RNA–Protein interactions for RNA: ENST00000463456.5

LRPPRC-206, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 3,549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-206ENST00000463456 RELNP78509 3460 aa2.89□□□□□ -1.95
LRPPRC-206ENST00000463456 ANKHD1Q8IWZ3 2542 aaKnown RBP2.88□□□□□ -1.95
LRPPRC-206ENST00000463456 ANK3Q12955 4377 aaKnown RBP2.88□□□□□ -1.95
LRPPRC-206ENST00000463456 CCL19Q99731 98 aa2.88□□□□□ -1.95
LRPPRC-206ENST00000463456 APC2O95996 2303 aa2.88□□□□□ -1.95
LRPPRC-206ENST00000463456 J3QKU1 62 aa2.88□□□□□ -1.95
LRPPRC-206ENST00000463456 CASC10Q5T4H9 136 aa2.88□□□□□ -1.95
LRPPRC-206ENST00000463456 A0A087WTM6 91 aa2.87□□□□□ -1.95
LRPPRC-206ENST00000463456 ASH1LQ9NR48 2969 aaKnown RBP2.87□□□□□ -1.95
LRPPRC-206ENST00000463456 A0A0G2JQZ4 141 aa2.87□□□□□ -1.95
LRPPRC-206ENST00000463456 A0A1W2PNN7 141 aa2.87□□□□□ -1.95
LRPPRC-206ENST00000463456 DEFB124Q8NES8 71 aa2.87□□□□□ -1.95
LRPPRC-206ENST00000463456 PTPRZ1P23471 2315 aaPredicted RBP2.87□□□□□ -1.95
LRPPRC-206ENST00000463456 EYSQ5T1H1 3165 aa2.87□□□□□ -1.95
LRPPRC-206ENST00000463456 IGKV2-30P06310 120 aa2.86□□□□□ -1.95
LRPPRC-206ENST00000463456 COL12A1Q99715 3063 aa2.86□□□□□ -1.95
LRPPRC-206ENST00000463456 KRTAP11-1Q8IUC1 163 aa2.86□□□□□ -1.95
LRPPRC-206ENST00000463456 ZNF462Q96JM2 2506 aa2.86□□□□□ -1.95
LRPPRC-206ENST00000463456 OTOGLQ3ZCN5 2332 aa2.86□□□□□ -1.95
LRPPRC-206ENST00000463456 RP1L1Q8IWN7 2480 aaPredicted RBP2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 PANO1I0J062 215 aa2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 KRTAP21-3Q3LHN1 58 aa2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 H0YAA0 97 aa2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 SPART-AS1P0CW21 52 aa2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 CHD8Q9HCK8 2581 aa2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 GVINP1Q7Z2Y8 2422 aa2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 NOTCH3Q9UM47 2321 aa2.85□□□□□ -1.95
LRPPRC-206ENST00000463456 SVEP1Q4LDE5 3571 aa2.84□□□□□ -1.95
LRPPRC-206ENST00000463456 KRTAP23-1A1A580 65 aa2.84□□□□□ -1.95
LRPPRC-206ENST00000463456 TPRP12270 2363 aaKnown RBP2.83□□□□□ -1.96
LRPPRC-206ENST00000463456 IGKV2D-30A0A075B6S6 120 aa2.83□□□□□ -1.96
LRPPRC-206ENST00000463456 CHTF8P0CG12 524 aa2.83□□□□□ -1.96
LRPPRC-206ENST00000463456 DEFB113Q30KQ7 82 aa2.83□□□□□ -1.96
LRPPRC-206ENST00000463456 ACACBO00763 2458 aa2.83□□□□□ -1.96
LRPPRC-206ENST00000463456 Q6ZSA8 131 aa2.83□□□□□ -1.96
LRPPRC-206ENST00000463456 RIF1Q5UIP0 2472 aaKnown RBP2.83□□□□□ -1.96
LRPPRC-206ENST00000463456 NCOR2Q9Y618 2525 aa2.83□□□□□ -1.96
LRPPRC-206ENST00000463456 ATRXP46100 2492 aa2.82□□□□□ -1.96
LRPPRC-206ENST00000463456 ITPR1Q14643 2758 aa2.82□□□□□ -1.96
LRPPRC-206ENST00000463456 AKAP6Q13023 2319 aa2.81□□□□□ -1.96
LRPPRC-206ENST00000463456 K7EIL1 84 aa2.81□□□□□ -1.96
LRPPRC-206ENST00000463456 LORP23490 312 aaPredicted RBP2.81□□□□□ -1.96
LRPPRC-206ENST00000463456 SPTBN4Q9H254 2564 aa2.81□□□□□ -1.96
LRPPRC-206ENST00000463456 CRYBG3Q68DQ2 2970 aa2.81□□□□□ -1.96
LRPPRC-206ENST00000463456 ZFHX2Q9C0A1 2572 aaPredicted RBP2.8□□□□□ -1.96
LRPPRC-206ENST00000463456 PRLHP81277 87 aa2.8□□□□□ -1.96
LRPPRC-206ENST00000463456 SETXQ7Z333 2677 aaKnown RBP2.8□□□□□ -1.96
LRPPRC-206ENST00000463456 TRRAPQ9Y4A5 3859 aa2.79□□□□□ -1.96
LRPPRC-206ENST00000463456 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
LRPPRC-206ENST00000463456 K7ERS5 55 aa2.78□□□□□ -1.96
LRPPRC-206ENST00000463456 EPG5Q9HCE0 2579 aa2.78□□□□□ -1.96
LRPPRC-206ENST00000463456 USP24Q9UPU5 2620 aa2.78□□□□□ -1.96
LRPPRC-206ENST00000463456 PSORS1C2Q9UIG4 136 aa2.78□□□□□ -1.96
LRPPRC-206ENST00000463456 H1FX-AS1Q4G0G2 97 aa2.77□□□□□ -1.97
LRPPRC-206ENST00000463456 COX6B2Q6YFQ2 88 aa2.77□□□□□ -1.97
LRPPRC-206ENST00000463456 MAST4O15021 2626 aa2.77□□□□□ -1.97
LRPPRC-206ENST00000463456 ACACAQ13085 2346 aa2.77□□□□□ -1.97
LRPPRC-206ENST00000463456 APCP25054 2843 aa2.77□□□□□ -1.97
LRPPRC-206ENST00000463456 A0A1B0GU33 70 aa2.76□□□□□ -1.97
LRPPRC-206ENST00000463456 DEFB135Q30KP9 77 aa2.75□□□□□ -1.97
LRPPRC-206ENST00000463456 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
LRPPRC-206ENST00000463456 ANK2Q01484 3957 aa2.75□□□□□ -1.97
LRPPRC-206ENST00000463456 A0A096LNI7 61 aa2.75□□□□□ -1.97
LRPPRC-206ENST00000463456 ZNF292O60281 2723 aa2.75□□□□□ -1.97
LRPPRC-206ENST00000463456 TPRXLQ17RH7 258 aa2.75□□□□□ -1.97
LRPPRC-206ENST00000463456 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
LRPPRC-206ENST00000463456 VPS13DQ5THJ4 4388 aa2.74□□□□□ -1.97
LRPPRC-206ENST00000463456 SPTAN1Q13813 2472 aaKnown RBP2.74□□□□□ -1.97
LRPPRC-206ENST00000463456 NBASA2RRP1 2371 aa2.74□□□□□ -1.97
LRPPRC-206ENST00000463456 FRAS1Q86XX4 4008 aa2.74□□□□□ -1.97
LRPPRC-206ENST00000463456 C2CD3Q4AC94 2353 aa2.73□□□□□ -1.97
LRPPRC-206ENST00000463456 NBDYA0A0U1RRE5 68 aa2.73□□□□□ -1.97
LRPPRC-206ENST00000463456 ANKRD11Q6UB99 2663 aaPredicted RBP2.73□□□□□ -1.97
LRPPRC-206ENST00000463456 DEFB4AO15263 64 aa2.72□□□□□ -1.97
LRPPRC-206ENST00000463456 FASNP49327 2511 aaKnown RBP2.72□□□□□ -1.97
LRPPRC-206ENST00000463456 CSMD2Q7Z408 3487 aa2.72□□□□□ -1.97
LRPPRC-206ENST00000463456 MUC3AQ02505 3323 aa2.72□□□□□ -1.97
LRPPRC-206ENST00000463456 SSBP3-AS1Q7Z2R9 100 aa2.71□□□□□ -1.98
LRPPRC-206ENST00000463456 UTP20O75691 2785 aaKnown RBP2.71□□□□□ -1.98
LRPPRC-206ENST00000463456 MXRA5Q9NR99 2828 aa2.71□□□□□ -1.98
LRPPRC-206ENST00000463456 HTN3P15516 51 aa2.71□□□□□ -1.98
LRPPRC-206ENST00000463456 C14orf177Q52M58 125 aa2.7□□□□□ -1.98
LRPPRC-206ENST00000463456 ANKRD17O75179 2603 aaKnown RBP2.7□□□□□ -1.98
LRPPRC-206ENST00000463456 NF1P21359 2839 aa2.69□□□□□ -1.98
LRPPRC-206ENST00000463456 LYSTQ99698 3801 aa2.69□□□□□ -1.98
LRPPRC-206ENST00000463456 SPTA1P02549 2419 aa2.69□□□□□ -1.98
LRPPRC-206ENST00000463456 KRTAP24-1Q3LI83 254 aa2.69□□□□□ -1.98
LRPPRC-206ENST00000463456 TEX15Q9BXT5 2789 aa2.69□□□□□ -1.98
LRPPRC-206ENST00000463456 DNAH7Q8WXX0 4024 aa2.69□□□□□ -1.98
LRPPRC-206ENST00000463456 IGF2RP11717 2491 aa2.69□□□□□ -1.98
LRPPRC-206ENST00000463456 PRKDCP78527 4128 aaKnown RBP2.68□□□□□ -1.98
LRPPRC-206ENST00000463456 TYMSOSQ8TAI1 123 aa2.68□□□□□ -1.98
LRPPRC-206ENST00000463456 CUBNO60494 3623 aa2.68□□□□□ -1.98
LRPPRC-206ENST00000463456 USP9XQ93008 2570 aaPredicted RBP2.68□□□□□ -1.98
LRPPRC-206ENST00000463456 NAV2Q8IVL1 2488 aa2.68□□□□□ -1.98
LRPPRC-206ENST00000463456 RPL37P61927 97 aaKnown RBP2.67□□□□□ -1.98
LRPPRC-206ENST00000463456 KRTAP1-3Q8IUG1 177 aa2.67□□□□□ -1.98
LRPPRC-206ENST00000463456 PTPN13Q12923 2485 aa2.67□□□□□ -1.98
LRPPRC-206ENST00000463456 SPG11Q96JI7 2443 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms