RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
LIMD1-202ENST00000440097 SMIM29Q86T20 159 aa9.01□□□□□ -0.97
LIMD1-202ENST00000440097 IGLV5-37A0A075B6J1 123 aa9□□□□□ -0.97
LIMD1-202ENST00000440097 C1orf195Q5TG92 126 aa9□□□□□ -0.97
LIMD1-202ENST00000440097 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
LIMD1-202ENST00000440097 Q6ZRX8 168 aa8.99□□□□□ -0.97
LIMD1-202ENST00000440097 UBE2BP63146 152 aa8.98□□□□□ -0.97
LIMD1-202ENST00000440097 Q8N377 158 aa8.98□□□□□ -0.97
LIMD1-202ENST00000440097 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
LIMD1-202ENST00000440097 LRCOL1A6NCL2 159 aa8.97□□□□□ -0.97
LIMD1-202ENST00000440097 REG3GQ6UW15 175 aa8.96□□□□□ -0.97
LIMD1-202ENST00000440097 DHRS4-AS1Q9P1J3 65 aa8.96□□□□□ -0.97
LIMD1-202ENST00000440097 hDV103S1A0JD37 113 aa8.95□□□□□ -0.98
LIMD1-202ENST00000440097 Q9BRP9 147 aa8.95□□□□□ -0.98
LIMD1-202ENST00000440097 IGLV5-48A0A075B6I7 105 aa8.95□□□□□ -0.98
LIMD1-202ENST00000440097 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
LIMD1-202ENST00000440097 C9orf163Q8N9P6 203 aa8.94□□□□□ -0.98
LIMD1-202ENST00000440097 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
LIMD1-202ENST00000440097 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
LIMD1-202ENST00000440097 SPRR1AP35321 89 aa8.93□□□□□ -0.98
LIMD1-202ENST00000440097 LCE6AA0A183 80 aa8.93□□□□□ -0.98
LIMD1-202ENST00000440097 VPS13DQ5THJ4 4388 aa8.93□□□□□ -0.98
LIMD1-202ENST00000440097 ST20-AS1Q8NBB2 130 aa8.92□□□□□ -0.98
LIMD1-202ENST00000440097 C1orf64Q8NEQ6 169 aa8.92□□□□□ -0.98
LIMD1-202ENST00000440097 LY6G6CO95867 125 aa8.91□□□□□ -0.98
LIMD1-202ENST00000440097 PHF5AQ7RTV0 110 aaKnown RBP8.91□□□□□ -0.98
LIMD1-202ENST00000440097 V9GYY9 64 aa8.91□□□□□ -0.98
LIMD1-202ENST00000440097 PRLHP81277 87 aa8.91□□□□□ -0.98
LIMD1-202ENST00000440097 DNAH2Q9P225 4427 aa8.89□□□□□ -0.99
LIMD1-202ENST00000440097 C1orf137Q5JT78 98 aa8.89□□□□□ -0.99
LIMD1-202ENST00000440097 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
LIMD1-202ENST00000440097 A0A087WTM6 91 aa8.88□□□□□ -0.99
LIMD1-202ENST00000440097 HYDINQ4G0P3 5121 aa8.88□□□□□ -0.99
LIMD1-202ENST00000440097 DSCR10P59022 87 aa8.88□□□□□ -0.99
LIMD1-202ENST00000440097 K7EQZ3 153 aa8.87□□□□□ -0.99
LIMD1-202ENST00000440097 A0A1B0GW54 56 aa8.87□□□□□ -0.99
LIMD1-202ENST00000440097 Q1T7F1 81 aa8.87□□□□□ -0.99
LIMD1-202ENST00000440097 Q8NBF4 154 aa8.87□□□□□ -0.99
LIMD1-202ENST00000440097 TNP2Q05952 138 aa8.86□□□□□ -0.99
LIMD1-202ENST00000440097 PRR4Q16378 134 aa8.86□□□□□ -0.99
LIMD1-202ENST00000440097 PANO1I0J062 215 aa8.85□□□□□ -0.99
LIMD1-202ENST00000440097 SRRM2Q9UQ35 2752 aaKnown RBP8.85□□□□□ -0.99
LIMD1-202ENST00000440097 PSPHP1O15172 72 aa8.84□□□□□ -0.99
LIMD1-202ENST00000440097 C1orf134Q5TEV5 83 aa8.84□□□□□ -0.99
LIMD1-202ENST00000440097 PRR15Q8IV56 129 aa8.84□□□□□ -0.99
LIMD1-202ENST00000440097 Q6ZR54 194 aa8.84□□□□□ -1
LIMD1-202ENST00000440097 KRTAP11-1Q8IUC1 163 aa8.84□□□□□ -1
LIMD1-202ENST00000440097 SPRR4Q96PI1 79 aa8.83□□□□□ -1
LIMD1-202ENST00000440097 RTL8CO15255 209 aa8.82□□□□□ -1
LIMD1-202ENST00000440097 UBE2AP49459 152 aa8.82□□□□□ -1
LIMD1-202ENST00000440097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.82□□□□□ -1
LIMD1-202ENST00000440097 KRTAP21-3Q3LHN1 58 aa8.82□□□□□ -1
LIMD1-202ENST00000440097 TRAV22A0A0B4J277 110 aa8.81□□□□□ -1
LIMD1-202ENST00000440097 WWC2-AS2Q96NR7 200 aa8.8□□□□□ -1
LIMD1-202ENST00000440097 FRAS1Q86XX4 4008 aa8.8□□□□□ -1
LIMD1-202ENST00000440097 HCG22E2RYF7 251 aa8.8□□□□□ -1
LIMD1-202ENST00000440097 CYP4F30PQ9H0H9 118 aa8.79□□□□□ -1
LIMD1-202ENST00000440097 IGLV5-52A0A0A0MRZ9 124 aa8.78□□□□□ -1
LIMD1-202ENST00000440097 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
LIMD1-202ENST00000440097 HECTD4Q9Y4D8 3996 aa8.78□□□□□ -1
LIMD1-202ENST00000440097 A0A0G2JQZ4 141 aa8.77□□□□□ -1.01
LIMD1-202ENST00000440097 LINC00476Q8WZB0 136 aa8.77□□□□□ -1.01
LIMD1-202ENST00000440097 DEFB116Q30KQ4 102 aa8.77□□□□□ -1.01
LIMD1-202ENST00000440097 PMAIP1Q13794 54 aa8.76□□□□□ -1.01
LIMD1-202ENST00000440097 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
LIMD1-202ENST00000440097 WFDC13Q8IUB5 93 aa8.75□□□□□ -1.01
LIMD1-202ENST00000440097 KMT2CQ8NEZ4 4911 aaKnown RBP8.75□□□□□ -1.01
LIMD1-202ENST00000440097 A8MUN3 132 aa8.74□□□□□ -1.01
LIMD1-202ENST00000440097 NDUFB1O75438 58 aa8.73□□□□□ -1.01
LIMD1-202ENST00000440097 DNAH17Q9UFH2 4485 aa8.72□□□□□ -1.01
LIMD1-202ENST00000440097 MP68P56378 58 aa8.71□□□□□ -1.01
LIMD1-202ENST00000440097 H0Y9J4 135 aa8.71□□□□□ -1.02
LIMD1-202ENST00000440097 LINC00208Q96KT6 92 aa8.7□□□□□ -1.02
LIMD1-202ENST00000440097 DNAH6Q9C0G6 4158 aa8.7□□□□□ -1.02
LIMD1-202ENST00000440097 DNAH8Q96JB1 4490 aa8.7□□□□□ -1.02
LIMD1-202ENST00000440097 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
LIMD1-202ENST00000440097 A8MU10 97 aa8.69□□□□□ -1.02
LIMD1-202ENST00000440097 RPL37AP61513 92 aaKnown RBP8.68□□□□□ -1.02
LIMD1-202ENST00000440097 Q5VV11 94 aa8.67□□□□□ -1.02
LIMD1-202ENST00000440097 A0A087WSZ3 146 aa8.67□□□□□ -1.02
LIMD1-202ENST00000440097 SACSQ9NZJ4 4579 aa8.67□□□□□ -1.02
LIMD1-202ENST00000440097 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
LIMD1-202ENST00000440097 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.03
LIMD1-202ENST00000440097 H0Y9P7 68 aa8.64□□□□□ -1.03
LIMD1-202ENST00000440097 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
LIMD1-202ENST00000440097 KRTAP10-2P60368 255 aa8.63□□□□□ -1.03
LIMD1-202ENST00000440097 KRTAP13-1Q8IUC0 172 aa8.63□□□□□ -1.03
LIMD1-202ENST00000440097 DNAH11Q96DT5 4516 aa8.63□□□□□ -1.03
LIMD1-202ENST00000440097 IGLV9-49A0A0B4J1Y8 123 aa8.62□□□□□ -1.03
LIMD1-202ENST00000440097 Q8N9P0 234 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-202ENST00000440097 DNAH5Q8TE73 4624 aa8.62□□□□□ -1.03
LIMD1-202ENST00000440097 CHKB-CPT1BH3BT56 60 aa8.61□□□□□ -1.03
LIMD1-202ENST00000440097 SPANXA2-OT1Q8N9U9 137 aa8.61□□□□□ -1.03
LIMD1-202ENST00000440097 SPRR1BP22528 89 aa8.61□□□□□ -1.03
LIMD1-202ENST00000440097 CASC2Q6XLA1 102 aa8.61□□□□□ -1.03
LIMD1-202ENST00000440097 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
LIMD1-202ENST00000440097 PRR15LQ9BU68 103 aa8.59□□□□□ -1.03
LIMD1-202ENST00000440097 PKHD1P08F94 4074 aa8.59□□□□□ -1.03
LIMD1-202ENST00000440097 LIMD2Q9BT23 127 aa8.58□□□□□ -1.04
LIMD1-202ENST00000440097 H3BPC8 53 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms