RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 FRAS1Q86XX4 4008 aa9.25□□□□□ -0.93
CPSF7-205ENST00000439958 DNAH17Q9UFH2 4485 aa9.25□□□□□ -0.93
CPSF7-205ENST00000439958 FAM236AA0A1B0GUQ0 79 aa9.24□□□□□ -0.93
CPSF7-205ENST00000439958 FAM236BA0A1B0GV22 79 aa9.24□□□□□ -0.93
CPSF7-205ENST00000439958 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
CPSF7-205ENST00000439958 DEFB116Q30KQ4 102 aa9.22□□□□□ -0.93
CPSF7-205ENST00000439958 SMR3BP02814 79 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-205ENST00000439958 Q8N9L7 120 aa9.21□□□□□ -0.93
CPSF7-205ENST00000439958 SACSQ9NZJ4 4579 aa9.21□□□□□ -0.94
CPSF7-205ENST00000439958 A0A1W2PNM2 257 aa9.21□□□□□ -0.94
CPSF7-205ENST00000439958 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.94
CPSF7-205ENST00000439958 IGFL1Q6UW32 110 aa9.21□□□□□ -0.94
CPSF7-205ENST00000439958 ZNF861PO60384 105 aa9.2□□□□□ -0.94
CPSF7-205ENST00000439958 KMT2CQ8NEZ4 4911 aaKnown RBP9.2□□□□□ -0.94
CPSF7-205ENST00000439958 A0A087WSZ3 146 aa9.2□□□□□ -0.94
CPSF7-205ENST00000439958 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
CPSF7-205ENST00000439958 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
CPSF7-205ENST00000439958 Q6JHZ5 121 aa9.19□□□□□ -0.94
CPSF7-205ENST00000439958 H0Y9J4 135 aa9.18□□□□□ -0.94
CPSF7-205ENST00000439958 IGLV7-43P04211 117 aa9.18□□□□□ -0.94
CPSF7-205ENST00000439958 MOBPQ13875 183 aa9.18□□□□□ -0.94
CPSF7-205ENST00000439958 Q8NBF4 154 aa9.17□□□□□ -0.94
CPSF7-205ENST00000439958 PKHD1P08F94 4074 aa9.17□□□□□ -0.94
CPSF7-205ENST00000439958 SPRR4Q96PI1 79 aa9.16□□□□□ -0.94
CPSF7-205ENST00000439958 DNAH5Q8TE73 4624 aa9.16□□□□□ -0.94
CPSF7-205ENST00000439958 BPY2O14599 106 aa9.15□□□□□ -0.94
CPSF7-205ENST00000439958 KRTAP13-1Q8IUC0 172 aa9.15□□□□□ -0.94
CPSF7-205ENST00000439958 TRBV7-7A0A0K0K1E9 115 aa9.14□□□□□ -0.95
CPSF7-205ENST00000439958 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-205ENST00000439958 LINC00336Q6ZUF6 198 aa9.13□□□□□ -0.95
CPSF7-205ENST00000439958 DNAH8Q96JB1 4490 aa9.13□□□□□ -0.95
CPSF7-205ENST00000439958 FAT2Q9NYQ8 4349 aa9.11□□□□□ -0.95
CPSF7-205ENST00000439958 IMUPQ9GZP8 106 aa9.09□□□□□ -0.95
CPSF7-205ENST00000439958 Q6Q795 121 aa9.09□□□□□ -0.95
CPSF7-205ENST00000439958 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
CPSF7-205ENST00000439958 Q6ZSA8 131 aa9.08□□□□□ -0.96
CPSF7-205ENST00000439958 LRP1BQ9NZR2 4599 aa9.08□□□□□ -0.96
CPSF7-205ENST00000439958 CRYGAP11844 174 aa9.06□□□□□ -0.96
CPSF7-205ENST00000439958 SPRR1BP22528 89 aa9.05□□□□□ -0.96
CPSF7-205ENST00000439958 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
CPSF7-205ENST00000439958 PKD1P98161 4303 aa9.04□□□□□ -0.96
CPSF7-205ENST00000439958 SPINK6Q6UWN8 80 aa9.04□□□□□ -0.96
CPSF7-205ENST00000439958 CXCL6P80162 114 aa9.02□□□□□ -0.97
CPSF7-205ENST00000439958 RYR2Q92736 4967 aa9.01□□□□□ -0.97
CPSF7-205ENST00000439958 IGLV8-61A0A075B6I0 122 aa9□□□□□ -0.97
CPSF7-205ENST00000439958 K7EQZ3 153 aa8.99□□□□□ -0.97
CPSF7-205ENST00000439958 CCDC179H3BU77 68 aa8.99□□□□□ -0.97
CPSF7-205ENST00000439958 A0A087X002 238 aa8.98□□□□□ -0.97
CPSF7-205ENST00000439958 PLA2G1BP04054 148 aaKnown RBP8.98□□□□□ -0.97
CPSF7-205ENST00000439958 ATOX1O00244 68 aa8.98□□□□□ -0.97
CPSF7-205ENST00000439958 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
CPSF7-205ENST00000439958 LINC00483Q53H64 154 aa8.97□□□□□ -0.97
CPSF7-205ENST00000439958 DYNC1H1Q14204 4646 aaKnown RBP8.97□□□□□ -0.97
CPSF7-205ENST00000439958 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-205ENST00000439958 A0A1B0GVY2 172 aa8.96□□□□□ -0.98
CPSF7-205ENST00000439958 IGKV4-1P06312 121 aa8.96□□□□□ -0.98
CPSF7-205ENST00000439958 FAT1Q14517 4588 aa8.95□□□□□ -0.98
CPSF7-205ENST00000439958 VPS13BQ7Z7G8 4022 aa8.94□□□□□ -0.98
CPSF7-205ENST00000439958 DSCR10P59022 87 aa8.93□□□□□ -0.98
CPSF7-205ENST00000439958 A0A1B0GW54 56 aa8.93□□□□□ -0.98
CPSF7-205ENST00000439958 CDK2AP2O75956 126 aa8.93□□□□□ -0.98
CPSF7-205ENST00000439958 RYR3Q15413 4870 aa8.91□□□□□ -0.98
CPSF7-205ENST00000439958 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.99
CPSF7-205ENST00000439958 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
CPSF7-205ENST00000439958 TYMSOSQ8TAI1 123 aa8.89□□□□□ -0.99
CPSF7-205ENST00000439958 PRR26Q8N8Z3 221 aa8.89□□□□□ -0.99
CPSF7-205ENST00000439958 IGHV6-1A0A0B4J1U7 121 aa8.88□□□□□ -0.99
CPSF7-205ENST00000439958 NDUFB1O75438 58 aa8.88□□□□□ -0.99
CPSF7-205ENST00000439958 KRTAP13-2Q52LG2 175 aa8.87□□□□□ -0.99
CPSF7-205ENST00000439958 SERP2Q8N6R1 65 aa8.87□□□□□ -0.99
CPSF7-205ENST00000439958 C20orf197Q8N268 126 aa8.86□□□□□ -0.99
CPSF7-205ENST00000439958 COX7CP15954 63 aa8.84□□□□□ -0.99
CPSF7-205ENST00000439958 LINC00472Q9H8W2 130 aa8.84□□□□□ -0.99
CPSF7-205ENST00000439958 HCG22E2RYF7 251 aa8.84□□□□□ -0.99
CPSF7-205ENST00000439958 SSBP3-AS1Q7Z2R9 100 aa8.84□□□□□ -0.99
CPSF7-205ENST00000439958 UQCRQO14949 82 aa8.83□□□□□ -1
CPSF7-205ENST00000439958 SNURFQ9Y675 71 aa8.83□□□□□ -1
CPSF7-205ENST00000439958 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
CPSF7-205ENST00000439958 FAM229AH3BQW9 127 aa8.83□□□□□ -1
CPSF7-205ENST00000439958 NDUFS5O43920 106 aa8.83□□□□□ -1
CPSF7-205ENST00000439958 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
CPSF7-205ENST00000439958 A8MWP4 228 aa8.81□□□□□ -1
CPSF7-205ENST00000439958 CASC2Q6XLA1 102 aa8.8□□□□□ -1
CPSF7-205ENST00000439958 PRR15Q8IV56 129 aa8.8□□□□□ -1
CPSF7-205ENST00000439958 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
CPSF7-205ENST00000439958 FAM229BQ4G0N7 80 aa8.77□□□□□ -1.01
CPSF7-205ENST00000439958 J3KT08 172 aa8.77□□□□□ -1.01
CPSF7-205ENST00000439958 APOBP04114 4563 aaKnown RBP8.76□□□□□ -1.01
CPSF7-205ENST00000439958 Q5VSD8 79 aa8.76□□□□□ -1.01
CPSF7-205ENST00000439958 Q96NJ1 140 aa8.75□□□□□ -1.01
CPSF7-205ENST00000439958 CYSTM1Q9H1C7 97 aa8.74□□□□□ -1.01
CPSF7-205ENST00000439958 LINC00304Q8N9R0 145 aa8.73□□□□□ -1.01
CPSF7-205ENST00000439958 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
CPSF7-205ENST00000439958 SMIM20Q8N5G0 67 aa8.73□□□□□ -1.01
CPSF7-205ENST00000439958 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
CPSF7-205ENST00000439958 NOTCH2NLQ7Z3S9 236 aa8.72□□□□□ -1.01
CPSF7-205ENST00000439958 A0A1B0GVX0 72 aa8.71□□□□□ -1.02
CPSF7-205ENST00000439958 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
CPSF7-205ENST00000439958 CD164Q04900 197 aa8.69□□□□□ -1.02
CPSF7-205ENST00000439958 OCR1Q9BZK8 76 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms