□□□□ -2.92
SMC4-207ENST00000467263 ATP6V1G2-DDX39BF2Z307 99 aa-3.18□□□□□ -2.92
SMC4-207ENST00000467263 LYNX1G3V0Z9 82 aa-3.18□□□□□ -2.92
SMC4-207ENST00000467263 PLIN4Q96Q06 1357 aa-3.18□□□□□ -2.92
SMC4-207ENST00000467263 CEP170BQ9Y4F5 1589 aaPredicted RBP-3.18□□□□□ -2.92
SMC4-207ENST00000467263 IAPPP10997 89 aa-3.19□□□□□ -2.92
SMC4-207ENST00000467263 NCMAPQ5T1S8 102 aa-3.2□□□□□ -2.92
SMC4-207ENST00000467263 C20orf78Q9BR46 151 aa-3.2□□□□□ -2.92
SMC4-207ENST00000467263 ACYP1P07311 99 aa-3.21□□□□□ -2.92
SMC4-207ENST00000467263 RBP2P50120 134 aa-3.21□□□□□ -2.92
SMC4-207ENST00000467263 ACBD7Q8N6N7 88 aa-3.21□□□□□ -2.92
SMC4-207ENST00000467263 LCE6AA0A183 80 aa-3.22□□□□□ -2.92
SMC4-207ENST00000467263 CDC42BPGQ6DT37 1551 aa-3.22□□□□□ -2.93
SMC4-207ENST00000467263 MYMXA0A1B0GTQ4 84 aa-3.23□□□□□ -2.93
SMC4-207ENST00000467263 ADGRG4Q8IZF6 3080 aa-3.23□□□□□ -2.93
SMC4-207ENST00000467263 ZNF831Q5JPB2 1677 aa-3.24□□□□□ -2.93
SMC4-207ENST00000467263 NDUFB1O75438 58 aa-3.24□□□□□ -2.93
SMC4-207ENST00000467263 GYPAP02724 150 aa-3.24□□□□□ -2.93
SMC4-207ENST00000467263 BOD1L1Q8NFC6 3051 aa-3.24□□□□□ -2.93
SMC4-207ENST00000467263 KRTAP19-6Q3LI70 58 aa-3.27□□□□□ -2.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms