RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 COL6A3P12111 3177 aa6.43□□□□□ -1.38
LIN54-202ENST00000442461 SPATA8Q6RVD6 105 aa6.43□□□□□ -1.38
LIN54-202ENST00000442461 ADM2Q7Z4H4 148 aa6.43□□□□□ -1.38
LIN54-202ENST00000442461 ZNF861PO60384 105 aa6.42□□□□□ -1.38
LIN54-202ENST00000442461 A0A0D9SG42 100 aa6.42□□□□□ -1.38
LIN54-202ENST00000442461 KRTAP16-1A8MUX0 517 aa6.42□□□□□ -1.38
LIN54-202ENST00000442461 DMBT1Q9UGM3 2413 aaPredicted RBP6.41□□□□□ -1.38
LIN54-202ENST00000442461 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
LIN54-202ENST00000442461 ANAPC11Q9NYG5 84 aa6.39□□□□□ -1.39
LIN54-202ENST00000442461 LY6G6CO95867 125 aa6.39□□□□□ -1.39
LIN54-202ENST00000442461 CASC10Q5T4H9 136 aa6.39□□□□□ -1.39
LIN54-202ENST00000442461 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
LIN54-202ENST00000442461 TYMSOSQ8TAI1 123 aa6.38□□□□□ -1.39
LIN54-202ENST00000442461 Q6ZR54 194 aa6.37□□□□□ -1.39
LIN54-202ENST00000442461 WDFY4Q6ZS81 3184 aa6.37□□□□□ -1.39
LIN54-202ENST00000442461 ATRQ13535 2644 aa6.37□□□□□ -1.39
LIN54-202ENST00000442461 CHD6Q8TD26 2715 aa6.35□□□□□ -1.39
LIN54-202ENST00000442461 FRYLO94915 3013 aa6.35□□□□□ -1.39
LIN54-202ENST00000442461 NBDYA0A0U1RRE5 68 aa6.35□□□□□ -1.39
LIN54-202ENST00000442461 SPRR1BP22528 89 aa6.35□□□□□ -1.39
LIN54-202ENST00000442461 UNC79Q9P2D8 2635 aa6.35□□□□□ -1.39
LIN54-202ENST00000442461 USP34Q70CQ2 3546 aa6.34□□□□□ -1.39
LIN54-202ENST00000442461 FREM2Q5SZK8 3169 aa6.34□□□□□ -1.39
LIN54-202ENST00000442461 A0A087X002 238 aa6.34□□□□□ -1.39
LIN54-202ENST00000442461 Q5W150 140 aa6.34□□□□□ -1.39
LIN54-202ENST00000442461 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
LIN54-202ENST00000442461 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
LIN54-202ENST00000442461 CELSR3Q9NYQ7 3312 aa6.32□□□□□ -1.4
LIN54-202ENST00000442461 FLNBO75369 2602 aaKnown RBP6.32□□□□□ -1.4
LIN54-202ENST00000442461 CENPEQ02224 2701 aa6.31□□□□□ -1.4
LIN54-202ENST00000442461 MGAM2Q2M2H8 2515 aa6.31□□□□□ -1.4
LIN54-202ENST00000442461 ROMO1P60602 79 aa6.3□□□□□ -1.4
LIN54-202ENST00000442461 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
LIN54-202ENST00000442461 KRTAP26-1Q6PEX3 210 aa6.29□□□□□ -1.4
LIN54-202ENST00000442461 GCN1Q92616 2671 aaKnown RBP6.29□□□□□ -1.4
LIN54-202ENST00000442461 MUC3AQ02505 3323 aa6.28□□□□□ -1.4
LIN54-202ENST00000442461 NOTCH1P46531 2555 aa6.27□□□□□ -1.41
LIN54-202ENST00000442461 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
LIN54-202ENST00000442461 NBEAQ8NFP9 2946 aa6.27□□□□□ -1.41
LIN54-202ENST00000442461 MAST4O15021 2626 aa6.26□□□□□ -1.41
LIN54-202ENST00000442461 HELZ2Q9BYK8 2649 aaKnown RBP6.26□□□□□ -1.41
LIN54-202ENST00000442461 K7EIL1 84 aa6.25□□□□□ -1.41
LIN54-202ENST00000442461 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
LIN54-202ENST00000442461 TNRC18O15417 2968 aaPredicted RBP6.23□□□□□ -1.41
LIN54-202ENST00000442461 ITPR1Q14643 2758 aa6.23□□□□□ -1.41
LIN54-202ENST00000442461 NDUFAF8A1L188 74 aa6.23□□□□□ -1.41
LIN54-202ENST00000442461 NBEAL1Q6ZS30 2694 aa6.22□□□□□ -1.41
LIN54-202ENST00000442461 FLNAP21333 2647 aaKnown RBP6.2□□□□□ -1.42
LIN54-202ENST00000442461 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
LIN54-202ENST00000442461 H1FX-AS1Q4G0G2 97 aa6.2□□□□□ -1.42
LIN54-202ENST00000442461 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
LIN54-202ENST00000442461 NBEAL2Q6ZNJ1 2754 aa6.19□□□□□ -1.42
LIN54-202ENST00000442461 FRYQ5TBA9 3013 aa6.18□□□□□ -1.42
LIN54-202ENST00000442461 MAP1AP78559 2803 aaPredicted RBP6.18□□□□□ -1.42
LIN54-202ENST00000442461 A0A087WTM6 91 aa6.17□□□□□ -1.42
LIN54-202ENST00000442461 MGAQ8IWI9 3026 aa6.17□□□□□ -1.42
LIN54-202ENST00000442461 KRTAP10-3P60369 221 aa6.16□□□□□ -1.42
LIN54-202ENST00000442461 DSPP15924 2871 aaKnown RBP6.14□□□□□ -1.43
LIN54-202ENST00000442461 HECTD1Q9ULT8 2610 aa6.14□□□□□ -1.43
LIN54-202ENST00000442461 DMDP11532 3685 aa6.13□□□□□ -1.43
LIN54-202ENST00000442461 COL6A5A8TX70 2615 aa6.13□□□□□ -1.43
LIN54-202ENST00000442461 KRTAP10-11P60412 298 aa6.13□□□□□ -1.43
LIN54-202ENST00000442461 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
LIN54-202ENST00000442461 ITPR3Q14573 2671 aa6.11□□□□□ -1.43
LIN54-202ENST00000442461 A8MUU9 505 aa6.11□□□□□ -1.43
LIN54-202ENST00000442461 PANO1I0J062 215 aa6.11□□□□□ -1.43
LIN54-202ENST00000442461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.11□□□□□ -1.43
LIN54-202ENST00000442461 KALRNO60229 2985 aa6.1□□□□□ -1.43
LIN54-202ENST00000442461 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
LIN54-202ENST00000442461 BOD1L1Q8NFC6 3051 aa6.08□□□□□ -1.44
LIN54-202ENST00000442461 STAB1Q9NY15 2570 aa6.08□□□□□ -1.44
LIN54-202ENST00000442461 BAHCC1Q9P281 2608 aa6.06□□□□□ -1.44
LIN54-202ENST00000442461 LOC400499M0QZD8 3231 aa6.06□□□□□ -1.44
LIN54-202ENST00000442461 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
LIN54-202ENST00000442461 PLAC8Q9NZF1 115 aa6.05□□□□□ -1.44
LIN54-202ENST00000442461 WDFY3Q8IZQ1 3526 aa6.05□□□□□ -1.44
LIN54-202ENST00000442461 LINC00483Q53H64 154 aa6.05□□□□□ -1.44
LIN54-202ENST00000442461 KRTAP24-1Q3LI83 254 aa6.04□□□□□ -1.44
LIN54-202ENST00000442461 KRTAP11-1Q8IUC1 163 aa6.04□□□□□ -1.44
LIN54-202ENST00000442461 ZNF292O60281 2723 aa6.03□□□□□ -1.44
LIN54-202ENST00000442461 DMXL1Q9Y485 3027 aa6.02□□□□□ -1.45
LIN54-202ENST00000442461 STAB2Q8WWQ8 2551 aa6.01□□□□□ -1.45
LIN54-202ENST00000442461 ASPMQ8IZT6 3477 aa6□□□□□ -1.45
LIN54-202ENST00000442461 LRBAP50851 2863 aa5.99□□□□□ -1.45
LIN54-202ENST00000442461 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
LIN54-202ENST00000442461 ASH1LQ9NR48 2969 aaKnown RBP5.98□□□□□ -1.45
LIN54-202ENST00000442461 KRTAP1-3Q8IUG1 177 aa5.97□□□□□ -1.45
LIN54-202ENST00000442461 COX6B2Q6YFQ2 88 aa5.97□□□□□ -1.45
LIN54-202ENST00000442461 TEP1Q99973 2627 aaKnown RBP5.97□□□□□ -1.45
LIN54-202ENST00000442461 DMXL2Q8TDJ6 3036 aa5.96□□□□□ -1.45
LIN54-202ENST00000442461 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.46
LIN54-202ENST00000442461 CFAP47Q6ZTR5 3102 aa5.96□□□□□ -1.46
LIN54-202ENST00000442461 S4R3F8 94 aa5.95□□□□□ -1.46
LIN54-202ENST00000442461 SETXQ7Z333 2677 aaKnown RBP5.94□□□□□ -1.46
LIN54-202ENST00000442461 LAMA5O15230 3695 aa5.94□□□□□ -1.46
LIN54-202ENST00000442461 KRTAP1-1Q07627 177 aa5.94□□□□□ -1.46
LIN54-202ENST00000442461 ADGRG4Q8IZF6 3080 aa5.92□□□□□ -1.46
LIN54-202ENST00000442461 KRTAP1-5Q9BYS1 174 aa5.92□□□□□ -1.46
LIN54-202ENST00000442461 TEX15Q9BXT5 2789 aa5.92□□□□□ -1.46
LIN54-202ENST00000442461 CFAP46Q8IYW2 2715 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms