RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 Q8NDZ9 215 aa9.61□□□□□ -0.87
HDAC7-217ENST00000459625 EPG5Q9HCE0 2579 aa9.61□□□□□ -0.87
HDAC7-217ENST00000459625 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
HDAC7-217ENST00000459625 OXTP01178 125 aa9.57□□□□□ -0.88
HDAC7-217ENST00000459625 ROMO1P60602 79 aa9.57□□□□□ -0.88
HDAC7-217ENST00000459625 LINC01558Q9Y6Z2 57 aa9.55□□□□□ -0.88
HDAC7-217ENST00000459625 ATRQ13535 2644 aa9.55□□□□□ -0.88
HDAC7-217ENST00000459625 FP248Q71RG6 208 aaPredicted RBP9.53□□□□□ -0.88
HDAC7-217ENST00000459625 H3BS24 57 aa9.53□□□□□ -0.88
HDAC7-217ENST00000459625 LINC00472Q9H8W2 130 aa9.49□□□□□ -0.89
HDAC7-217ENST00000459625 KRTAP26-1Q6PEX3 210 aa9.46□□□□□ -0.9
HDAC7-217ENST00000459625 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.9
HDAC7-217ENST00000459625 CEP350Q5VT06 3117 aa9.45□□□□□ -0.9
HDAC7-217ENST00000459625 MAST4O15021 2626 aa9.45□□□□□ -0.9
HDAC7-217ENST00000459625 Q6ZR54 194 aa9.45□□□□□ -0.9
HDAC7-217ENST00000459625 PANO1I0J062 215 aa9.44□□□□□ -0.9
HDAC7-217ENST00000459625 SPRR1AP35321 89 aa9.43□□□□□ -0.9
HDAC7-217ENST00000459625 Q5VV11 94 aa9.43□□□□□ -0.9
HDAC7-217ENST00000459625 A0A087X002 238 aa9.41□□□□□ -0.9
HDAC7-217ENST00000459625 C5orf42Q9H799 3197 aa9.4□□□□□ -0.9
HDAC7-217ENST00000459625 PCNTO95613 3336 aa9.39□□□□□ -0.91
HDAC7-217ENST00000459625 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
HDAC7-217ENST00000459625 CYSTM1Q9H1C7 97 aa9.37□□□□□ -0.91
HDAC7-217ENST00000459625 FLNAP21333 2647 aaKnown RBP9.36□□□□□ -0.91
HDAC7-217ENST00000459625 PRRC2CQ9Y520 2896 aaKnown RBP9.36□□□□□ -0.91
HDAC7-217ENST00000459625 ITPR3Q14573 2671 aa9.36□□□□□ -0.91
HDAC7-217ENST00000459625 A8MUU9 505 aa9.33□□□□□ -0.92
HDAC7-217ENST00000459625 SPRR1BP22528 89 aa9.32□□□□□ -0.92
HDAC7-217ENST00000459625 CFAP46Q8IYW2 2715 aa9.3□□□□□ -0.92
HDAC7-217ENST00000459625 A8MU10 97 aa9.27□□□□□ -0.93
HDAC7-217ENST00000459625 Q5XG85 94 aa9.26□□□□□ -0.93
HDAC7-217ENST00000459625 STAB1Q9NY15 2570 aa9.25□□□□□ -0.93
HDAC7-217ENST00000459625 HELZ2Q9BYK8 2649 aaKnown RBP9.24□□□□□ -0.93
HDAC7-217ENST00000459625 NOTCH2NLQ7Z3S9 236 aa9.24□□□□□ -0.93
HDAC7-217ENST00000459625 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
HDAC7-217ENST00000459625 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.94
HDAC7-217ENST00000459625 C10orf95Q9H7T3 257 aa9.12□□□□□ -0.95
HDAC7-217ENST00000459625 AKAP13Q12802 2813 aa9.1□□□□□ -0.95
HDAC7-217ENST00000459625 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
HDAC7-217ENST00000459625 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
HDAC7-217ENST00000459625 TEX15Q9BXT5 2789 aa9.08□□□□□ -0.96
HDAC7-217ENST00000459625 KRTAP10-8P60410 259 aa9.04□□□□□ -0.96
HDAC7-217ENST00000459625 TNP1P09430 55 aa9.03□□□□□ -0.96
HDAC7-217ENST00000459625 KRTAP16-1A8MUX0 517 aa9.01□□□□□ -0.97
HDAC7-217ENST00000459625 SETXQ7Z333 2677 aaKnown RBP9.01□□□□□ -0.97
HDAC7-217ENST00000459625 CHD6Q8TD26 2715 aa9□□□□□ -0.97
HDAC7-217ENST00000459625 TEP1Q99973 2627 aaKnown RBP8.99□□□□□ -0.97
HDAC7-217ENST00000459625 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-217ENST00000459625 STAB2Q8WWQ8 2551 aa8.97□□□□□ -0.97
HDAC7-217ENST00000459625 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
HDAC7-217ENST00000459625 KRTAP29-1A8MX34 341 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-217ENST00000459625 CFAP54Q96N23 3096 aa8.93□□□□□ -0.98
HDAC7-217ENST00000459625 A0A0C4DFX4 3053 aa8.93□□□□□ -0.98
HDAC7-217ENST00000459625 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
HDAC7-217ENST00000459625 NDUFAF8A1L188 74 aa8.92□□□□□ -0.98
HDAC7-217ENST00000459625 CENPEQ02224 2701 aa8.87□□□□□ -0.99
HDAC7-217ENST00000459625 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
HDAC7-217ENST00000459625 UNC79Q9P2D8 2635 aa8.85□□□□□ -0.99
HDAC7-217ENST00000459625 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
HDAC7-217ENST00000459625 BRCA2P51587 3418 aa8.83□□□□□ -1
HDAC7-217ENST00000459625 MKI67P46013 3256 aaKnown RBP8.82□□□□□ -1
HDAC7-217ENST00000459625 KRTAP10-10P60014 251 aa8.8□□□□□ -1
HDAC7-217ENST00000459625 COL6A5A8TX70 2615 aa8.79□□□□□ -1
HDAC7-217ENST00000459625 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
HDAC7-217ENST00000459625 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
HDAC7-217ENST00000459625 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
HDAC7-217ENST00000459625 MGAQ8IWI9 3026 aa8.72□□□□□ -1.01
HDAC7-217ENST00000459625 FRYQ5TBA9 3013 aa8.72□□□□□ -1.01
HDAC7-217ENST00000459625 LAMA3Q16787 3333 aa8.71□□□□□ -1.02
HDAC7-217ENST00000459625 CHD7Q9P2D1 2997 aa8.67□□□□□ -1.02
HDAC7-217ENST00000459625 NOTCH1P46531 2555 aa8.67□□□□□ -1.02
HDAC7-217ENST00000459625 FREM2Q5SZK8 3169 aa8.66□□□□□ -1.02
HDAC7-217ENST00000459625 RANBP2P49792 3224 aaKnown RBP8.66□□□□□ -1.02
HDAC7-217ENST00000459625 LAMA2P24043 3122 aaKnown RBP8.66□□□□□ -1.02
HDAC7-217ENST00000459625 XIRP2A4UGR9 3374 aa8.66□□□□□ -1.02
HDAC7-217ENST00000459625 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.02
HDAC7-217ENST00000459625 CRYBG3Q68DQ2 2970 aa8.63□□□□□ -1.03
HDAC7-217ENST00000459625 UNC80Q8N2C7 3258 aa8.62□□□□□ -1.03
HDAC7-217ENST00000459625 A6NN06 94 aa8.61□□□□□ -1.03
HDAC7-217ENST00000459625 XP32Q5T750 250 aa8.61□□□□□ -1.03
HDAC7-217ENST00000459625 NBEAL2Q6ZNJ1 2754 aa8.61□□□□□ -1.03
HDAC7-217ENST00000459625 HTTP42858 3142 aa8.58□□□□□ -1.04
HDAC7-217ENST00000459625 KRTAP13-1Q8IUC0 172 aa8.58□□□□□ -1.04
HDAC7-217ENST00000459625 TRIOO75962 3097 aa8.58□□□□□ -1.04
HDAC7-217ENST00000459625 P0C880 135 aa8.57□□□□□ -1.04
HDAC7-217ENST00000459625 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
HDAC7-217ENST00000459625 CELSR3Q9NYQ7 3312 aa8.55□□□□□ -1.04
HDAC7-217ENST00000459625 PRO2289Q9P1D8 64 aa8.54□□□□□ -1.04
HDAC7-217ENST00000459625 WDFY4Q6ZS81 3184 aa8.53□□□□□ -1.04
HDAC7-217ENST00000459625 KMT2BQ9UMN6 2715 aaPredicted RBP8.51□□□□□ -1.05
HDAC7-217ENST00000459625 CDH23Q9H251 3354 aa8.5□□□□□ -1.05
HDAC7-217ENST00000459625 ZNF292O60281 2723 aa8.46□□□□□ -1.06
HDAC7-217ENST00000459625 ITPR2Q14571 2701 aa8.46□□□□□ -1.06
HDAC7-217ENST00000459625 REV3LO60673 3130 aa8.45□□□□□ -1.06
HDAC7-217ENST00000459625 KRTAP21-3Q3LHN1 58 aa8.41□□□□□ -1.06
HDAC7-217ENST00000459625 DNAH14Q0VDD8 3507 aa8.4□□□□□ -1.06
HDAC7-217ENST00000459625 IGSF10Q6WRI0 2623 aa8.4□□□□□ -1.07
HDAC7-217ENST00000459625 PP632Q6XCG6 107 aa8.39□□□□□ -1.07
HDAC7-217ENST00000459625 NSD1Q96L73 2696 aaPredicted RBP8.39□□□□□ -1.07
HDAC7-217ENST00000459625 CHD9Q3L8U1 2897 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms