RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
CD40-204ENST00000466205 MUC2Q02817 5179 aa5.73□□□□□ -1.49
CD40-204ENST00000466205 VAMP3Q15836 100 aa5.73□□□□□ -1.49
CD40-204ENST00000466205 FP248Q71RG6 208 aaPredicted RBP5.73□□□□□ -1.49
CD40-204ENST00000466205 SMIM29Q86T20 159 aa5.73□□□□□ -1.49
CD40-204ENST00000466205 SLC25A20O43772 301 aa5.72□□□□□ -1.49
CD40-204ENST00000466205 NHP2Q9NX24 153 aaKnown RBP5.72□□□□□ -1.49
CD40-204ENST00000466205 IGLV5-48A0A075B6I7 105 aa5.71□□□□□ -1.5
CD40-204ENST00000466205 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.5
CD40-204ENST00000466205 LINC00575Q6W349 94 aa5.71□□□□□ -1.5
CD40-204ENST00000466205 hADV29S1A0JD25 119 aa5.7□□□□□ -1.5
CD40-204ENST00000466205 CFC1BP0CG36 223 aa5.7□□□□□ -1.5
CD40-204ENST00000466205 CFC1P0CG37 223 aa5.7□□□□□ -1.5
CD40-204ENST00000466205 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
CD40-204ENST00000466205 Q6ZQY7 126 aa5.7□□□□□ -1.5
CD40-204ENST00000466205 RAB37Q96AX2 223 aa5.7□□□□□ -1.5
CD40-204ENST00000466205 K7ERJ3 54 aa5.69□□□□□ -1.5
CD40-204ENST00000466205 M0R143 59 aa5.69□□□□□ -1.5
CD40-204ENST00000466205 LIMD2Q9BT23 127 aa5.68□□□□□ -1.5
CD40-204ENST00000466205 A0A0B4J2C4 111 aa5.67□□□□□ -1.5
CD40-204ENST00000466205 BATFQ16520 125 aa5.67□□□□□ -1.5
CD40-204ENST00000466205 F8WEM9 126 aa5.66□□□□□ -1.5
CD40-204ENST00000466205 TAX1BP3O14907 124 aa5.66□□□□□ -1.5
CD40-204ENST00000466205 C9orf92A6NGG3 77 aa5.64□□□□□ -1.51
CD40-204ENST00000466205 FAM218AQ96MZ4 157 aa5.64□□□□□ -1.51
CD40-204ENST00000466205 CD164Q04900 197 aa5.63□□□□□ -1.51
CD40-204ENST00000466205 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.63□□□□□ -1.51
CD40-204ENST00000466205 PRO1854Q9UHT4 67 aa5.63□□□□□ -1.51
CD40-204ENST00000466205 H3BUT2 72 aa5.62□□□□□ -1.51
CD40-204ENST00000466205 COL5A1-AS1Q5SY13 56 aa5.62□□□□□ -1.51
CD40-204ENST00000466205 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
CD40-204ENST00000466205 XP32Q5T750 250 aa5.61□□□□□ -1.51
CD40-204ENST00000466205 IGFL1Q6UW32 110 aa5.61□□□□□ -1.51
CD40-204ENST00000466205 NAA38Q9BRA0 125 aaKnown RBP5.61□□□□□ -1.51
CD40-204ENST00000466205 C9orf118A6NHY6 69 aa5.6□□□□□ -1.51
CD40-204ENST00000466205 OCIAD2Q56VL3 154 aa5.6□□□□□ -1.51
CD40-204ENST00000466205 C1orf195Q5TG92 126 aa5.6□□□□□ -1.51
CD40-204ENST00000466205 FAT4Q6V0I7 4981 aa5.6□□□□□ -1.51
CD40-204ENST00000466205 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
CD40-204ENST00000466205 H0YGX0 51 aa5.59□□□□□ -1.51
CD40-204ENST00000466205 TRIAP1O43715 76 aa5.59□□□□□ -1.51
CD40-204ENST00000466205 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
CD40-204ENST00000466205 CLEC2BQ92478 149 aa5.59□□□□□ -1.51
CD40-204ENST00000466205 PSMB2P49721 201 aa5.58□□□□□ -1.52
CD40-204ENST00000466205 KRTAP4-1Q9BYQ7 146 aa5.58□□□□□ -1.52
CD40-204ENST00000466205 SNCGO76070 127 aa5.57□□□□□ -1.52
CD40-204ENST00000466205 TCL1BO95988 128 aa5.57□□□□□ -1.52
CD40-204ENST00000466205 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
CD40-204ENST00000466205 Q5XG85 94 aa5.57□□□□□ -1.52
CD40-204ENST00000466205 Q6JHZ5 121 aa5.57□□□□□ -1.52
CD40-204ENST00000466205 IGLV8-61A0A075B6I0 122 aa5.56□□□□□ -1.52
CD40-204ENST00000466205 TRBV7-7A0A0K0K1E9 115 aa5.56□□□□□ -1.52
CD40-204ENST00000466205 A0A1B0GV72 72 aa5.56□□□□□ -1.52
CD40-204ENST00000466205 FABP2P12104 132 aa5.56□□□□□ -1.52
CD40-204ENST00000466205 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
CD40-204ENST00000466205 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
CD40-204ENST00000466205 A0A1B0GV90 55 aa5.55□□□□□ -1.52
CD40-204ENST00000466205 A0A1W2PPM0 123 aa5.55□□□□□ -1.52
CD40-204ENST00000466205 NDUFV3P56181 108 aaKnown RBP5.55□□□□□ -1.52
CD40-204ENST00000466205 PCOTHQ58A44 107 aa5.53□□□□□ -1.52
CD40-204ENST00000466205 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
CD40-204ENST00000466205 A0A1B0GX51 115 aa5.52□□□□□ -1.53
CD40-204ENST00000466205 H3BMG7 143 aa5.52□□□□□ -1.53
CD40-204ENST00000466205 H3BS24 57 aa5.52□□□□□ -1.53
CD40-204ENST00000466205 DNAL4O96015 105 aa5.52□□□□□ -1.53
CD40-204ENST00000466205 COX6CP09669 75 aa5.5□□□□□ -1.53
CD40-204ENST00000466205 ORMDL1Q9P0S3 153 aa5.5□□□□□ -1.53
CD40-204ENST00000466205 A0A087WSZ3 146 aa5.49□□□□□ -1.53
CD40-204ENST00000466205 K7EP34 96 aa5.49□□□□□ -1.53
CD40-204ENST00000466205 LST1O00453 97 aa5.49□□□□□ -1.53
CD40-204ENST00000466205 SCGB1C2P0DMR2 95 aa5.49□□□□□ -1.53
CD40-204ENST00000466205 SPCS1Q9Y6A9 102 aa5.49□□□□□ -1.53
CD40-204ENST00000466205 PRO0461Q9UI25 63 aa5.48□□□□□ -1.53
CD40-204ENST00000466205 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
CD40-204ENST00000466205 TEN1Q86WV5 123 aa5.47□□□□□ -1.53
CD40-204ENST00000466205 OBSCN-AS1Q96MR7 158 aa5.47□□□□□ -1.53
CD40-204ENST00000466205 TRBV20-1A0A075B6N2 111 aa5.46□□□□□ -1.54
CD40-204ENST00000466205 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
CD40-204ENST00000466205 TRACP01848 142 aa5.46□□□□□ -1.54
CD40-204ENST00000466205 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
CD40-204ENST00000466205 Q6Q795 121 aa5.46□□□□□ -1.54
CD40-204ENST00000466205 ANKRD29Q8N6D5 301 aa5.46□□□□□ -1.54
CD40-204ENST00000466205 TMEM256-PLSCR3K7ERE1 68 aa5.45□□□□□ -1.54
CD40-204ENST00000466205 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
CD40-204ENST00000466205 SS18L2Q9UHA2 77 aa5.45□□□□□ -1.54
CD40-204ENST00000466205 ATXN8Q156A1 80 aa5.44□□□□□ -1.54
CD40-204ENST00000466205 LYRM7Q5U5X0 104 aa5.44□□□□□ -1.54
CD40-204ENST00000466205 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
CD40-204ENST00000466205 UBE2V1Q13404 147 aa5.43□□□□□ -1.54
CD40-204ENST00000466205 MTURNQ8N3F0 131 aa5.43□□□□□ -1.54
CD40-204ENST00000466205 Q96NJ1 140 aa5.43□□□□□ -1.54
CD40-204ENST00000466205 VPS25Q9BRG1 176 aa5.43□□□□□ -1.54
CD40-204ENST00000466205 DEFB116Q30KQ4 102 aa5.42□□□□□ -1.54
CD40-204ENST00000466205 SIGMAR1Q99720 223 aa5.42□□□□□ -1.54
CD40-204ENST00000466205 C9JAW5 83 aa5.41□□□□□ -1.54
CD40-204ENST00000466205 H3BQ85 93 aa5.41□□□□□ -1.54
CD40-204ENST00000466205 CCKP06307 115 aa5.41□□□□□ -1.54
CD40-204ENST00000466205 DSCR10P59022 87 aa5.41□□□□□ -1.54
CD40-204ENST00000466205 GTF2H5Q6ZYL4 71 aa5.41□□□□□ -1.54
CD40-204ENST00000466205 TRBV7-4A0A0J9YYF1 115 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms