RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FUSP35637 526 aaKnown RBP eCLIP6.26□□□□□ -1.41
PTPRD-207ENST00000463477 Q9BRP9 147 aa6.26□□□□□ -1.41
PTPRD-207ENST00000463477 HSPG2P98160 4391 aa6.26□□□□□ -1.41
PTPRD-207ENST00000463477 IGLV5-52A0A0A0MRZ9 124 aa6.26□□□□□ -1.41
PTPRD-207ENST00000463477 APOBP04114 4563 aaKnown RBP6.26□□□□□ -1.41
PTPRD-207ENST00000463477 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
PTPRD-207ENST00000463477 J3QL48 77 aa6.25□□□□□ -1.41
PTPRD-207ENST00000463477 HAMPP81172 84 aa6.25□□□□□ -1.41
PTPRD-207ENST00000463477 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
PTPRD-207ENST00000463477 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
PTPRD-207ENST00000463477 REG3GQ6UW15 175 aa6.24□□□□□ -1.41
PTPRD-207ENST00000463477 KRTAP10-1P60331 282 aa6.23□□□□□ -1.41
PTPRD-207ENST00000463477 FAM19A5Q7Z5A7 132 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-207ENST00000463477 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-207ENST00000463477 TRAV7A0A075B6U4 112 aa6.22□□□□□ -1.41
PTPRD-207ENST00000463477 A0A096LNI7 61 aa6.22□□□□□ -1.41
PTPRD-207ENST00000463477 DNAH8Q96JB1 4490 aa6.21□□□□□ -1.41
PTPRD-207ENST00000463477 DEFB105AQ8NG35 78 aa6.2□□□□□ -1.42
PTPRD-207ENST00000463477 UBE2BP63146 152 aa6.2□□□□□ -1.42
PTPRD-207ENST00000463477 NREPQ16612 68 aa6.2□□□□□ -1.42
PTPRD-207ENST00000463477 Q8NBF4 154 aa6.2□□□□□ -1.42
PTPRD-207ENST00000463477 SPRR4Q96PI1 79 aa6.2□□□□□ -1.42
PTPRD-207ENST00000463477 H0Y9J4 135 aa6.19□□□□□ -1.42
PTPRD-207ENST00000463477 TMEM258P61165 79 aa6.19□□□□□ -1.42
PTPRD-207ENST00000463477 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
PTPRD-207ENST00000463477 ERC2-IT1O76042 136 aa6.18□□□□□ -1.42
PTPRD-207ENST00000463477 Q6ZSA8 131 aa6.18□□□□□ -1.42
PTPRD-207ENST00000463477 Q8N1X5 172 aa6.18□□□□□ -1.42
PTPRD-207ENST00000463477 C9orf163Q8N9P6 203 aa6.18□□□□□ -1.42
PTPRD-207ENST00000463477 ST20-AS1Q8NBB2 130 aa6.18□□□□□ -1.42
PTPRD-207ENST00000463477 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
PTPRD-207ENST00000463477 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
PTPRD-207ENST00000463477 IGLV8-61A0A075B6I0 122 aa6.17□□□□□ -1.42
PTPRD-207ENST00000463477 A0A1W2PNM2 257 aa6.17□□□□□ -1.42
PTPRD-207ENST00000463477 A0A1W2PNN7 141 aa6.17□□□□□ -1.42
PTPRD-207ENST00000463477 SMIM29Q86T20 159 aa6.17□□□□□ -1.42
PTPRD-207ENST00000463477 IGKV4-1P06312 121 aa6.17□□□□□ -1.42
PTPRD-207ENST00000463477 FAT1Q14517 4588 aa6.16□□□□□ -1.42
PTPRD-207ENST00000463477 BPY2O14599 106 aa6.16□□□□□ -1.42
PTPRD-207ENST00000463477 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
PTPRD-207ENST00000463477 IGKV2-24A0A0C4DH68 120 aa6.15□□□□□ -1.42
PTPRD-207ENST00000463477 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
PTPRD-207ENST00000463477 KRTAP4-5Q9BYR2 181 aa6.15□□□□□ -1.42
PTPRD-207ENST00000463477 CYSTM1Q9H1C7 97 aa6.15□□□□□ -1.42
PTPRD-207ENST00000463477 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
PTPRD-207ENST00000463477 F8WEM9 126 aa6.14□□□□□ -1.43
PTPRD-207ENST00000463477 SPRR1BP22528 89 aa6.14□□□□□ -1.43
PTPRD-207ENST00000463477 KLKP1Q107X0 134 aa6.14□□□□□ -1.43
PTPRD-207ENST00000463477 SCXQ7RTU7 201 aa6.14□□□□□ -1.43
PTPRD-207ENST00000463477 EPM2AB3EWF7 344 aa6.14□□□□□ -1.43
PTPRD-207ENST00000463477 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-207ENST00000463477 ABCA13Q86UQ4 5058 aa6.11□□□□□ -1.43
PTPRD-207ENST00000463477 PRLHP81277 87 aa6.11□□□□□ -1.43
PTPRD-207ENST00000463477 C4orf48Q5BLP8 95 aa6.11□□□□□ -1.43
PTPRD-207ENST00000463477 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
PTPRD-207ENST00000463477 J3KT08 172 aa6.1□□□□□ -1.43
PTPRD-207ENST00000463477 PHF5AQ7RTV0 110 aaKnown RBP6.1□□□□□ -1.43
PTPRD-207ENST00000463477 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
PTPRD-207ENST00000463477 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
PTPRD-207ENST00000463477 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
PTPRD-207ENST00000463477 CIRBP-AS1Q8TBR5 109 aa6.1□□□□□ -1.43
PTPRD-207ENST00000463477 NDUFC1O43677 76 aa6.09□□□□□ -1.43
PTPRD-207ENST00000463477 Q5VSD8 79 aa6.09□□□□□ -1.43
PTPRD-207ENST00000463477 HIGD2AQ9BW72 106 aa6.09□□□□□ -1.43
PTPRD-207ENST00000463477 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
PTPRD-207ENST00000463477 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
PTPRD-207ENST00000463477 KRTAP11-1Q8IUC1 163 aa6.08□□□□□ -1.44
PTPRD-207ENST00000463477 Q8N9L7 120 aa6.08□□□□□ -1.44
PTPRD-207ENST00000463477 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
PTPRD-207ENST00000463477 SRRM2Q9UQ35 2752 aaKnown RBP6.07□□□□□ -1.44
PTPRD-207ENST00000463477 H7BZZ5 65 aa6.07□□□□□ -1.44
PTPRD-207ENST00000463477 DSCR10P59022 87 aa6.07□□□□□ -1.44
PTPRD-207ENST00000463477 SPACA4Q8TDM5 124 aa6.07□□□□□ -1.44
PTPRD-207ENST00000463477 DPH3Q96FX2 82 aa6.07□□□□□ -1.44
PTPRD-207ENST00000463477 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-207ENST00000463477 PANO1I0J062 215 aa6.07□□□□□ -1.44
PTPRD-207ENST00000463477 UBE2AP49459 152 aa6.07□□□□□ -1.44
PTPRD-207ENST00000463477 PLA2G1BP04054 148 aaKnown RBP6.04□□□□□ -1.44
PTPRD-207ENST00000463477 FAM236DA0A1B0GTK5 79 aa6.04□□□□□ -1.44
PTPRD-207ENST00000463477 FAM236CP0DP71 79 aa6.04□□□□□ -1.44
PTPRD-207ENST00000463477 ATP5EP56381 51 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-207ENST00000463477 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
PTPRD-207ENST00000463477 RPL37AP61513 92 aaKnown RBP6.03□□□□□ -1.44
PTPRD-207ENST00000463477 PLAC8Q9NZF1 115 aa6.03□□□□□ -1.44
PTPRD-207ENST00000463477 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
PTPRD-207ENST00000463477 K7EQZ3 153 aa6.01□□□□□ -1.45
PTPRD-207ENST00000463477 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-207ENST00000463477 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-207ENST00000463477 A0A087WSZ3 146 aa6.01□□□□□ -1.45
PTPRD-207ENST00000463477 SNURFQ9Y675 71 aa6.01□□□□□ -1.45
PTPRD-207ENST00000463477 HCG22E2RYF7 251 aa6□□□□□ -1.45
PTPRD-207ENST00000463477 LINC00483Q53H64 154 aa6□□□□□ -1.45
PTPRD-207ENST00000463477 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
PTPRD-207ENST00000463477 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
PTPRD-207ENST00000463477 A0A0G2JQZ4 141 aa5.98□□□□□ -1.45
PTPRD-207ENST00000463477 ZNF706Q9Y5V0 76 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-207ENST00000463477 LINC00472Q9H8W2 130 aa5.98□□□□□ -1.45
PTPRD-207ENST00000463477 MYCBP2O75592 4640 aa5.97□□□□□ -1.45
PTPRD-207ENST00000463477 OXTP01178 125 aa5.97□□□□□ -1.45
PTPRD-207ENST00000463477 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms