RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 LINC00575Q6W349 94 aa14.96□□□□□ -0.01
CBX4-202ENST00000448310 VAMP3Q15836 100 aa14.94□□□□□ -0.02
CBX4-202ENST00000448310 Q6ZQY7 126 aa14.94□□□□□ -0.02
CBX4-202ENST00000448310 SNRPEP62304 92 aaKnown RBP14.9□□□□□ -0.02
CBX4-202ENST00000448310 hADV29S1A0JD25 119 aa14.89□□□□□ -0.03
CBX4-202ENST00000448310 IGFL1Q6UW32 110 aa14.89□□□□□ -0.03
CBX4-202ENST00000448310 CLEC2BQ92478 149 aa14.88□□□□□ -0.03
CBX4-202ENST00000448310 TRBV7-7A0A0K0K1E9 115 aa14.87□□□□□ -0.03
CBX4-202ENST00000448310 Q6JHZ5 121 aa14.87□□□□□ -0.03
CBX4-202ENST00000448310 OCIAD2Q56VL3 154 aa14.83□□□□□ -0.04
CBX4-202ENST00000448310 OBSCN-AS1Q96MR7 158 aa14.81□□□□□ -0.04
CBX4-202ENST00000448310 C12orf57Q99622 126 aa14.79□□□□□ -0.04
CBX4-202ENST00000448310 HSBP1L1C9JCN9 74 aa14.78□□□□□ -0.04
CBX4-202ENST00000448310 HIST3H2BBQ8N257 126 aa14.78□□□□□ -0.04
CBX4-202ENST00000448310 HIST1H2BLQ99880 126 aa14.78□□□□□ -0.04
CBX4-202ENST00000448310 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.77□□□□□ -0.05
CBX4-202ENST00000448310 S100A2P29034 98 aa14.74□□□□□ -0.05
CBX4-202ENST00000448310 ATP11AUNQ6ZP68 121 aa14.74□□□□□ -0.05
CBX4-202ENST00000448310 H3BUT2 72 aa14.73□□□□□ -0.05
CBX4-202ENST00000448310 Q6Q795 121 aa14.73□□□□□ -0.05
CBX4-202ENST00000448310 Q75L30 129 aa14.73□□□□□ -0.05
CBX4-202ENST00000448310 SNHG12Q9BXW3 62 aa14.72□□□□□ -0.05
CBX4-202ENST00000448310 BVES-AS1Q5T3Y7 98 aa14.7□□□□□ -0.06
CBX4-202ENST00000448310 LST1O00453 97 aa14.69□□□□□ -0.06
CBX4-202ENST00000448310 PPDPFLQ8WWR9 84 aa14.69□□□□□ -0.06
CBX4-202ENST00000448310 HIST1H4GQ99525 98 aa14.68□□□□□ -0.06
CBX4-202ENST00000448310 Q96NJ1 140 aa14.65□□□□□ -0.06
CBX4-202ENST00000448310 SCGB1D1O95968 90 aa14.61□□□□□ -0.07
CBX4-202ENST00000448310 COX8AP10176 69 aa14.57□□□□□ -0.08
CBX4-202ENST00000448310 SS18L2Q9UHA2 77 aa14.56□□□□□ -0.08
CBX4-202ENST00000448310 CFC1P0CG37 223 aa14.55□□□□□ -0.08
CBX4-202ENST00000448310 S100A6P06703 90 aa14.54□□□□□ -0.08
CBX4-202ENST00000448310 FAM218AQ96MZ4 157 aa14.53□□□□□ -0.08
CBX4-202ENST00000448310 C20orf166-AS1Q96NR2 134 aa14.53□□□□□ -0.08
CBX4-202ENST00000448310 NDUFV3P56181 108 aaKnown RBP14.51□□□□□ -0.09
CBX4-202ENST00000448310 TEN1Q86WV5 123 aa14.51□□□□□ -0.09
CBX4-202ENST00000448310 RAB37Q96AX2 223 aa14.51□□□□□ -0.09
CBX4-202ENST00000448310 A0A087WSZ3 146 aa14.49□□□□□ -0.09
CBX4-202ENST00000448310 A8MUU9 505 aa14.49□□□□□ -0.09
CBX4-202ENST00000448310 DLEU1O43261 78 aa14.47□□□□□ -0.09
CBX4-202ENST00000448310 H0YGX0 51 aa14.46□□□□□ -0.09
CBX4-202ENST00000448310 SNCGO76070 127 aa14.46□□□□□ -0.09
CBX4-202ENST00000448310 C14orf144Q96I85 54 aa14.45□□□□□ -0.1
CBX4-202ENST00000448310 A0A0B4J2C4 111 aa14.43□□□□□ -0.1
CBX4-202ENST00000448310 DSCR10P59022 87 aa14.43□□□□□ -0.1
CBX4-202ENST00000448310 H3BMG7 143 aa14.41□□□□□ -0.1
CBX4-202ENST00000448310 KRTAP9-8Q9BYQ0 159 aa14.39□□□□□ -0.11
CBX4-202ENST00000448310 TRBV20-1A0A075B6N2 111 aa14.38□□□□□ -0.11
CBX4-202ENST00000448310 FABP2P12104 132 aa14.38□□□□□ -0.11
CBX4-202ENST00000448310 HIGD1BQ9P298 99 aa14.38□□□□□ -0.11
CBX4-202ENST00000448310 PAM16Q9Y3D7 125 aa14.37□□□□□ -0.11
CBX4-202ENST00000448310 USH2AO75445 5202 aa14.37□□□□□ -0.11
CBX4-202ENST00000448310 C2orf91Q6ZV80 131 aa14.36□□□□□ -0.11
CBX4-202ENST00000448310 SIGMAR1Q99720 223 aa14.36□□□□□ -0.11
CBX4-202ENST00000448310 A0A1W2PNM2 257 aa14.35□□□□□ -0.11
CBX4-202ENST00000448310 SPATA45Q537H7 98 aa14.34□□□□□ -0.11
CBX4-202ENST00000448310 SSPOA2VEC9 5147 aa14.31□□□□□ -0.12
CBX4-202ENST00000448310 A0A1B0GX51 115 aa14.31□□□□□ -0.12
CBX4-202ENST00000448310 KRTAP16-1A8MUX0 517 aa14.29□□□□□ -0.12
CBX4-202ENST00000448310 CEND1Q8N111 149 aa14.29□□□□□ -0.12
CBX4-202ENST00000448310 PRO1854Q9UHT4 67 aa14.29□□□□□ -0.12
CBX4-202ENST00000448310 GHRHP01286 108 aa14.28□□□□□ -0.12
CBX4-202ENST00000448310 S100A1P23297 94 aa14.28□□□□□ -0.12
CBX4-202ENST00000448310 A0A1B0GV72 72 aa14.26□□□□□ -0.13
CBX4-202ENST00000448310 TRIAP1O43715 76 aa14.25□□□□□ -0.13
CBX4-202ENST00000448310 LINC00313P59037 77 aa14.25□□□□□ -0.13
CBX4-202ENST00000448310 IGKV4-1P06312 121 aa14.24□□□□□ -0.13
CBX4-202ENST00000448310 VAMP8Q9BV40 100 aa14.24□□□□□ -0.13
CBX4-202ENST00000448310 FXYD2P54710 66 aa14.23□□□□□ -0.13
CBX4-202ENST00000448310 FAM236DA0A1B0GTK5 79 aa14.21□□□□□ -0.13
CBX4-202ENST00000448310 TMEM238LA0A1B0GVL6 79 aa14.21□□□□□ -0.13
CBX4-202ENST00000448310 A6NJY4 79 aa14.21□□□□□ -0.13
CBX4-202ENST00000448310 FAM236CP0DP71 79 aa14.21□□□□□ -0.13
CBX4-202ENST00000448310 ANKRD29Q8N6D5 301 aa14.21□□□□□ -0.13
CBX4-202ENST00000448310 NOTCH2NLQ7Z3S9 236 aa14.2□□□□□ -0.14
CBX4-202ENST00000448310 TRBV7-4A0A0J9YYF1 115 aa14.18□□□□□ -0.14
CBX4-202ENST00000448310 DEFB116Q30KQ4 102 aa14.18□□□□□ -0.14
CBX4-202ENST00000448310 KRTAP9-1A8MXZ3 250 aaPredicted RBP14.17□□□□□ -0.14
CBX4-202ENST00000448310 MT2AP02795 61 aa14.16□□□□□ -0.14
CBX4-202ENST00000448310 ORMDL1Q9P0S3 153 aa14.15□□□□□ -0.14
CBX4-202ENST00000448310 DNAL4O96015 105 aa14.14□□□□□ -0.15
CBX4-202ENST00000448310 HRES1P13985 223 aa14.13□□□□□ -0.15
CBX4-202ENST00000448310 LINC00472Q9H8W2 130 aa14.11□□□□□ -0.15
CBX4-202ENST00000448310 KRTAP9-7A8MTY7 169 aa14.1□□□□□ -0.15
CBX4-202ENST00000448310 MPLKIPQ8TAP9 179 aa14.1□□□□□ -0.15
CBX4-202ENST00000448310 IGHV6-1A0A0B4J1U7 121 aa14.09□□□□□ -0.15
CBX4-202ENST00000448310 K7ERJ3 54 aa14.08□□□□□ -0.16
CBX4-202ENST00000448310 CCKP06307 115 aa14.08□□□□□ -0.16
CBX4-202ENST00000448310 PSMB2P49721 201 aa14.08□□□□□ -0.16
CBX4-202ENST00000448310 RBM12B-AS1Q9P1G2 102 aa14.08□□□□□ -0.16
CBX4-202ENST00000448310 TRACP01848 142 aa14.06□□□□□ -0.16
CBX4-202ENST00000448310 MT1FP04733 61 aa14.06□□□□□ -0.16
CBX4-202ENST00000448310 H3BQ85 93 aa14.04□□□□□ -0.16
CBX4-202ENST00000448310 TMEM256-PLSCR3K7ERE1 68 aa14.04□□□□□ -0.16
CBX4-202ENST00000448310 FCGBPQ9Y6R7 5405 aaPredicted RBP14.01□□□□□ -0.17
CBX4-202ENST00000448310 LCE2BO14633 110 aa14□□□□□ -0.17
CBX4-202ENST00000448310 HSD52Q0P140 79 aa14□□□□□ -0.17
CBX4-202ENST00000448310 COX6CP09669 75 aa13.98□□□□□ -0.17
CBX4-202ENST00000448310 VPS25Q9BRG1 176 aa13.97□□□□□ -0.17
CBX4-202ENST00000448310 KRTAP10-10P60014 251 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms