RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 BAALC-AS2P0C853 105 aa8.52□□□□□ -1.05
COL6A1-202ENST00000463060 FAM229BQ4G0N7 80 aa8.52□□□□□ -1.05
COL6A1-202ENST00000463060 GTF2H5Q6ZYL4 71 aa8.52□□□□□ -1.05
COL6A1-202ENST00000463060 LINC01600Q96MT4 127 aa8.52□□□□□ -1.05
COL6A1-202ENST00000463060 TMEM256-PLSCR3K7ERE1 68 aa8.51□□□□□ -1.05
COL6A1-202ENST00000463060 PRO0461Q9UI25 63 aa8.51□□□□□ -1.05
COL6A1-202ENST00000463060 A0A087X002 238 aa8.5□□□□□ -1.05
COL6A1-202ENST00000463060 GHRHP01286 108 aa8.5□□□□□ -1.05
COL6A1-202ENST00000463060 HERC1Q15751 4861 aa8.49□□□□□ -1.05
COL6A1-202ENST00000463060 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
COL6A1-202ENST00000463060 C3orf22Q8N5N4 141 aa8.49□□□□□ -1.05
COL6A1-202ENST00000463060 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
COL6A1-202ENST00000463060 UBE2V1Q13404 147 aa8.48□□□□□ -1.05
COL6A1-202ENST00000463060 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
COL6A1-202ENST00000463060 H3BT86 120 aa8.47□□□□□ -1.05
COL6A1-202ENST00000463060 NDUFV3P56181 108 aaKnown RBP8.47□□□□□ -1.05
COL6A1-202ENST00000463060 MTURNQ8N3F0 131 aa8.47□□□□□ -1.05
COL6A1-202ENST00000463060 SVIPQ8NHG7 77 aa8.47□□□□□ -1.05
COL6A1-202ENST00000463060 FLG2Q5D862 2391 aaPredicted RBP8.47□□□□□ -1.05
COL6A1-202ENST00000463060 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.05
COL6A1-202ENST00000463060 IGLV8-61A0A075B6I0 122 aa8.46□□□□□ -1.06
COL6A1-202ENST00000463060 CRYGAP11844 174 aa8.46□□□□□ -1.06
COL6A1-202ENST00000463060 ANKRD29Q8N6D5 301 aa8.46□□□□□ -1.06
COL6A1-202ENST00000463060 LAMTOR3Q9UHA4 124 aa8.46□□□□□ -1.06
COL6A1-202ENST00000463060 PRR26Q8N8Z3 221 aa8.45□□□□□ -1.06
COL6A1-202ENST00000463060 F8W1H4 67 aa8.44□□□□□ -1.06
COL6A1-202ENST00000463060 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
COL6A1-202ENST00000463060 TNXBP22105 4242 aa8.43□□□□□ -1.06
COL6A1-202ENST00000463060 MYCBP2O75592 4640 aa8.43□□□□□ -1.06
COL6A1-202ENST00000463060 OBSCN-AS1Q96MR7 158 aa8.42□□□□□ -1.06
COL6A1-202ENST00000463060 IGLV9-49A0A0B4J1Y8 123 aa8.41□□□□□ -1.06
COL6A1-202ENST00000463060 SSBP3-AS1Q7Z2R9 100 aa8.41□□□□□ -1.06
COL6A1-202ENST00000463060 OXTP01178 125 aa8.4□□□□□ -1.06
COL6A1-202ENST00000463060 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
COL6A1-202ENST00000463060 MOBPQ13875 183 aa8.4□□□□□ -1.06
COL6A1-202ENST00000463060 Q8NBF4 154 aa8.39□□□□□ -1.07
COL6A1-202ENST00000463060 KRTAP29-1A8MX34 341 aaPredicted RBP8.38□□□□□ -1.07
COL6A1-202ENST00000463060 F8WEM9 126 aa8.38□□□□□ -1.07
COL6A1-202ENST00000463060 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
COL6A1-202ENST00000463060 JMJD7-PLA2G4BH0Y9G9 81 aa8.37□□□□□ -1.07
COL6A1-202ENST00000463060 A0A0G2JQZ4 141 aa8.36□□□□□ -1.07
COL6A1-202ENST00000463060 TRBV7-4A0A0J9YYF1 115 aa8.36□□□□□ -1.07
COL6A1-202ENST00000463060 RBM3P98179 157 aaKnown RBP8.36□□□□□ -1.07
COL6A1-202ENST00000463060 C9orf153Q5TBE3 101 aa8.36□□□□□ -1.07
COL6A1-202ENST00000463060 Q6JHZ5 121 aa8.36□□□□□ -1.07
COL6A1-202ENST00000463060 IGFL1Q6UW32 110 aa8.36□□□□□ -1.07
COL6A1-202ENST00000463060 A0A1B0GV72 72 aa8.33□□□□□ -1.08
COL6A1-202ENST00000463060 ETDBQ3ZM63 59 aa8.33□□□□□ -1.08
COL6A1-202ENST00000463060 TEN1Q86WV5 123 aa8.33□□□□□ -1.08
COL6A1-202ENST00000463060 LOC110117498A0A087WWA1 95 aa8.32□□□□□ -1.08
COL6A1-202ENST00000463060 A0A1W2PNM2 257 aa8.31□□□□□ -1.08
COL6A1-202ENST00000463060 Q6Q795 121 aa8.31□□□□□ -1.08
COL6A1-202ENST00000463060 CD164Q04900 197 aa8.3□□□□□ -1.08
COL6A1-202ENST00000463060 Q6ZQT0 140 aa8.3□□□□□ -1.08
COL6A1-202ENST00000463060 DSCR8Q96T75 97 aa8.3□□□□□ -1.08
COL6A1-202ENST00000463060 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
COL6A1-202ENST00000463060 PDE6GP18545 87 aa8.29□□□□□ -1.08
COL6A1-202ENST00000463060 LINC00304Q8N9R0 145 aa8.28□□□□□ -1.08
COL6A1-202ENST00000463060 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.09
COL6A1-202ENST00000463060 SPAG11AQ6PDA7 123 aa8.27□□□□□ -1.09
COL6A1-202ENST00000463060 CCKP06307 115 aa8.26□□□□□ -1.09
COL6A1-202ENST00000463060 SPINK1P00995 79 aa8.25□□□□□ -1.09
COL6A1-202ENST00000463060 TRBV7-7A0A0K0K1E9 115 aa8.24□□□□□ -1.09
COL6A1-202ENST00000463060 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
COL6A1-202ENST00000463060 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
COL6A1-202ENST00000463060 C21orf62-AS1Q17RA5 79 aa8.23□□□□□ -1.09
COL6A1-202ENST00000463060 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
COL6A1-202ENST00000463060 Q5XG85 94 aa8.22□□□□□ -1.09
COL6A1-202ENST00000463060 A0A1B0GW54 56 aa8.21□□□□□ -1.1
COL6A1-202ENST00000463060 J3QL48 77 aa8.19□□□□□ -1.1
COL6A1-202ENST00000463060 A0A087WSZ3 146 aa8.18□□□□□ -1.1
COL6A1-202ENST00000463060 VPS25Q9BRG1 176 aa8.18□□□□□ -1.1
COL6A1-202ENST00000463060 ASB16-AS1Q495Z4 193 aa8.17□□□□□ -1.1
COL6A1-202ENST00000463060 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
COL6A1-202ENST00000463060 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
COL6A1-202ENST00000463060 Q96NJ1 140 aa8.12□□□□□ -1.11
COL6A1-202ENST00000463060 LINC00846Q9NV44 126 aa8.12□□□□□ -1.11
COL6A1-202ENST00000463060 C1orf195Q5TG92 126 aa8.11□□□□□ -1.11
COL6A1-202ENST00000463060 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
COL6A1-202ENST00000463060 FAM240AA0A1B0GVK7 77 aa8.1□□□□□ -1.11
COL6A1-202ENST00000463060 ACYP1P07311 99 aa8.08□□□□□ -1.12
COL6A1-202ENST00000463060 HMCN2Q8NDA2 5059 aa8.07□□□□□ -1.12
COL6A1-202ENST00000463060 NREPQ16612 68 aa8.06□□□□□ -1.12
COL6A1-202ENST00000463060 Q6ZVQ6 151 aa8.06□□□□□ -1.12
COL6A1-202ENST00000463060 RETNLBQ9BQ08 111 aa8.05□□□□□ -1.12
COL6A1-202ENST00000463060 J3QR89 54 aa8.04□□□□□ -1.12
COL6A1-202ENST00000463060 UBR4Q5T4S7 5183 aa8.03□□□□□ -1.12
COL6A1-202ENST00000463060 DEFB116Q30KQ4 102 aa8.02□□□□□ -1.13
COL6A1-202ENST00000463060 FP248Q71RG6 208 aaPredicted RBP8.02□□□□□ -1.13
COL6A1-202ENST00000463060 UBL5Q9BZL1 73 aa8.02□□□□□ -1.13
COL6A1-202ENST00000463060 K7ERU9 68 aa8□□□□□ -1.13
COL6A1-202ENST00000463060 J3KT08 172 aa7.99□□□□□ -1.13
COL6A1-202ENST00000463060 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
COL6A1-202ENST00000463060 DSCR10P59022 87 aa7.98□□□□□ -1.13
COL6A1-202ENST00000463060 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
COL6A1-202ENST00000463060 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.14
COL6A1-202ENST00000463060 SIGMAR1Q99720 223 aa7.96□□□□□ -1.14
COL6A1-202ENST00000463060 BPY2O14599 106 aa7.95□□□□□ -1.14
COL6A1-202ENST00000463060 PRR4Q16378 134 aa7.95□□□□□ -1.14
COL6A1-202ENST00000463060 IGKV3D-7A0A0C4DH55 119 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms