RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SPART-AS1P0CW21 52 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 ACYP2P14621 99 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 KRTAP13-3Q3SY46 172 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 PCOTHQ58A44 107 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 IGFL1Q6UW32 110 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 TACC2O95359 2948 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 MMP24-AS1A0A0U1RRL7 71 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 H3BNG1 76 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 MIR22HGQ0VDD5 57 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 SPTAN1Q13813 2472 aaKnown RBP2.54□□□□□ -2
HMGB1P16-201ENST00000447155 CREBBPQ92793 2442 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 AKAP13Q12802 2813 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 MYO15AQ9UKN7 3530 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 SPTA1P02549 2419 aa2.53□□□□□ -2
HMGB1P16-201ENST00000447155 IGKV2-24A0A0C4DH68 120 aa2.53□□□□□ -2
HMGB1P16-201ENST00000447155 HRES1P13985 223 aa2.53□□□□□ -2
HMGB1P16-201ENST00000447155 ZNF706Q9Y5V0 76 aaPredicted RBP2.53□□□□□ -2
HMGB1P16-201ENST00000447155 MAP1AP78559 2803 aaPredicted RBP2.53□□□□□ -2
HMGB1P16-201ENST00000447155 SPEGQ15772 3267 aa2.53□□□□□ -2
HMGB1P16-201ENST00000447155 DMXL2Q8TDJ6 3036 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 HTN3P15516 51 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 RPL37AP61513 92 aaKnown RBP2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 NCOR2Q9Y618 2525 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 OTOGLQ3ZCN5 2332 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 DCHS1Q96JQ0 3298 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 TLN1Q9Y490 2541 aaKnown RBP2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 LINC01556Q5JQF7 62 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 CELSR3Q9NYQ7 3312 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 C2CD3Q4AC94 2353 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 KMT2BQ9UMN6 2715 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 SPRR1BP22528 89 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 DEFB135Q30KP9 77 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 CSAG1Q6PB30 78 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 MRPL34Q9BQ48 92 aaKnown RBP2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 PRO3102Q9H379 93 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 LINC00472Q9H8W2 130 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 C8orf17Q9NRJ1 99 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 DMDP11532 3685 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 WDFY4Q6ZS81 3184 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 TLN2Q9Y4G6 2542 aa2.49□□□□□ -2.01
HMGB1P16-201ENST00000447155 IGHV6-1A0A0B4J1U7 121 aa2.49□□□□□ -2.01
HMGB1P16-201ENST00000447155 C1orf134Q5TEV5 83 aa2.49□□□□□ -2.01
HMGB1P16-201ENST00000447155 HIVEP3Q5T1R4 2406 aa2.49□□□□□ -2.01
HMGB1P16-201ENST00000447155 LRBAP50851 2863 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 K7ERS5 55 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 DEFB123Q8N688 67 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 ANKRD17O75179 2603 aaKnown RBP2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 SPENQ96T58 3664 aaKnown RBP2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 SPG11Q96JI7 2443 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 CHD6Q8TD26 2715 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 DCHS2Q6V1P9 2916 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 ROMO1P60602 79 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 PRLHP81277 87 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 ADM2Q7Z4H4 148 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 NBASA2RRP1 2371 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 MYO9AB2RTY4 2548 aa2.46□□□□□ -2.01
HMGB1P16-201ENST00000447155 KRTAP26-1Q6PEX3 210 aa2.46□□□□□ -2.02
HMGB1P16-201ENST00000447155 ADGRG4Q8IZF6 3080 aa2.46□□□□□ -2.02
HMGB1P16-201ENST00000447155 CSPG4Q6UVK1 2322 aa2.46□□□□□ -2.02
HMGB1P16-201ENST00000447155 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
HMGB1P16-201ENST00000447155 KRTAP25-1Q3LHN0 102 aa2.45□□□□□ -2.02
HMGB1P16-201ENST00000447155 CEP295Q9C0D2 2601 aa2.45□□□□□ -2.02
HMGB1P16-201ENST00000447155 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 SETXQ7Z333 2677 aaKnown RBP2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 DEFB4AO15263 64 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 LY6G6CO95867 125 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 IGLV7-43P04211 117 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 JMJD1CQ15652 2540 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 SMG1Q96Q15 3661 aaKnown RBP2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 KRTAP10-8P60410 259 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 DEFB113Q30KQ7 82 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 BOD1L1Q8NFC6 3051 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 GVINP1Q7Z2Y8 2422 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 ZFHX4Q86UP3 3567 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 EYSQ5T1H1 3165 aa2.42□□□□□ -2.02
HMGB1P16-201ENST00000447155 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
HMGB1P16-201ENST00000447155 CELSR2Q9HCU4 2923 aa2.42□□□□□ -2.02
HMGB1P16-201ENST00000447155 BDP1A6H8Y1 2624 aa2.42□□□□□ -2.02
HMGB1P16-201ENST00000447155 SPTBN4Q9H254 2564 aa2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 Q96NJ1 140 aa2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 CSMD1Q96PZ7 3565 aa2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 GCN1Q92616 2671 aaKnown RBP2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 ITPR1Q14643 2758 aa2.4□□□□□ -2.02
HMGB1P16-201ENST00000447155 A0A096LNI7 61 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 A0A0G2JQZ4 141 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 A0A1W2PNN7 141 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 A8MUU9 505 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 KRTAP13-2Q52LG2 175 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 LOC400499M0QZD8 3231 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 CELSR1Q9NYQ6 3014 aa2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 UTP20O75691 2785 aaKnown RBP2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 ASH1LQ9NR48 2969 aaKnown RBP2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 ZNF292O60281 2723 aa2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 DMXL1Q9Y485 3027 aa2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 DOPEY1Q5JWR5 2465 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 1163.8 ms