RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ZNF815PA8K554 130 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 A8MUU9 505 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 CHKB-CPT1BH3BT56 60 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 M0QY20 66 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 RTL8CO15255 209 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 PSCAO43653 123 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 MGPP08493 103 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 SFTA2Q6UW10 78 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 C20orf166-AS1Q96NR2 134 aa3.56□□□□□ -1.84
RFC3-202ENST00000434425 TRBV30A0A0K0K1B3 111 aa3.55□□□□□ -1.84
RFC3-202ENST00000434425 H7C423 109 aa3.55□□□□□ -1.84
RFC3-202ENST00000434425 LY6G6CO95867 125 aa3.55□□□□□ -1.84
RFC3-202ENST00000434425 LINC01547P58512 204 aaPredicted RBP3.55□□□□□ -1.84
RFC3-202ENST00000434425 Q6ZR54 194 aa3.55□□□□□ -1.84
RFC3-202ENST00000434425 DNAH17Q9UFH2 4485 aa3.55□□□□□ -1.84
RFC3-202ENST00000434425 PKD1P98161 4303 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 TRAV12-3A0A0B4J271 114 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 H3BPC8 53 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 H7C2G1 150 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 INSP01308 110 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 MIR22HGQ0VDD5 57 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 MIR7-3HGQ8N6C7 128 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 AMELXQ99217 191 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 IGLV10-54A0A075B6I4 117 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 TRAV23DV6A0A075B6W5 121 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 A0A0J9YY99 117 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 TRBV7-4A0A0J9YYF1 115 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 I3L3M4 83 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 ICOSQ9Y6W8 199 aa3.54□□□□□ -1.84
RFC3-202ENST00000434425 IGKV3-7A0A075B6H7 116 aa3.53□□□□□ -1.84
RFC3-202ENST00000434425 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.53□□□□□ -1.84
RFC3-202ENST00000434425 PANO1I0J062 215 aa3.53□□□□□ -1.84
RFC3-202ENST00000434425 IGHV3-30P01768 117 aa3.53□□□□□ -1.84
RFC3-202ENST00000434425 IGHV3-30-5P0DP03 117 aa3.53□□□□□ -1.84
RFC3-202ENST00000434425 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.53□□□□□ -1.84
RFC3-202ENST00000434425 RPL39P62891 51 aaKnown RBP3.52□□□□□ -1.85
RFC3-202ENST00000434425 SPINK13Q1W4C9 94 aa3.52□□□□□ -1.85
RFC3-202ENST00000434425 KRTAP26-1Q6PEX3 210 aa3.52□□□□□ -1.85
RFC3-202ENST00000434425 SMIM29Q86T20 159 aa3.52□□□□□ -1.85
RFC3-202ENST00000434425 DYNC1H1Q14204 4646 aaKnown RBP3.51□□□□□ -1.85
RFC3-202ENST00000434425 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
RFC3-202ENST00000434425 WFDC10AQ9H1F0 79 aa3.51□□□□□ -1.85
RFC3-202ENST00000434425 IGHV3-53P01767 116 aa3.5□□□□□ -1.85
RFC3-202ENST00000434425 IGHV3-33P01772 117 aa3.5□□□□□ -1.85
RFC3-202ENST00000434425 BAALC-AS2P0C853 105 aa3.5□□□□□ -1.85
RFC3-202ENST00000434425 CFC1P0CG37 223 aa3.5□□□□□ -1.85
RFC3-202ENST00000434425 DEFB131AP59861 70 aa3.5□□□□□ -1.85
RFC3-202ENST00000434425 FAM74A4Q5TZK3 123 aa3.5□□□□□ -1.85
RFC3-202ENST00000434425 Q8N9P0 234 aaPredicted RBP3.5□□□□□ -1.85
RFC3-202ENST00000434425 HSPG2P98160 4391 aa3.49□□□□□ -1.85
RFC3-202ENST00000434425 A0A1W2PNM2 257 aa3.49□□□□□ -1.85
RFC3-202ENST00000434425 IGKV3-20P01619 116 aa3.49□□□□□ -1.85
RFC3-202ENST00000434425 DEFB114Q30KQ6 69 aa3.49□□□□□ -1.85
RFC3-202ENST00000434425 TMEM263Q8WUH6 116 aaKnown RBP3.49□□□□□ -1.85
RFC3-202ENST00000434425 DNAH11Q96DT5 4516 aa3.49□□□□□ -1.85
RFC3-202ENST00000434425 A0A087WVE0 104 aa3.48□□□□□ -1.85
RFC3-202ENST00000434425 A0A0J9YWU9 116 aa3.48□□□□□ -1.85
RFC3-202ENST00000434425 LINC00483Q53H64 154 aa3.48□□□□□ -1.85
RFC3-202ENST00000434425 Q8N377 158 aa3.48□□□□□ -1.85
RFC3-202ENST00000434425 LITAFQ99732 161 aa3.48□□□□□ -1.85
RFC3-202ENST00000434425 SNURFQ9Y675 71 aa3.48□□□□□ -1.85
RFC3-202ENST00000434425 NUPR2A6NF83 97 aa3.47□□□□□ -1.85
RFC3-202ENST00000434425 TMEM254Q8TBM7 123 aa3.47□□□□□ -1.85
RFC3-202ENST00000434425 TRAV10A0A0B4J240 114 aa3.47□□□□□ -1.85
RFC3-202ENST00000434425 TRBV10-1A0A0K0K1A3 114 aa3.47□□□□□ -1.85
RFC3-202ENST00000434425 GIG44P09565 113 aaPredicted RBP3.47□□□□□ -1.85
RFC3-202ENST00000434425 ELOF1P60002 83 aaKnown RBP3.47□□□□□ -1.85
RFC3-202ENST00000434425 CSAG1Q6PB30 78 aa3.47□□□□□ -1.85
RFC3-202ENST00000434425 MUSTN1Q8IVN3 82 aa3.47□□□□□ -1.85
RFC3-202ENST00000434425 HERC1Q15751 4861 aa3.47□□□□□ -1.85
RFC3-202ENST00000434425 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.86
RFC3-202ENST00000434425 H3BQ85 93 aa3.46□□□□□ -1.86
RFC3-202ENST00000434425 Q8NAQ8 132 aa3.46□□□□□ -1.86
RFC3-202ENST00000434425 RPL36ALQ969Q0 106 aaKnown RBP3.46□□□□□ -1.86
RFC3-202ENST00000434425 PLAC8Q9NZF1 115 aa3.46□□□□□ -1.86
RFC3-202ENST00000434425 NDUFA1O15239 70 aa3.45□□□□□ -1.86
RFC3-202ENST00000434425 DEFB104AQ8WTQ1 72 aa3.45□□□□□ -1.86
RFC3-202ENST00000434425 PRR34Q9NV39 138 aa3.45□□□□□ -1.86
RFC3-202ENST00000434425 IGKV3D-7A0A0C4DH55 119 aa3.44□□□□□ -1.86
RFC3-202ENST00000434425 DEFB135Q30KP9 77 aa3.44□□□□□ -1.86
RFC3-202ENST00000434425 C16orf74Q96GX8 76 aa3.44□□□□□ -1.86
RFC3-202ENST00000434425 OBSCN-AS1Q96MR7 158 aa3.44□□□□□ -1.86
RFC3-202ENST00000434425 LINC00167Q96N53 147 aa3.44□□□□□ -1.86
RFC3-202ENST00000434425 Q9BRP9 147 aa3.44□□□□□ -1.86
RFC3-202ENST00000434425 LRP1BQ9NZR2 4599 aa3.43□□□□□ -1.86
RFC3-202ENST00000434425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
RFC3-202ENST00000434425 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
RFC3-202ENST00000434425 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
RFC3-202ENST00000434425 CNBPP62633 177 aaKnown RBP3.43□□□□□ -1.86
RFC3-202ENST00000434425 Q1RN00 199 aa3.43□□□□□ -1.86
RFC3-202ENST00000434425 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
RFC3-202ENST00000434425 IGHV3-64A0A075B6Q5 118 aa3.42□□□□□ -1.86
RFC3-202ENST00000434425 HTN1P15515 57 aa3.42□□□□□ -1.86
RFC3-202ENST00000434425 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
RFC3-202ENST00000434425 CDKN2A-AS1Q9UH64 79 aa3.42□□□□□ -1.86
RFC3-202ENST00000434425 APLNQ9ULZ1 77 aa3.42□□□□□ -1.86
RFC3-202ENST00000434425 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
RFC3-202ENST00000434425 SRRM2Q9UQ35 2752 aaKnown RBP3.42□□□□□ -1.86
RFC3-202ENST00000434425 TRGV1A0A0A0MS02 117 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 1369.7 ms