RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 NMES1Q9C002 83 aa2.79□□□□□ -1.96
LINC00348-201ENST00000428761 PSENENQ9NZ42 101 aa2.79□□□□□ -1.96
LINC00348-201ENST00000428761 TRAV23DV6A0A075B6W5 121 aa2.78□□□□□ -1.96
LINC00348-201ENST00000428761 TRBV6-8A0A0A6YYG3 113 aa2.78□□□□□ -1.96
LINC00348-201ENST00000428761 TRAV12-3A0A0B4J271 114 aa2.78□□□□□ -1.96
LINC00348-201ENST00000428761 TMEM14DPA8MWL7 114 aa2.78□□□□□ -1.96
LINC00348-201ENST00000428761 H3BRN7 92 aa2.78□□□□□ -1.96
LINC00348-201ENST00000428761 LEPROTL1O95214 131 aa2.78□□□□□ -1.96
LINC00348-201ENST00000428761 NDUFA11Q86Y39 141 aa2.78□□□□□ -1.96
LINC00348-201ENST00000428761 ALPK2Q86TB3 2170 aa2.78□□□□□ -1.96
LINC00348-201ENST00000428761 MPDZO75970 2070 aa2.77□□□□□ -1.97
LINC00348-201ENST00000428761 LRP2P98164 4655 aa2.77□□□□□ -1.97
LINC00348-201ENST00000428761 IGLV3-32A0A0A0MS00 114 aa2.77□□□□□ -1.97
LINC00348-201ENST00000428761 SSBP1Q04837 148 aaKnown RBP2.77□□□□□ -1.97
LINC00348-201ENST00000428761 ATP5EP2Q5VTU8 51 aa2.77□□□□□ -1.97
LINC00348-201ENST00000428761 CSAG1Q6PB30 78 aa2.77□□□□□ -1.97
LINC00348-201ENST00000428761 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
LINC00348-201ENST00000428761 ANKRD36A6QL64 1941 aa2.76□□□□□ -1.97
LINC00348-201ENST00000428761 TRGV4A0A0C4DH28 118 aa2.76□□□□□ -1.97
LINC00348-201ENST00000428761 TMEM14BQ9NUH8 114 aa2.76□□□□□ -1.97
LINC00348-201ENST00000428761 C22orf24Q9Y442 160 aa2.76□□□□□ -1.97
LINC00348-201ENST00000428761 APOBP04114 4563 aaKnown RBP2.76□□□□□ -1.97
LINC00348-201ENST00000428761 VPS13DQ5THJ4 4388 aa2.75□□□□□ -1.97
LINC00348-201ENST00000428761 A0A0J9YY99 117 aa2.75□□□□□ -1.97
LINC00348-201ENST00000428761 CLPSL1A2RUU4 121 aa2.75□□□□□ -1.97
LINC00348-201ENST00000428761 IGKV1-17P01599 117 aa2.75□□□□□ -1.97
LINC00348-201ENST00000428761 CMC2Q9NRP2 79 aa2.75□□□□□ -1.97
LINC00348-201ENST00000428761 UBE2D4Q9Y2X8 147 aa2.75□□□□□ -1.97
LINC00348-201ENST00000428761 NINQ8N4C6 2090 aa2.74□□□□□ -1.97
LINC00348-201ENST00000428761 LINC01549A6NIU2 74 aa2.74□□□□□ -1.97
LINC00348-201ENST00000428761 D6R8Y8 96 aa2.74□□□□□ -1.97
LINC00348-201ENST00000428761 ARMS2P0C7Q2 107 aa2.74□□□□□ -1.97
LINC00348-201ENST00000428761 S100A3P33764 101 aa2.74□□□□□ -1.97
LINC00348-201ENST00000428761 MUSTN1Q8IVN3 82 aa2.74□□□□□ -1.97
LINC00348-201ENST00000428761 TTTY12Q9BZ98 90 aa2.74□□□□□ -1.97
LINC00348-201ENST00000428761 MRPL36Q9P0J6 103 aaKnown RBP2.74□□□□□ -1.97
LINC00348-201ENST00000428761 MED12Q93074 2177 aa2.74□□□□□ -1.97
LINC00348-201ENST00000428761 DNAH2Q9P225 4427 aa2.73□□□□□ -1.97
LINC00348-201ENST00000428761 TRBV10-1A0A0K0K1A3 114 aa2.73□□□□□ -1.97
LINC00348-201ENST00000428761 UBE2D1P51668 147 aa2.73□□□□□ -1.97
LINC00348-201ENST00000428761 PRR15LQ9BU68 103 aa2.73□□□□□ -1.97
LINC00348-201ENST00000428761 CDC42SE2Q9NRR3 84 aa2.73□□□□□ -1.97
LINC00348-201ENST00000428761 NDUFA4L2Q9NRX3 87 aa2.73□□□□□ -1.97
LINC00348-201ENST00000428761 ABRACLQ9P1F3 81 aa2.73□□□□□ -1.97
LINC00348-201ENST00000428761 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 DNAH6Q9C0G6 4158 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 TRBV6-4A0A1B0GX49 114 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 HMGN4O00479 90 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 FCER1GP30273 86 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 C10orf55Q5SWW7 151 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 DMAC1Q96GE9 116 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 SNURFQ9Y675 71 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 FAT1Q14517 4588 aa2.72□□□□□ -1.97
LINC00348-201ENST00000428761 NUPR2A6NF83 97 aa2.71□□□□□ -1.98
LINC00348-201ENST00000428761 IGHV3-30P01768 117 aa2.71□□□□□ -1.98
LINC00348-201ENST00000428761 SAA2P0DJI9 122 aaPredicted RBP2.71□□□□□ -1.98
LINC00348-201ENST00000428761 IGHV3-30-5P0DP03 117 aa2.71□□□□□ -1.98
LINC00348-201ENST00000428761 CAV3P56539 151 aa2.71□□□□□ -1.98
LINC00348-201ENST00000428761 HCP5Q6MZN7 132 aa2.71□□□□□ -1.98
LINC00348-201ENST00000428761 PKHD1L1Q86WI1 4243 aa2.7□□□□□ -1.98
LINC00348-201ENST00000428761 LOC101927531A0A1B0GV80 90 aa2.7□□□□□ -1.98
LINC00348-201ENST00000428761 PPYP01298 95 aa2.7□□□□□ -1.98
LINC00348-201ENST00000428761 RNASE3P12724 160 aaKnown RBP2.7□□□□□ -1.98
LINC00348-201ENST00000428761 GDF5OSQ5U4N7 250 aa2.7□□□□□ -1.98
LINC00348-201ENST00000428761 TXNDC17Q9BRA2 123 aa2.7□□□□□ -1.98
LINC00348-201ENST00000428761 KLK9Q9UKQ9 250 aa2.7□□□□□ -1.98
LINC00348-201ENST00000428761 ELOF1P60002 83 aaKnown RBP2.69□□□□□ -1.98
LINC00348-201ENST00000428761 LENEPQ9Y5L5 61 aa2.69□□□□□ -1.98
LINC00348-201ENST00000428761 NEBP20929 6669 aa2.69□□□□□ -1.98
LINC00348-201ENST00000428761 PKD1P98161 4303 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 IGKV3-7A0A075B6H7 116 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 A0A087WVE0 104 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 IGKV3D-7A0A0C4DH55 119 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 HIGD1CA8MV81 97 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 PPP1R17O96001 155 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 DNAL4O96015 105 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 SPAG11BQ08648 103 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
LINC00348-201ENST00000428761 LRP1BQ9NZR2 4599 aa2.67□□□□□ -1.98
LINC00348-201ENST00000428761 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
LINC00348-201ENST00000428761 LELP1Q5T871 98 aa2.67□□□□□ -1.98
LINC00348-201ENST00000428761 COA5Q86WW8 74 aa2.67□□□□□ -1.98
LINC00348-201ENST00000428761 ZNF563Q8TA94 476 aa2.67□□□□□ -1.98
LINC00348-201ENST00000428761 TRBV7-4A0A0J9YYF1 115 aa2.66□□□□□ -1.98
LINC00348-201ENST00000428761 JMJD7-PLA2G4BH0Y9G9 81 aa2.66□□□□□ -1.98
LINC00348-201ENST00000428761 PDE6GP18545 87 aa2.66□□□□□ -1.98
LINC00348-201ENST00000428761 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
LINC00348-201ENST00000428761 DNAH17Q9UFH2 4485 aa2.66□□□□□ -1.98
LINC00348-201ENST00000428761 HEATR1Q9H583 2144 aaKnown RBP2.65□□□□□ -1.98
LINC00348-201ENST00000428761 VPS13BQ7Z7G8 4022 aa2.65□□□□□ -1.98
LINC00348-201ENST00000428761 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.99
LINC00348-201ENST00000428761 TRBV6-5A0A0K0K1A5 114 aa2.65□□□□□ -1.99
LINC00348-201ENST00000428761 TRBV30A0A0K0K1B3 111 aa2.65□□□□□ -1.99
LINC00348-201ENST00000428761 M0R3E3 92 aa2.65□□□□□ -1.99
LINC00348-201ENST00000428761 IGLV3-1P01715 115 aa2.65□□□□□ -1.99
LINC00348-201ENST00000428761 DNAH5Q8TE73 4624 aa2.65□□□□□ -1.99
LINC00348-201ENST00000428761 K7EMI3 77 aa2.64□□□□□ -1.99
LINC00348-201ENST00000428761 IFI6P09912 130 aa2.64□□□□□ -1.99
LINC00348-201ENST00000428761 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
LINC00348-201ENST00000428761 FAM74A4Q5TZK3 123 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms