RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
LAPTM4B-201ENST00000445593 PANO1I0J062 215 aa10.64□□□□□ -0.71
LAPTM4B-201ENST00000445593 DHRS4-AS1Q9P1J3 65 aa10.64□□□□□ -0.71
LAPTM4B-201ENST00000445593 LINC01547P58512 204 aaPredicted RBP10.64□□□□□ -0.71
LAPTM4B-201ENST00000445593 CNBPP62633 177 aaKnown RBP10.63□□□□□ -0.71
LAPTM4B-201ENST00000445593 Q8N9L7 120 aa10.63□□□□□ -0.71
LAPTM4B-201ENST00000445593 DYNC2H1Q8NCM8 4307 aaKnown RBP10.62□□□□□ -0.71
LAPTM4B-201ENST00000445593 SPRR1AP35321 89 aa10.62□□□□□ -0.71
LAPTM4B-201ENST00000445593 H3BQ85 93 aa10.61□□□□□ -0.71
LAPTM4B-201ENST00000445593 PDE6GP18545 87 aa10.6□□□□□ -0.71
LAPTM4B-201ENST00000445593 PRR4Q16378 134 aa10.6□□□□□ -0.71
LAPTM4B-201ENST00000445593 C14orf177Q52M58 125 aa10.6□□□□□ -0.71
LAPTM4B-201ENST00000445593 C4orf48Q5BLP8 95 aa10.6□□□□□ -0.71
LAPTM4B-201ENST00000445593 SPTSSBQ8NFR3 76 aa10.58□□□□□ -0.72
LAPTM4B-201ENST00000445593 Q6ZRN7 208 aaPredicted RBP10.57□□□□□ -0.72
LAPTM4B-201ENST00000445593 C1orf137Q5JT78 98 aa10.57□□□□□ -0.72
LAPTM4B-201ENST00000445593 C9orf163Q8N9P6 203 aa10.57□□□□□ -0.72
LAPTM4B-201ENST00000445593 TRAV7A0A075B6U4 112 aa10.56□□□□□ -0.72
LAPTM4B-201ENST00000445593 EPM2AB3EWF7 344 aa10.55□□□□□ -0.72
LAPTM4B-201ENST00000445593 NREPQ16612 68 aa10.55□□□□□ -0.72
LAPTM4B-201ENST00000445593 ATP5EP2Q5VTU8 51 aa10.55□□□□□ -0.72
LAPTM4B-201ENST00000445593 LY6G6CO95867 125 aa10.54□□□□□ -0.72
LAPTM4B-201ENST00000445593 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.54□□□□□ -0.72
LAPTM4B-201ENST00000445593 VPS13DQ5THJ4 4388 aa10.53□□□□□ -0.72
LAPTM4B-201ENST00000445593 A0A1W2PNM2 257 aa10.53□□□□□ -0.72
LAPTM4B-201ENST00000445593 UBE2AP49459 152 aa10.51□□□□□ -0.73
LAPTM4B-201ENST00000445593 CD164Q04900 197 aa10.51□□□□□ -0.73
LAPTM4B-201ENST00000445593 BPY2O14599 106 aa10.51□□□□□ -0.73
LAPTM4B-201ENST00000445593 IGLV5-48A0A075B6I7 105 aa10.5□□□□□ -0.73
LAPTM4B-201ENST00000445593 A0A087WTM6 91 aa10.5□□□□□ -0.73
LAPTM4B-201ENST00000445593 KLKP1Q107X0 134 aa10.5□□□□□ -0.73
LAPTM4B-201ENST00000445593 DNAH2Q9P225 4427 aa10.5□□□□□ -0.73
LAPTM4B-201ENST00000445593 LINC00476Q8WZB0 136 aa10.49□□□□□ -0.73
LAPTM4B-201ENST00000445593 DEFB116Q30KQ4 102 aa10.48□□□□□ -0.73
LAPTM4B-201ENST00000445593 SMIM29Q86T20 159 aa10.48□□□□□ -0.73
LAPTM4B-201ENST00000445593 RBM12B-AS1Q9P1G2 102 aa10.48□□□□□ -0.73
LAPTM4B-201ENST00000445593 TNP2Q05952 138 aa10.46□□□□□ -0.74
LAPTM4B-201ENST00000445593 TMEM254Q8TBM7 123 aa10.46□□□□□ -0.74
LAPTM4B-201ENST00000445593 RTL8CO15255 209 aa10.45□□□□□ -0.74
LAPTM4B-201ENST00000445593 CXCL6P80162 114 aa10.44□□□□□ -0.74
LAPTM4B-201ENST00000445593 Q8NBF4 154 aa10.44□□□□□ -0.74
LAPTM4B-201ENST00000445593 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
LAPTM4B-201ENST00000445593 HECTD4Q9Y4D8 3996 aa10.42□□□□□ -0.74
LAPTM4B-201ENST00000445593 PRR15Q8IV56 129 aa10.41□□□□□ -0.74
LAPTM4B-201ENST00000445593 H3BS24 57 aa10.4□□□□□ -0.74
LAPTM4B-201ENST00000445593 A8MUN3 132 aa10.4□□□□□ -0.75
LAPTM4B-201ENST00000445593 FRAS1Q86XX4 4008 aa10.4□□□□□ -0.75
LAPTM4B-201ENST00000445593 A0A087WSZ3 146 aa10.39□□□□□ -0.75
LAPTM4B-201ENST00000445593 C1orf134Q5TEV5 83 aa10.39□□□□□ -0.75
LAPTM4B-201ENST00000445593 SPACA4Q8TDM5 124 aa10.39□□□□□ -0.75
LAPTM4B-201ENST00000445593 IGLV5-52A0A0A0MRZ9 124 aa10.38□□□□□ -0.75
LAPTM4B-201ENST00000445593 Q6ZR54 194 aa10.38□□□□□ -0.75
LAPTM4B-201ENST00000445593 IGKV4-1P06312 121 aa10.38□□□□□ -0.75
LAPTM4B-201ENST00000445593 IGLV9-49A0A0B4J1Y8 123 aa10.36□□□□□ -0.75
LAPTM4B-201ENST00000445593 ANAPC11Q9NYG5 84 aa10.36□□□□□ -0.75
LAPTM4B-201ENST00000445593 BCE1O60756 84 aa10.35□□□□□ -0.75
LAPTM4B-201ENST00000445593 DNAH6Q9C0G6 4158 aa10.34□□□□□ -0.75
LAPTM4B-201ENST00000445593 K7EQZ3 153 aa10.32□□□□□ -0.76
LAPTM4B-201ENST00000445593 PSORS1C2Q9UIG4 136 aa10.32□□□□□ -0.76
LAPTM4B-201ENST00000445593 NDUFC1O43677 76 aa10.31□□□□□ -0.76
LAPTM4B-201ENST00000445593 RPL37AP61513 92 aaKnown RBP10.31□□□□□ -0.76
LAPTM4B-201ENST00000445593 SPRR4Q96PI1 79 aa10.31□□□□□ -0.76
LAPTM4B-201ENST00000445593 TRAV22A0A0B4J277 110 aa10.31□□□□□ -0.76
LAPTM4B-201ENST00000445593 FAM30AQ9NZY2 134 aa10.31□□□□□ -0.76
LAPTM4B-201ENST00000445593 CHKB-CPT1BH3BT56 60 aa10.3□□□□□ -0.76
LAPTM4B-201ENST00000445593 HYDINQ4G0P3 5121 aa10.29□□□□□ -0.76
LAPTM4B-201ENST00000445593 DSCR10P59022 87 aa10.28□□□□□ -0.76
LAPTM4B-201ENST00000445593 C1orf64Q8NEQ6 169 aa10.28□□□□□ -0.76
LAPTM4B-201ENST00000445593 DNAH17Q9UFH2 4485 aa10.28□□□□□ -0.76
LAPTM4B-201ENST00000445593 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
LAPTM4B-201ENST00000445593 ATP5EP56381 51 aaPredicted RBP10.26□□□□□ -0.77
LAPTM4B-201ENST00000445593 DNAH8Q96JB1 4490 aa10.26□□□□□ -0.77
LAPTM4B-201ENST00000445593 DNAH11Q96DT5 4516 aa10.26□□□□□ -0.77
LAPTM4B-201ENST00000445593 H0Y9J4 135 aa10.25□□□□□ -0.77
LAPTM4B-201ENST00000445593 KRTAP13-1Q8IUC0 172 aa10.25□□□□□ -0.77
LAPTM4B-201ENST00000445593 WFDC13Q8IUB5 93 aa10.24□□□□□ -0.77
LAPTM4B-201ENST00000445593 KTN1-AS1Q86SY8 53 aa10.23□□□□□ -0.77
LAPTM4B-201ENST00000445593 WWC2-AS2Q96NR7 200 aa10.23□□□□□ -0.77
LAPTM4B-201ENST00000445593 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
LAPTM4B-201ENST00000445593 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
LAPTM4B-201ENST00000445593 MOBPQ13875 183 aa10.2□□□□□ -0.78
LAPTM4B-201ENST00000445593 PLAC8Q9NZF1 115 aa10.19□□□□□ -0.78
LAPTM4B-201ENST00000445593 SPRR1BP22528 89 aa10.19□□□□□ -0.78
LAPTM4B-201ENST00000445593 DNAH5Q8TE73 4624 aa10.18□□□□□ -0.78
LAPTM4B-201ENST00000445593 A0A1B0GW54 56 aa10.18□□□□□ -0.78
LAPTM4B-201ENST00000445593 CIRBP-AS1Q8TBR5 109 aa10.16□□□□□ -0.78
LAPTM4B-201ENST00000445593 HCG22E2RYF7 251 aa10.16□□□□□ -0.78
LAPTM4B-201ENST00000445593 PRR15LQ9BU68 103 aa10.16□□□□□ -0.78
LAPTM4B-201ENST00000445593 OCR1Q9BZK8 76 aa10.15□□□□□ -0.78
LAPTM4B-201ENST00000445593 A6NED7 52 aa10.15□□□□□ -0.78
LAPTM4B-201ENST00000445593 C8orf87E5RJ46 101 aa10.14□□□□□ -0.79
LAPTM4B-201ENST00000445593 ZNF861PO60384 105 aa10.14□□□□□ -0.79
LAPTM4B-201ENST00000445593 KRTAP10-1P60331 282 aa10.1□□□□□ -0.79
LAPTM4B-201ENST00000445593 PRAC1Q96KF2 57 aa10.1□□□□□ -0.79
LAPTM4B-201ENST00000445593 Q1T7F1 81 aa10.1□□□□□ -0.79
LAPTM4B-201ENST00000445593 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
LAPTM4B-201ENST00000445593 Q5VV11 94 aa10.08□□□□□ -0.8
LAPTM4B-201ENST00000445593 LRP1BQ9NZR2 4599 aa10.08□□□□□ -0.8
LAPTM4B-201ENST00000445593 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
LAPTM4B-201ENST00000445593 LINC00472Q9H8W2 130 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms