RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MINOS1Q5TGZ0 78 aa0.58□□□□□ -2.32
PMS1-216ENST00000447734 USP24Q9UPU5 2620 aa0.58□□□□□ -2.32
PMS1-216ENST00000447734 REV3LO60673 3130 aa0.58□□□□□ -2.32
PMS1-216ENST00000447734 UGGT1Q9NYU2 1555 aa0.57□□□□□ -2.32
PMS1-216ENST00000447734 PDE4DIPQ5VU43 2346 aa0.57□□□□□ -2.32
PMS1-216ENST00000447734 DEFB135Q30KP9 77 aa0.57□□□□□ -2.32
PMS1-216ENST00000447734 BPTFQ12830 3046 aa0.56□□□□□ -2.32
PMS1-216ENST00000447734 NAV2Q8IVL1 2488 aa0.56□□□□□ -2.32
PMS1-216ENST00000447734 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
PMS1-216ENST00000447734 MAST1Q9Y2H9 1570 aa0.56□□□□□ -2.32
PMS1-216ENST00000447734 ABCA2Q9BZC7 2435 aa0.56□□□□□ -2.32
PMS1-216ENST00000447734 KIF1AQ12756 1690 aa0.56□□□□□ -2.32
PMS1-216ENST00000447734 PRM1P04553 51 aa0.55□□□□□ -2.32
PMS1-216ENST00000447734 PTPN13Q12923 2485 aa0.54□□□□□ -2.32
PMS1-216ENST00000447734 IGIPA6NJ69 53 aa0.53□□□□□ -2.32
PMS1-216ENST00000447734 CHD8Q9HCK8 2581 aa0.53□□□□□ -2.32
PMS1-216ENST00000447734 BSNQ9UPA5 3926 aa0.52□□□□□ -2.33
PMS1-216ENST00000447734 H0YGG7 62 aa0.52□□□□□ -2.33
PMS1-216ENST00000447734 C6orf48Q9UBA6 75 aa0.52□□□□□ -2.33
PMS1-216ENST00000447734 CROCC2H7BZ55 1655 aa0.52□□□□□ -2.33
PMS1-216ENST00000447734 ITSN2Q9NZM3 1697 aa0.51□□□□□ -2.33
PMS1-216ENST00000447734 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
PMS1-216ENST00000447734 SYCP2Q9BX26 1530 aa0.5□□□□□ -2.33
PMS1-216ENST00000447734 NCOR2Q9Y618 2525 aa0.5□□□□□ -2.33
PMS1-216ENST00000447734 TRANK1O15050 2925 aa0.5□□□□□ -2.33
PMS1-216ENST00000447734 TNXBP22105 4242 aa0.49□□□□□ -2.33
PMS1-216ENST00000447734 EP300Q09472 2414 aaPredicted RBP0.49□□□□□ -2.33
PMS1-216ENST00000447734 MROH2AA6NES4 1674 aa0.49□□□□□ -2.33
PMS1-216ENST00000447734 FAT2Q9NYQ8 4349 aa0.49□□□□□ -2.33
PMS1-216ENST00000447734 TENM3Q9P273 2699 aa0.48□□□□□ -2.33
PMS1-216ENST00000447734 RPS27P42677 84 aaKnown RBP0.48□□□□□ -2.33
PMS1-216ENST00000447734 RPS27LQ71UM5 84 aaKnown RBP0.48□□□□□ -2.33
PMS1-216ENST00000447734 LRP1Q07954 4544 aaKnown RBP0.48□□□□□ -2.33
PMS1-216ENST00000447734 WT1-ASQ06250 92 aa0.47□□□□□ -2.33
PMS1-216ENST00000447734 TMEM167BQ9NRX6 74 aa0.47□□□□□ -2.33
PMS1-216ENST00000447734 UBR5O95071 2799 aaPredicted RBP0.47□□□□□ -2.33
PMS1-216ENST00000447734 H0YGX0 51 aa0.46□□□□□ -2.34
PMS1-216ENST00000447734 CLASP1Q7Z460 1538 aa0.46□□□□□ -2.34
PMS1-216ENST00000447734 DSPP15924 2871 aaKnown RBP0.45□□□□□ -2.34
PMS1-216ENST00000447734 HIVEP3Q5T1R4 2406 aa0.45□□□□□ -2.34
PMS1-216ENST00000447734 HUWE1Q7Z6Z7 4374 aaKnown RBP0.45□□□□□ -2.34
PMS1-216ENST00000447734 PRKDCP78527 4128 aaKnown RBP0.45□□□□□ -2.34
PMS1-216ENST00000447734 PRLHP81277 87 aa0.45□□□□□ -2.34
PMS1-216ENST00000447734 S4R3F8 94 aa0.45□□□□□ -2.34
PMS1-216ENST00000447734 ALMS1Q8TCU4 4167 aa0.45□□□□□ -2.34
PMS1-216ENST00000447734 ADCY10Q96PN6 1610 aa0.45□□□□□ -2.34
PMS1-216ENST00000447734 WNK1Q9H4A3 2382 aa0.45□□□□□ -2.34
PMS1-216ENST00000447734 CELSR1Q9NYQ6 3014 aa0.44□□□□□ -2.34
PMS1-216ENST00000447734 FANCD2Q9BXW9 1451 aa0.44□□□□□ -2.34
PMS1-216ENST00000447734 SPRR2DP22532 72 aa0.44□□□□□ -2.34
PMS1-216ENST00000447734 PLNP26678 52 aa0.44□□□□□ -2.34
PMS1-216ENST00000447734 DEFB106AQ8N104 65 aa0.44□□□□□ -2.34
PMS1-216ENST00000447734 IGSF10Q6WRI0 2623 aa0.44□□□□□ -2.34
PMS1-216ENST00000447734 CDC42BPAQ5VT25 1732 aa0.44□□□□□ -2.34
PMS1-216ENST00000447734 ANKRD36CQ5JPF3 1778 aa0.43□□□□□ -2.34
PMS1-216ENST00000447734 LINC00308Q8TCZ7 52 aa0.43□□□□□ -2.34
PMS1-216ENST00000447734 AGLP35573 1532 aa0.43□□□□□ -2.34
PMS1-216ENST00000447734 DSTQ03001 7570 aaKnown RBP0.43□□□□□ -2.34
PMS1-216ENST00000447734 TOGARAM1Q9Y4F4 1720 aa0.42□□□□□ -2.34
PMS1-216ENST00000447734 MAP1BP46821 2468 aaKnown RBP0.42□□□□□ -2.34
PMS1-216ENST00000447734 SYNE2Q8WXH0 6885 aaKnown RBP0.42□□□□□ -2.34
PMS1-216ENST00000447734 HRNRQ86YZ3 2850 aaPredicted RBP0.42□□□□□ -2.34
PMS1-216ENST00000447734 APC2O95996 2303 aa0.42□□□□□ -2.34
PMS1-216ENST00000447734 SNRPGP15A8MWD9 76 aa0.41□□□□□ -2.34
PMS1-216ENST00000447734 CMC2Q9NRP2 79 aa0.41□□□□□ -2.34
PMS1-216ENST00000447734 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
PMS1-216ENST00000447734 H3BUA1 57 aa0.4□□□□□ -2.35
PMS1-216ENST00000447734 AKAP13Q12802 2813 aa0.39□□□□□ -2.35
PMS1-216ENST00000447734 KMT2AQ03164 3969 aa0.39□□□□□ -2.35
PMS1-216ENST00000447734 HECTD1Q9ULT8 2610 aa0.38□□□□□ -2.35
PMS1-216ENST00000447734 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
PMS1-216ENST00000447734 SETXQ7Z333 2677 aaKnown RBP0.38□□□□□ -2.35
PMS1-216ENST00000447734 TIMM8BQ9Y5J9 83 aaPredicted RBP0.38□□□□□ -2.35
PMS1-216ENST00000447734 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
PMS1-216ENST00000447734 CACNA1AO00555 2505 aa0.38□□□□□ -2.35
PMS1-216ENST00000447734 ACANP16112 2415 aa0.38□□□□□ -2.35
PMS1-216ENST00000447734 EFCAB6Q5THR3 1501 aa0.38□□□□□ -2.35
PMS1-216ENST00000447734 MYCBP2O75592 4640 aa0.37□□□□□ -2.35
PMS1-216ENST00000447734 PCNX1Q96RV3 2341 aa0.37□□□□□ -2.35
PMS1-216ENST00000447734 ABCC8Q09428 1581 aa0.37□□□□□ -2.35
PMS1-216ENST00000447734 NBASA2RRP1 2371 aa0.37□□□□□ -2.35
PMS1-216ENST00000447734 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
PMS1-216ENST00000447734 ABRACLQ9P1F3 81 aa0.36□□□□□ -2.35
PMS1-216ENST00000447734 MAST4O15021 2626 aa0.36□□□□□ -2.35
PMS1-216ENST00000447734 NEBP20929 6669 aa0.36□□□□□ -2.35
PMS1-216ENST00000447734 SPRR2BP35325 72 aa0.35□□□□□ -2.35
PMS1-216ENST00000447734 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
PMS1-216ENST00000447734 ABCA5Q8WWZ7 1642 aa0.35□□□□□ -2.35
PMS1-216ENST00000447734 KMT2DO14686 5537 aa0.34□□□□□ -2.35
PMS1-216ENST00000447734 PRRC2CQ9Y520 2896 aaKnown RBP0.34□□□□□ -2.35
PMS1-216ENST00000447734 TNRC18O15417 2968 aaPredicted RBP0.34□□□□□ -2.36
PMS1-216ENST00000447734 LPAP08519 4548 aa0.34□□□□□ -2.36
PMS1-216ENST00000447734 NRXN3Q9Y4C0 1643 aa0.33□□□□□ -2.36
PMS1-216ENST00000447734 CREBBPQ92793 2442 aa0.32□□□□□ -2.36
PMS1-216ENST00000447734 SMIM27A0A1W2PRY6 76 aa0.32□□□□□ -2.36
PMS1-216ENST00000447734 C9orf92A6NGG3 77 aa0.32□□□□□ -2.36
PMS1-216ENST00000447734 FLNBO75369 2602 aaKnown RBP0.32□□□□□ -2.36
PMS1-216ENST00000447734 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
PMS1-216ENST00000447734 H3BNG1 76 aa0.31□□□□□ -2.36
PMS1-216ENST00000447734 NOP10Q9NPE3 64 aaKnown RBP0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms