RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 RGS21Q2M5E4 152 aa4.48□□□□□ -1.69
APP-213ENST00000464867 BAGE3Q86Y29 109 aa4.48□□□□□ -1.69
APP-213ENST00000464867 TMEM223A0PJW6 202 aa4.47□□□□□ -1.69
APP-213ENST00000464867 LINC01546A6NGU7 62 aa4.47□□□□□ -1.69
APP-213ENST00000464867 HBDP02042 147 aa4.46□□□□□ -1.7
APP-213ENST00000464867 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
APP-213ENST00000464867 SLC7A5P1Q8MH63 180 aa4.46□□□□□ -1.7
APP-213ENST00000464867 HRES1P13985 223 aa4.45□□□□□ -1.7
APP-213ENST00000464867 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
APP-213ENST00000464867 PEA15Q15121 130 aa4.45□□□□□ -1.7
APP-213ENST00000464867 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
APP-213ENST00000464867 S100A1P23297 94 aa4.44□□□□□ -1.7
APP-213ENST00000464867 COX7BP24311 80 aa4.44□□□□□ -1.7
APP-213ENST00000464867 IFITM2Q01629 132 aa4.44□□□□□ -1.7
APP-213ENST00000464867 RHEBQ15382 184 aa4.44□□□□□ -1.7
APP-213ENST00000464867 OR13C6PQ8NH95 151 aa4.43□□□□□ -1.7
APP-213ENST00000464867 C9JQL5 133 aa4.42□□□□□ -1.7
APP-213ENST00000464867 F8WEM9 126 aa4.42□□□□□ -1.7
APP-213ENST00000464867 MT-ND4LP03901 98 aa4.42□□□□□ -1.7
APP-213ENST00000464867 SPRR2EP22531 72 aa4.42□□□□□ -1.7
APP-213ENST00000464867 SPRR2BP35325 72 aa4.42□□□□□ -1.7
APP-213ENST00000464867 SPRR2AP35326 72 aa4.42□□□□□ -1.7
APP-213ENST00000464867 ELOF1P60002 83 aaKnown RBP4.42□□□□□ -1.7
APP-213ENST00000464867 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
APP-213ENST00000464867 LST1O00453 97 aa4.41□□□□□ -1.7
APP-213ENST00000464867 TRBV7-7A0A0K0K1E9 115 aa4.4□□□□□ -1.71
APP-213ENST00000464867 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
APP-213ENST00000464867 IGLV5-48A0A075B6I7 105 aa4.39□□□□□ -1.71
APP-213ENST00000464867 NDUFA5Q16718 116 aa4.39□□□□□ -1.71
APP-213ENST00000464867 KRTAP16-1A8MUX0 517 aa4.38□□□□□ -1.71
APP-213ENST00000464867 NPC2P61916 151 aa4.38□□□□□ -1.71
APP-213ENST00000464867 NOTCH2NLQ7Z3S9 236 aa4.38□□□□□ -1.71
APP-213ENST00000464867 ZNF815PA8K554 130 aa4.37□□□□□ -1.71
APP-213ENST00000464867 NMUP48645 174 aa4.37□□□□□ -1.71
APP-213ENST00000464867 Q6JHZ5 121 aa4.37□□□□□ -1.71
APP-213ENST00000464867 TCTE3Q8IZS6 198 aa4.37□□□□□ -1.71
APP-213ENST00000464867 A0A096LNJ9 63 aa4.36□□□□□ -1.71
APP-213ENST00000464867 CLEC2BQ92478 149 aa4.36□□□□□ -1.71
APP-213ENST00000464867 LINC00614P0C842 121 aa4.35□□□□□ -1.71
APP-213ENST00000464867 PMCHL1Q16048 86 aa4.35□□□□□ -1.71
APP-213ENST00000464867 SOSTDC1Q6X4U4 206 aa4.35□□□□□ -1.71
APP-213ENST00000464867 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
APP-213ENST00000464867 SPANXDQ9BXN6 97 aa4.35□□□□□ -1.71
APP-213ENST00000464867 TRAV12-1A0A0B4J245 112 aa4.34□□□□□ -1.71
APP-213ENST00000464867 TRBV7-6A0A0J9YX20 115 aa4.34□□□□□ -1.71
APP-213ENST00000464867 RPS10P5Q9NQ39 176 aa4.34□□□□□ -1.71
APP-213ENST00000464867 SPANXCQ9NY87 97 aa4.34□□□□□ -1.71
APP-213ENST00000464867 LEPROTO15243 131 aa4.33□□□□□ -1.72
APP-213ENST00000464867 DSCR10P59022 87 aa4.33□□□□□ -1.72
APP-213ENST00000464867 NHP2Q9NX24 153 aaKnown RBP4.33□□□□□ -1.72
APP-213ENST00000464867 A0A1B0GWB2 263 aa4.32□□□□□ -1.72
APP-213ENST00000464867 FABP9Q0Z7S8 132 aa4.32□□□□□ -1.72
APP-213ENST00000464867 Q5VV11 94 aa4.32□□□□□ -1.72
APP-213ENST00000464867 SS18L2Q9UHA2 77 aa4.32□□□□□ -1.72
APP-213ENST00000464867 TRAV13-2A0A0B4J235 113 aa4.31□□□□□ -1.72
APP-213ENST00000464867 J3QQQ9 107 aa4.31□□□□□ -1.72
APP-213ENST00000464867 TSPEAR-AS2P59090 65 aa4.31□□□□□ -1.72
APP-213ENST00000464867 ADAMTSL4-AS1Q5T5F5 129 aa4.31□□□□□ -1.72
APP-213ENST00000464867 Q6ZVQ6 151 aa4.31□□□□□ -1.72
APP-213ENST00000464867 SEC11CQ9BY50 192 aa4.31□□□□□ -1.72
APP-213ENST00000464867 LINC00313P59037 77 aa4.3□□□□□ -1.72
APP-213ENST00000464867 LINC00518Q8N0U6 118 aa4.3□□□□□ -1.72
APP-213ENST00000464867 FAM218AQ96MZ4 157 aa4.3□□□□□ -1.72
APP-213ENST00000464867 SPRR2DP22532 72 aa4.29□□□□□ -1.72
APP-213ENST00000464867 HERVK_113P61574 105 aa4.29□□□□□ -1.72
APP-213ENST00000464867 COX19Q49B96 90 aa4.29□□□□□ -1.72
APP-213ENST00000464867 IFI27L1Q96BM0 104 aa4.29□□□□□ -1.72
APP-213ENST00000464867 LITAFQ99732 161 aa4.28□□□□□ -1.72
APP-213ENST00000464867 LOC105371267A0A1B0GV96 52 aa4.27□□□□□ -1.73
APP-213ENST00000464867 S100PP25815 95 aa4.27□□□□□ -1.73
APP-213ENST00000464867 OCIAD2Q56VL3 154 aa4.27□□□□□ -1.73
APP-213ENST00000464867 LINC00308Q8TCZ7 52 aa4.27□□□□□ -1.73
APP-213ENST00000464867 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
APP-213ENST00000464867 A0A0J9YXY3 114 aa4.26□□□□□ -1.73
APP-213ENST00000464867 A0A1W2PNM2 257 aa4.26□□□□□ -1.73
APP-213ENST00000464867 MT1BP07438 61 aa4.26□□□□□ -1.73
APP-213ENST00000464867 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
APP-213ENST00000464867 C18orf32Q8TCD1 76 aa4.26□□□□□ -1.73
APP-213ENST00000464867 SPINK7P58062 85 aa4.25□□□□□ -1.73
APP-213ENST00000464867 IMUPQ9GZP8 106 aa4.25□□□□□ -1.73
APP-213ENST00000464867 COLCA2A8K830 154 aa4.24□□□□□ -1.73
APP-213ENST00000464867 H0Y8G0 127 aa4.24□□□□□ -1.73
APP-213ENST00000464867 PLNP26678 52 aa4.24□□□□□ -1.73
APP-213ENST00000464867 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
APP-213ENST00000464867 SIGMAR1Q99720 223 aa4.24□□□□□ -1.73
APP-213ENST00000464867 SNAPINO95295 136 aa4.23□□□□□ -1.73
APP-213ENST00000464867 WFDC13Q8IUB5 93 aa4.22□□□□□ -1.73
APP-213ENST00000464867 A6NDN8 102 aa4.21□□□□□ -1.74
APP-213ENST00000464867 HSBP1L1C9JCN9 74 aa4.21□□□□□ -1.74
APP-213ENST00000464867 FAM236AA0A1B0GUQ0 79 aa4.2□□□□□ -1.74
APP-213ENST00000464867 FAM236BA0A1B0GV22 79 aa4.2□□□□□ -1.74
APP-213ENST00000464867 SERF1AO75920 110 aa4.19□□□□□ -1.74
APP-213ENST00000464867 VAMP3Q15836 100 aa4.19□□□□□ -1.74
APP-213ENST00000464867 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
APP-213ENST00000464867 SNHG12Q9BXW3 62 aa4.19□□□□□ -1.74
APP-213ENST00000464867 TRAPPC1Q9Y5R8 145 aa4.19□□□□□ -1.74
APP-213ENST00000464867 TIMM17BO60830 172 aa4.18□□□□□ -1.74
APP-213ENST00000464867 DPM2O94777 84 aa4.18□□□□□ -1.74
APP-213ENST00000464867 Q6ZQY7 126 aa4.18□□□□□ -1.74
APP-213ENST00000464867 TEN1Q86WV5 123 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms