RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 SPRR1BP22528 89 aa3.18□□□□□ -1.9
SCN11A-202ENST00000444237 K7EIL1 84 aa3.17□□□□□ -1.9
SCN11A-202ENST00000444237 HECTD1Q9ULT8 2610 aa3.17□□□□□ -1.9
SCN11A-202ENST00000444237 A0A0C4DFX4 3053 aa3.17□□□□□ -1.9
SCN11A-202ENST00000444237 Q8N1X5 172 aa3.17□□□□□ -1.9
SCN11A-202ENST00000444237 VCANP13611 3396 aa3.17□□□□□ -1.9
SCN11A-202ENST00000444237 ABCA2Q9BZC7 2435 aa3.16□□□□□ -1.9
SCN11A-202ENST00000444237 Q5W150 140 aa3.16□□□□□ -1.9
SCN11A-202ENST00000444237 LRRK2Q5S007 2527 aa3.16□□□□□ -1.9
SCN11A-202ENST00000444237 WDFY4Q6ZS81 3184 aa3.16□□□□□ -1.9
SCN11A-202ENST00000444237 POLQO75417 2590 aa3.15□□□□□ -1.9
SCN11A-202ENST00000444237 A0A0D9SG42 100 aa3.15□□□□□ -1.9
SCN11A-202ENST00000444237 TLN2Q9Y4G6 2542 aa3.15□□□□□ -1.9
SCN11A-202ENST00000444237 ZNF861PO60384 105 aa3.15□□□□□ -1.9
SCN11A-202ENST00000444237 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
SCN11A-202ENST00000444237 KRTAP26-1Q6PEX3 210 aa3.14□□□□□ -1.91
SCN11A-202ENST00000444237 DNAH14Q0VDD8 3507 aa3.14□□□□□ -1.91
SCN11A-202ENST00000444237 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
SCN11A-202ENST00000444237 CFAP54Q96N23 3096 aa3.13□□□□□ -1.91
SCN11A-202ENST00000444237 ABCA12Q86UK0 2595 aa3.13□□□□□ -1.91
SCN11A-202ENST00000444237 F8P00451 2351 aa3.13□□□□□ -1.91
SCN11A-202ENST00000444237 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
SCN11A-202ENST00000444237 H1FX-AS1Q4G0G2 97 aa3.12□□□□□ -1.91
SCN11A-202ENST00000444237 MGAQ8IWI9 3026 aa3.12□□□□□ -1.91
SCN11A-202ENST00000444237 KRTAP4-16G5E9R7 235 aaPredicted RBP3.12□□□□□ -1.91
SCN11A-202ENST00000444237 LAMA1P25391 3075 aa3.12□□□□□ -1.91
SCN11A-202ENST00000444237 USP34Q70CQ2 3546 aa3.12□□□□□ -1.91
SCN11A-202ENST00000444237 PLAC8Q9NZF1 115 aa3.11□□□□□ -1.91
SCN11A-202ENST00000444237 CASC10Q5T4H9 136 aa3.11□□□□□ -1.91
SCN11A-202ENST00000444237 TYMSOSQ8TAI1 123 aa3.11□□□□□ -1.91
SCN11A-202ENST00000444237 HELZ2Q9BYK8 2649 aaKnown RBP3.11□□□□□ -1.91
SCN11A-202ENST00000444237 IGSF10Q6WRI0 2623 aa3.11□□□□□ -1.91
SCN11A-202ENST00000444237 JMJD1CQ15652 2540 aa3.1□□□□□ -1.91
SCN11A-202ENST00000444237 A8MUU9 505 aa3.1□□□□□ -1.91
SCN11A-202ENST00000444237 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
SCN11A-202ENST00000444237 VPS13AQ96RL7 3174 aa3.1□□□□□ -1.91
SCN11A-202ENST00000444237 USP9YO00507 2555 aaPredicted RBP3.1□□□□□ -1.91
SCN11A-202ENST00000444237 USP9XQ93008 2570 aaPredicted RBP3.1□□□□□ -1.91
SCN11A-202ENST00000444237 MYO15AQ9UKN7 3530 aa3.1□□□□□ -1.91
SCN11A-202ENST00000444237 NOTCH2NLQ7Z3S9 236 aa3.09□□□□□ -1.91
SCN11A-202ENST00000444237 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.91
SCN11A-202ENST00000444237 DSPP15924 2871 aaKnown RBP3.09□□□□□ -1.92
SCN11A-202ENST00000444237 ACANP16112 2415 aa3.09□□□□□ -1.92
SCN11A-202ENST00000444237 NBDYA0A0U1RRE5 68 aa3.09□□□□□ -1.92
SCN11A-202ENST00000444237 DMXL1Q9Y485 3027 aa3.09□□□□□ -1.92
SCN11A-202ENST00000444237 FLG2Q5D862 2391 aaPredicted RBP3.08□□□□□ -1.92
SCN11A-202ENST00000444237 PANO1I0J062 215 aa3.08□□□□□ -1.92
SCN11A-202ENST00000444237 PSORS1C2Q9UIG4 136 aa3.08□□□□□ -1.92
SCN11A-202ENST00000444237 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
SCN11A-202ENST00000444237 FRYQ5TBA9 3013 aa3.08□□□□□ -1.92
SCN11A-202ENST00000444237 FLNBO75369 2602 aaKnown RBP3.07□□□□□ -1.92
SCN11A-202ENST00000444237 PRRC2CQ9Y520 2896 aaKnown RBP3.07□□□□□ -1.92
SCN11A-202ENST00000444237 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
SCN11A-202ENST00000444237 ZFHX3Q15911 3703 aa3.06□□□□□ -1.92
SCN11A-202ENST00000444237 CFAP46Q8IYW2 2715 aa3.06□□□□□ -1.92
SCN11A-202ENST00000444237 KRTAP11-1Q8IUC1 163 aa3.05□□□□□ -1.92
SCN11A-202ENST00000444237 SETD2Q9BYW2 2564 aaPredicted RBP3.05□□□□□ -1.92
SCN11A-202ENST00000444237 FLNAP21333 2647 aaKnown RBP3.04□□□□□ -1.92
SCN11A-202ENST00000444237 COX6B2Q6YFQ2 88 aa3.04□□□□□ -1.92
SCN11A-202ENST00000444237 LINC00304Q8N9R0 145 aa3.04□□□□□ -1.92
SCN11A-202ENST00000444237 ITPR3Q14573 2671 aa3.04□□□□□ -1.92
SCN11A-202ENST00000444237 DMDP11532 3685 aa3.03□□□□□ -1.92
SCN11A-202ENST00000444237 MTORP42345 2549 aa3.03□□□□□ -1.92
SCN11A-202ENST00000444237 CELSR3Q9NYQ7 3312 aa3.03□□□□□ -1.92
SCN11A-202ENST00000444237 DMXL2Q8TDJ6 3036 aa3.02□□□□□ -1.93
SCN11A-202ENST00000444237 FRYLO94915 3013 aa3.02□□□□□ -1.93
SCN11A-202ENST00000444237 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
SCN11A-202ENST00000444237 FREM2Q5SZK8 3169 aa3□□□□□ -1.93
SCN11A-202ENST00000444237 A0A087WTM6 91 aa3□□□□□ -1.93
SCN11A-202ENST00000444237 SPEGQ15772 3267 aa2.99□□□□□ -1.93
SCN11A-202ENST00000444237 CHD6Q8TD26 2715 aa2.98□□□□□ -1.93
SCN11A-202ENST00000444237 GCN1Q92616 2671 aaKnown RBP2.98□□□□□ -1.93
SCN11A-202ENST00000444237 BOD1L1Q8NFC6 3051 aa2.97□□□□□ -1.93
SCN11A-202ENST00000444237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.97□□□□□ -1.93
SCN11A-202ENST00000444237 S4R3F8 94 aa2.97□□□□□ -1.93
SCN11A-202ENST00000444237 UNC79Q9P2D8 2635 aa2.96□□□□□ -1.93
SCN11A-202ENST00000444237 MUC3AQ02505 3323 aa2.95□□□□□ -1.94
SCN11A-202ENST00000444237 Q6ZSA8 131 aa2.95□□□□□ -1.94
SCN11A-202ENST00000444237 KMT2BQ9UMN6 2715 aaPredicted RBP2.94□□□□□ -1.94
SCN11A-202ENST00000444237 SMR3BP02814 79 aaPredicted RBP2.94□□□□□ -1.94
SCN11A-202ENST00000444237 CENPEQ02224 2701 aa2.94□□□□□ -1.94
SCN11A-202ENST00000444237 ATMQ13315 3056 aa2.94□□□□□ -1.94
SCN11A-202ENST00000444237 WDFY3Q8IZQ1 3526 aa2.94□□□□□ -1.94
SCN11A-202ENST00000444237 UBR5O95071 2799 aaPredicted RBP2.94□□□□□ -1.94
SCN11A-202ENST00000444237 ITPR1Q14643 2758 aa2.93□□□□□ -1.94
SCN11A-202ENST00000444237 H0YAA0 97 aa2.93□□□□□ -1.94
SCN11A-202ENST00000444237 KRTAP7-1Q8IUC3 87 aa2.93□□□□□ -1.94
SCN11A-202ENST00000444237 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
SCN11A-202ENST00000444237 ASPMQ8IZT6 3477 aa2.91□□□□□ -1.94
SCN11A-202ENST00000444237 TEP1Q99973 2627 aaKnown RBP2.91□□□□□ -1.94
SCN11A-202ENST00000444237 DCHS1Q96JQ0 3298 aa2.91□□□□□ -1.94
SCN11A-202ENST00000444237 LAMA5O15230 3695 aa2.91□□□□□ -1.94
SCN11A-202ENST00000444237 NBEAQ8NFP9 2946 aa2.9□□□□□ -1.94
SCN11A-202ENST00000444237 UTP20O75691 2785 aaKnown RBP2.9□□□□□ -1.94
SCN11A-202ENST00000444237 LRBAP50851 2863 aa2.9□□□□□ -1.94
SCN11A-202ENST00000444237 LOC400499M0QZD8 3231 aa2.9□□□□□ -1.95
SCN11A-202ENST00000444237 Q5VSD8 79 aa2.9□□□□□ -1.95
SCN11A-202ENST00000444237 COL12A1Q99715 3063 aa2.9□□□□□ -1.95
SCN11A-202ENST00000444237 MAST4O15021 2626 aa2.9□□□□□ -1.95
SCN11A-202ENST00000444237 P0C880 135 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms