RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 SPRR1BP22528 89 aa8.43□□□□□ -1.06
RAPGEF3-205ENST00000449771 R4GN34 69 aa8.43□□□□□ -1.06
RAPGEF3-205ENST00000449771 FLNBO75369 2602 aaKnown RBP8.43□□□□□ -1.06
RAPGEF3-205ENST00000449771 USP24Q9UPU5 2620 aa8.42□□□□□ -1.06
RAPGEF3-205ENST00000449771 A6NN06 94 aa8.42□□□□□ -1.06
RAPGEF3-205ENST00000449771 LINC00472Q9H8W2 130 aa8.41□□□□□ -1.06
RAPGEF3-205ENST00000449771 KRTAP16-1A8MUX0 517 aa8.41□□□□□ -1.06
RAPGEF3-205ENST00000449771 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
RAPGEF3-205ENST00000449771 FLNAP21333 2647 aaKnown RBP8.34□□□□□ -1.07
RAPGEF3-205ENST00000449771 ROMO1P60602 79 aa8.3□□□□□ -1.08
RAPGEF3-205ENST00000449771 BPTFQ12830 3046 aa8.3□□□□□ -1.08
RAPGEF3-205ENST00000449771 ITPR3Q14573 2671 aa8.3□□□□□ -1.08
RAPGEF3-205ENST00000449771 M0QZ58 72 aa8.29□□□□□ -1.08
RAPGEF3-205ENST00000449771 DNAH12Q6ZR08 3092 aa8.26□□□□□ -1.09
RAPGEF3-205ENST00000449771 PANO1I0J062 215 aa8.24□□□□□ -1.09
RAPGEF3-205ENST00000449771 HELZ2Q9BYK8 2649 aaKnown RBP8.23□□□□□ -1.09
RAPGEF3-205ENST00000449771 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
RAPGEF3-205ENST00000449771 Q6ZR54 194 aa8.21□□□□□ -1.1
RAPGEF3-205ENST00000449771 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.1
RAPGEF3-205ENST00000449771 KRTAP25-1Q3LHN0 102 aa8.21□□□□□ -1.1
RAPGEF3-205ENST00000449771 ADM2Q7Z4H4 148 aa8.21□□□□□ -1.1
RAPGEF3-205ENST00000449771 ATRQ13535 2644 aa8.2□□□□□ -1.1
RAPGEF3-205ENST00000449771 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
RAPGEF3-205ENST00000449771 H1FX-AS1Q4G0G2 97 aa8.19□□□□□ -1.1
RAPGEF3-205ENST00000449771 A8MU10 97 aa8.18□□□□□ -1.1
RAPGEF3-205ENST00000449771 PCNTO95613 3336 aa8.17□□□□□ -1.1
RAPGEF3-205ENST00000449771 A0A087X002 238 aa8.17□□□□□ -1.1
RAPGEF3-205ENST00000449771 PRRC2CQ9Y520 2896 aaKnown RBP8.17□□□□□ -1.1
RAPGEF3-205ENST00000449771 MAST4O15021 2626 aa8.17□□□□□ -1.1
RAPGEF3-205ENST00000449771 KRTAP4-16G5E9R7 235 aaPredicted RBP8.13□□□□□ -1.11
RAPGEF3-205ENST00000449771 NDUFAF8A1L188 74 aa8.11□□□□□ -1.11
RAPGEF3-205ENST00000449771 CEP350Q5VT06 3117 aa8.09□□□□□ -1.12
RAPGEF3-205ENST00000449771 CFAP46Q8IYW2 2715 aa8.08□□□□□ -1.12
RAPGEF3-205ENST00000449771 KRTAP29-1A8MX34 341 aaPredicted RBP8.08□□□□□ -1.12
RAPGEF3-205ENST00000449771 C5orf42Q9H799 3197 aa8.06□□□□□ -1.12
RAPGEF3-205ENST00000449771 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
RAPGEF3-205ENST00000449771 RPS29P62273 56 aaKnown RBP8□□□□□ -1.13
RAPGEF3-205ENST00000449771 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
RAPGEF3-205ENST00000449771 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
RAPGEF3-205ENST00000449771 CHD7Q9P2D1 2997 aa7.98□□□□□ -1.13
RAPGEF3-205ENST00000449771 STAB1Q9NY15 2570 aa7.93□□□□□ -1.14
RAPGEF3-205ENST00000449771 A8MUU9 505 aa7.92□□□□□ -1.14
RAPGEF3-205ENST00000449771 MKI67P46013 3256 aaKnown RBP7.91□□□□□ -1.14
RAPGEF3-205ENST00000449771 KRTAP13-2Q52LG2 175 aa7.89□□□□□ -1.15
RAPGEF3-205ENST00000449771 C20orf166-AS1Q96NR2 134 aa7.88□□□□□ -1.15
RAPGEF3-205ENST00000449771 KRTAP7-1Q8IUC3 87 aa7.87□□□□□ -1.15
RAPGEF3-205ENST00000449771 TEX15Q9BXT5 2789 aa7.87□□□□□ -1.15
RAPGEF3-205ENST00000449771 BRCA2P51587 3418 aa7.85□□□□□ -1.15
RAPGEF3-205ENST00000449771 CHD9Q3L8U1 2897 aa7.82□□□□□ -1.16
RAPGEF3-205ENST00000449771 NBEAL1Q6ZS30 2694 aa7.82□□□□□ -1.16
RAPGEF3-205ENST00000449771 CHD6Q8TD26 2715 aa7.81□□□□□ -1.16
RAPGEF3-205ENST00000449771 TEP1Q99973 2627 aaKnown RBP7.8□□□□□ -1.16
RAPGEF3-205ENST00000449771 KRTAP13-1Q8IUC0 172 aa7.79□□□□□ -1.16
RAPGEF3-205ENST00000449771 KRTAP21-3Q3LHN1 58 aa7.79□□□□□ -1.16
RAPGEF3-205ENST00000449771 HTTP42858 3142 aa7.77□□□□□ -1.17
RAPGEF3-205ENST00000449771 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
RAPGEF3-205ENST00000449771 CENPEQ02224 2701 aa7.77□□□□□ -1.17
RAPGEF3-205ENST00000449771 LAMA3Q16787 3333 aa7.77□□□□□ -1.17
RAPGEF3-205ENST00000449771 MGAQ8IWI9 3026 aa7.76□□□□□ -1.17
RAPGEF3-205ENST00000449771 AKAP13Q12802 2813 aa7.75□□□□□ -1.17
RAPGEF3-205ENST00000449771 COL6A5A8TX70 2615 aa7.72□□□□□ -1.17
RAPGEF3-205ENST00000449771 RANBP2P49792 3224 aaKnown RBP7.72□□□□□ -1.17
RAPGEF3-205ENST00000449771 SETXQ7Z333 2677 aaKnown RBP7.69□□□□□ -1.18
RAPGEF3-205ENST00000449771 BAHCC1Q9P281 2608 aa7.69□□□□□ -1.18
RAPGEF3-205ENST00000449771 DMBT1Q9UGM3 2413 aaPredicted RBP7.69□□□□□ -1.18
RAPGEF3-205ENST00000449771 UNC79Q9P2D8 2635 aa7.68□□□□□ -1.18
RAPGEF3-205ENST00000449771 GCN1Q92616 2671 aaKnown RBP7.68□□□□□ -1.18
RAPGEF3-205ENST00000449771 CFAP54Q96N23 3096 aa7.66□□□□□ -1.18
RAPGEF3-205ENST00000449771 TNP1P09430 55 aa7.65□□□□□ -1.18
RAPGEF3-205ENST00000449771 ZNF292O60281 2723 aa7.64□□□□□ -1.19
RAPGEF3-205ENST00000449771 PRUNE2Q8WUY3 3088 aa7.63□□□□□ -1.19
RAPGEF3-205ENST00000449771 CDH23Q9H251 3354 aa7.6□□□□□ -1.19
RAPGEF3-205ENST00000449771 A0A0C4DFX4 3053 aa7.6□□□□□ -1.19
RAPGEF3-205ENST00000449771 TRANK1O15050 2925 aa7.59□□□□□ -1.19
RAPGEF3-205ENST00000449771 IGSF10Q6WRI0 2623 aa7.58□□□□□ -1.2
RAPGEF3-205ENST00000449771 NOTCH1P46531 2555 aa7.57□□□□□ -1.2
RAPGEF3-205ENST00000449771 LAMA2P24043 3122 aaKnown RBP7.56□□□□□ -1.2
RAPGEF3-205ENST00000449771 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
RAPGEF3-205ENST00000449771 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
RAPGEF3-205ENST00000449771 UNC80Q8N2C7 3258 aa7.54□□□□□ -1.2
RAPGEF3-205ENST00000449771 XP32Q5T750 250 aa7.53□□□□□ -1.2
RAPGEF3-205ENST00000449771 C10orf95Q9H7T3 257 aa7.52□□□□□ -1.21
RAPGEF3-205ENST00000449771 WDFY4Q6ZS81 3184 aa7.51□□□□□ -1.21
RAPGEF3-205ENST00000449771 ITPR2Q14571 2701 aa7.51□□□□□ -1.21
RAPGEF3-205ENST00000449771 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
RAPGEF3-205ENST00000449771 XIRP2A4UGR9 3374 aa7.48□□□□□ -1.21
RAPGEF3-205ENST00000449771 DSPP15924 2871 aaKnown RBP7.47□□□□□ -1.21
RAPGEF3-205ENST00000449771 KRTAP1-4P0C5Y4 121 aa7.47□□□□□ -1.21
RAPGEF3-205ENST00000449771 STAB2Q8WWQ8 2551 aa7.46□□□□□ -1.22
RAPGEF3-205ENST00000449771 TRIOO75962 3097 aa7.45□□□□□ -1.22
RAPGEF3-205ENST00000449771 NSD1Q96L73 2696 aaPredicted RBP7.44□□□□□ -1.22
RAPGEF3-205ENST00000449771 FRYQ5TBA9 3013 aa7.43□□□□□ -1.22
RAPGEF3-205ENST00000449771 SZT2Q5T011 3432 aa7.43□□□□□ -1.22
RAPGEF3-205ENST00000449771 H0YAA0 97 aa7.43□□□□□ -1.22
RAPGEF3-205ENST00000449771 UBR5O95071 2799 aaPredicted RBP7.42□□□□□ -1.22
RAPGEF3-205ENST00000449771 KMT2BQ9UMN6 2715 aaPredicted RBP7.4□□□□□ -1.22
RAPGEF3-205ENST00000449771 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
RAPGEF3-205ENST00000449771 P0C880 135 aa7.39□□□□□ -1.23
RAPGEF3-205ENST00000449771 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
RAPGEF3-205ENST00000449771 MAP1AP78559 2803 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms