RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 LOC730098B7Z3J9 87 aa0.52□□□□□ -2.33
CDC42BPA-211ENST00000466538 SFTA3P0C7M3 94 aa0.52□□□□□ -2.33
CDC42BPA-211ENST00000466538 NSD1Q96L73 2696 aaPredicted RBP0.51□□□□□ -2.33
CDC42BPA-211ENST00000466538 NBEAL2Q6ZNJ1 2754 aa0.51□□□□□ -2.33
CDC42BPA-211ENST00000466538 ETDCA0A1B0GVM5 59 aa0.51□□□□□ -2.33
CDC42BPA-211ENST00000466538 LINC01549A6NIU2 74 aa0.51□□□□□ -2.33
CDC42BPA-211ENST00000466538 ABCC6O95255 1503 aa0.51□□□□□ -2.33
CDC42BPA-211ENST00000466538 PCNTO95613 3336 aa0.51□□□□□ -2.33
CDC42BPA-211ENST00000466538 PREX2Q70Z35 1606 aa0.51□□□□□ -2.33
CDC42BPA-211ENST00000466538 KCNQ1DNQ9H478 68 aa0.51□□□□□ -2.33
CDC42BPA-211ENST00000466538 CNOT1A5YKK6 2376 aaKnown RBP0.5□□□□□ -2.33
CDC42BPA-211ENST00000466538 LY75O60449 1722 aa0.5□□□□□ -2.33
CDC42BPA-211ENST00000466538 C3P01024 1663 aa0.5□□□□□ -2.33
CDC42BPA-211ENST00000466538 ALS2Q96Q42 1657 aa0.5□□□□□ -2.33
CDC42BPA-211ENST00000466538 CELSR3Q9NYQ7 3312 aa0.5□□□□□ -2.33
CDC42BPA-211ENST00000466538 CHD9Q3L8U1 2897 aa0.5□□□□□ -2.33
CDC42BPA-211ENST00000466538 ANK2Q01484 3957 aa0.5□□□□□ -2.33
CDC42BPA-211ENST00000466538 GCN1Q92616 2671 aaKnown RBP0.5□□□□□ -2.33
CDC42BPA-211ENST00000466538 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
CDC42BPA-211ENST00000466538 CREBBPQ92793 2442 aa0.49□□□□□ -2.33
CDC42BPA-211ENST00000466538 FLNAP21333 2647 aaKnown RBP0.49□□□□□ -2.33
CDC42BPA-211ENST00000466538 CEP350Q5VT06 3117 aa0.49□□□□□ -2.33
CDC42BPA-211ENST00000466538 RYR2Q92736 4967 aa0.49□□□□□ -2.33
CDC42BPA-211ENST00000466538 GVINP1Q7Z2Y8 2422 aa0.49□□□□□ -2.33
CDC42BPA-211ENST00000466538 IGSF10Q6WRI0 2623 aa0.49□□□□□ -2.33
CDC42BPA-211ENST00000466538 K7EMI3 77 aa0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 FCER1GP30273 86 aa0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 SERF2P84101 59 aa0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 NCBP2-AS2Q69YL0 99 aa0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 SPTA1P02549 2419 aa0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 PLXNC1O60486 1568 aa0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 KMT2CQ8NEZ4 4911 aaKnown RBP0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 USP9YO00507 2555 aaPredicted RBP0.48□□□□□ -2.33
CDC42BPA-211ENST00000466538 MYO9AB2RTY4 2548 aa0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 A0A0C4DFX4 3053 aa0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 RYR1P21817 5038 aa0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 CRIP1P50238 77 aa0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 DEFB114Q30KQ6 69 aa0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 NMES1Q9C002 83 aa0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 MAST1Q9Y2H9 1570 aa0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
CDC42BPA-211ENST00000466538 FASNP49327 2511 aaKnown RBP0.46□□□□□ -2.34
CDC42BPA-211ENST00000466538 AKAP13Q12802 2813 aa0.46□□□□□ -2.34
CDC42BPA-211ENST00000466538 MROH2AA6NES4 1674 aa0.46□□□□□ -2.34
CDC42BPA-211ENST00000466538 ITSN2Q9NZM3 1697 aa0.46□□□□□ -2.34
CDC42BPA-211ENST00000466538 CSPG4Q6UVK1 2322 aa0.46□□□□□ -2.34
CDC42BPA-211ENST00000466538 ZFHX4Q86UP3 3567 aa0.45□□□□□ -2.34
CDC42BPA-211ENST00000466538 REV3LO60673 3130 aa0.45□□□□□ -2.34
CDC42BPA-211ENST00000466538 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
CDC42BPA-211ENST00000466538 H0YAA0 97 aa0.45□□□□□ -2.34
CDC42BPA-211ENST00000466538 KALRNO60229 2985 aa0.45□□□□□ -2.34
CDC42BPA-211ENST00000466538 ZANQ9Y493 2812 aa0.44□□□□□ -2.34
CDC42BPA-211ENST00000466538 UBR5O95071 2799 aaPredicted RBP0.44□□□□□ -2.34
CDC42BPA-211ENST00000466538 H0YGG7 62 aa0.44□□□□□ -2.34
CDC42BPA-211ENST00000466538 KRTAP20-1Q3LI63 56 aa0.44□□□□□ -2.34
CDC42BPA-211ENST00000466538 TENM2Q9NT68 2774 aa0.44□□□□□ -2.34
CDC42BPA-211ENST00000466538 STAB2Q8WWQ8 2551 aa0.44□□□□□ -2.34
CDC42BPA-211ENST00000466538 ABCA10Q8WWZ4 1543 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 ITPR1Q14643 2758 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 KMT2DO14686 5537 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 DEPDC5O75140 1603 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 WNK2Q9Y3S1 2297 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 LYNX1G3V0Z9 82 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 MINOS1Q5TGZ0 78 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 EPPK1P58107 5090 aaKnown RBP0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 SPG11Q96JI7 2443 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 FLNCQ14315 2725 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 TNXBP22105 4242 aa0.43□□□□□ -2.34
CDC42BPA-211ENST00000466538 ACACBO00763 2458 aa0.42□□□□□ -2.34
CDC42BPA-211ENST00000466538 ABCA13Q86UQ4 5058 aa0.42□□□□□ -2.34
CDC42BPA-211ENST00000466538 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
CDC42BPA-211ENST00000466538 M0R1W7 72 aa0.42□□□□□ -2.34
CDC42BPA-211ENST00000466538 M0R2T5 61 aa0.42□□□□□ -2.34
CDC42BPA-211ENST00000466538 IAPPP10997 89 aa0.42□□□□□ -2.34
CDC42BPA-211ENST00000466538 DEFB135Q30KP9 77 aa0.42□□□□□ -2.34
CDC42BPA-211ENST00000466538 SSPOA2VEC9 5147 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 EEA1Q15075 1411 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 PKD1L1Q8TDX9 2849 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 DEFB130BP0DP73 79 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 DEFB130AP0DP74 79 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 NBEAL1Q6ZS30 2694 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 LRP1Q07954 4544 aaKnown RBP0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 VCANP13611 3396 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 RYR3Q15413 4870 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 HIVEP1P15822 2718 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 CFAP46Q8IYW2 2715 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 PRXQ9BXM0 1461 aa0.41□□□□□ -2.34
CDC42BPA-211ENST00000466538 SYNE1Q8NF91 8797 aaKnown RBP0.4□□□□□ -2.34
CDC42BPA-211ENST00000466538 CROCC2H7BZ55 1655 aa0.4□□□□□ -2.34
CDC42BPA-211ENST00000466538 CEP295Q9C0D2 2601 aa0.4□□□□□ -2.34
CDC42BPA-211ENST00000466538 HYDINQ4G0P3 5121 aa0.4□□□□□ -2.34
CDC42BPA-211ENST00000466538 SZT2Q5T011 3432 aa0.4□□□□□ -2.35
CDC42BPA-211ENST00000466538 MAP1BP46821 2468 aaKnown RBP0.4□□□□□ -2.35
CDC42BPA-211ENST00000466538 MXRA5Q9NR99 2828 aa0.4□□□□□ -2.35
CDC42BPA-211ENST00000466538 OTOGQ6ZRI0 2925 aa0.4□□□□□ -2.35
CDC42BPA-211ENST00000466538 UTP20O75691 2785 aaKnown RBP0.4□□□□□ -2.35
CDC42BPA-211ENST00000466538 HERC1Q15751 4861 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms