RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 ATRQ13535 2644 aa8.04□□□□□ -1.12
SPG11-202ENST00000427534 WDFY4Q6ZS81 3184 aa8.04□□□□□ -1.12
SPG11-202ENST00000427534 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
SPG11-202ENST00000427534 A0A1B0GU33 70 aa8.03□□□□□ -1.12
SPG11-202ENST00000427534 HELZ2Q9BYK8 2649 aaKnown RBP8.03□□□□□ -1.12
SPG11-202ENST00000427534 MGAQ8IWI9 3026 aa8.02□□□□□ -1.13
SPG11-202ENST00000427534 ZCCHC13Q8WW36 166 aaKnown RBP8.01□□□□□ -1.13
SPG11-202ENST00000427534 PLAC8Q9NZF1 115 aa8.01□□□□□ -1.13
SPG11-202ENST00000427534 LUZP6Q538Z0 58 aa8□□□□□ -1.13
SPG11-202ENST00000427534 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
SPG11-202ENST00000427534 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
SPG11-202ENST00000427534 R4GN34 69 aa7.98□□□□□ -1.13
SPG11-202ENST00000427534 CFAP46Q8IYW2 2715 aa7.98□□□□□ -1.13
SPG11-202ENST00000427534 SPINK7P58062 85 aa7.98□□□□□ -1.13
SPG11-202ENST00000427534 MAST4O15021 2626 aa7.97□□□□□ -1.13
SPG11-202ENST00000427534 LCE6AA0A183 80 aa7.96□□□□□ -1.13
SPG11-202ENST00000427534 SPRR1AP35321 89 aa7.96□□□□□ -1.13
SPG11-202ENST00000427534 VPS13AQ96RL7 3174 aa7.95□□□□□ -1.14
SPG11-202ENST00000427534 FAM229BQ4G0N7 80 aa7.95□□□□□ -1.14
SPG11-202ENST00000427534 COL6A3P12111 3177 aa7.94□□□□□ -1.14
SPG11-202ENST00000427534 PANO1I0J062 215 aa7.94□□□□□ -1.14
SPG11-202ENST00000427534 Q1T7F1 81 aa7.93□□□□□ -1.14
SPG11-202ENST00000427534 Q5W150 140 aa7.92□□□□□ -1.14
SPG11-202ENST00000427534 CENPEQ02224 2701 aa7.92□□□□□ -1.14
SPG11-202ENST00000427534 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
SPG11-202ENST00000427534 KTN1-AS1Q86SY8 53 aa7.91□□□□□ -1.14
SPG11-202ENST00000427534 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.14
SPG11-202ENST00000427534 PRAC1Q96KF2 57 aa7.9□□□□□ -1.14
SPG11-202ENST00000427534 M0QZ58 72 aa7.89□□□□□ -1.15
SPG11-202ENST00000427534 KRTAP26-1Q6PEX3 210 aa7.87□□□□□ -1.15
SPG11-202ENST00000427534 VCANP13611 3396 aa7.87□□□□□ -1.15
SPG11-202ENST00000427534 TRANK1O15050 2925 aa7.87□□□□□ -1.15
SPG11-202ENST00000427534 LCA10Q71F78 164 aa7.87□□□□□ -1.15
SPG11-202ENST00000427534 SPRR1BP22528 89 aa7.86□□□□□ -1.15
SPG11-202ENST00000427534 ZNF292O60281 2723 aa7.85□□□□□ -1.15
SPG11-202ENST00000427534 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
SPG11-202ENST00000427534 TEX15Q9BXT5 2789 aa7.83□□□□□ -1.16
SPG11-202ENST00000427534 SPATA8Q6RVD6 105 aa7.82□□□□□ -1.16
SPG11-202ENST00000427534 TEP1Q99973 2627 aaKnown RBP7.82□□□□□ -1.16
SPG11-202ENST00000427534 LINC00472Q9H8W2 130 aa7.82□□□□□ -1.16
SPG11-202ENST00000427534 CFAP47Q6ZTR5 3102 aa7.82□□□□□ -1.16
SPG11-202ENST00000427534 AKAP13Q12802 2813 aa7.81□□□□□ -1.16
SPG11-202ENST00000427534 A0A087X002 238 aa7.8□□□□□ -1.16
SPG11-202ENST00000427534 CHD6Q8TD26 2715 aa7.79□□□□□ -1.16
SPG11-202ENST00000427534 FRYQ5TBA9 3013 aa7.79□□□□□ -1.16
SPG11-202ENST00000427534 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
SPG11-202ENST00000427534 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
SPG11-202ENST00000427534 SPEGQ15772 3267 aa7.78□□□□□ -1.16
SPG11-202ENST00000427534 REV3LO60673 3130 aa7.77□□□□□ -1.17
SPG11-202ENST00000427534 DMAC1Q96GE9 116 aa7.77□□□□□ -1.17
SPG11-202ENST00000427534 Q75L30 129 aa7.74□□□□□ -1.17
SPG11-202ENST00000427534 SPTBN5Q9NRC6 3674 aaKnown RBP7.73□□□□□ -1.17
SPG11-202ENST00000427534 CRYBG3Q68DQ2 2970 aa7.73□□□□□ -1.17
SPG11-202ENST00000427534 LINC01558Q9Y6Z2 57 aa7.72□□□□□ -1.17
SPG11-202ENST00000427534 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
SPG11-202ENST00000427534 Q5XG85 94 aa7.69□□□□□ -1.18
SPG11-202ENST00000427534 LAMA1P25391 3075 aa7.68□□□□□ -1.18
SPG11-202ENST00000427534 NOTCH2NLQ7Z3S9 236 aa7.68□□□□□ -1.18
SPG11-202ENST00000427534 Q6ZR54 194 aa7.68□□□□□ -1.18
SPG11-202ENST00000427534 FP248Q71RG6 208 aaPredicted RBP7.67□□□□□ -1.18
SPG11-202ENST00000427534 USP34Q70CQ2 3546 aa7.67□□□□□ -1.18
SPG11-202ENST00000427534 KRTAP4-16G5E9R7 235 aaPredicted RBP7.67□□□□□ -1.18
SPG11-202ENST00000427534 SETXQ7Z333 2677 aaKnown RBP7.67□□□□□ -1.18
SPG11-202ENST00000427534 KRTAP11-1Q8IUC1 163 aa7.67□□□□□ -1.18
SPG11-202ENST00000427534 STAB1Q9NY15 2570 aa7.66□□□□□ -1.18
SPG11-202ENST00000427534 UNC79Q9P2D8 2635 aa7.66□□□□□ -1.18
SPG11-202ENST00000427534 FLG2Q5D862 2391 aaPredicted RBP7.66□□□□□ -1.18
SPG11-202ENST00000427534 MYO15AQ9UKN7 3530 aa7.64□□□□□ -1.19
SPG11-202ENST00000427534 GCN1Q92616 2671 aaKnown RBP7.63□□□□□ -1.19
SPG11-202ENST00000427534 COL6A5A8TX70 2615 aa7.63□□□□□ -1.19
SPG11-202ENST00000427534 OXTP01178 125 aa7.63□□□□□ -1.19
SPG11-202ENST00000427534 EYSQ5T1H1 3165 aa7.62□□□□□ -1.19
SPG11-202ENST00000427534 IGSF10Q6WRI0 2623 aa7.62□□□□□ -1.19
SPG11-202ENST00000427534 DSPP15924 2871 aaKnown RBP7.61□□□□□ -1.19
SPG11-202ENST00000427534 MAP1AP78559 2803 aaPredicted RBP7.6□□□□□ -1.19
SPG11-202ENST00000427534 Q5VV11 94 aa7.6□□□□□ -1.19
SPG11-202ENST00000427534 NBEAL1Q6ZS30 2694 aa7.59□□□□□ -1.19
SPG11-202ENST00000427534 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.19
SPG11-202ENST00000427534 BAHCC1Q9P281 2608 aa7.58□□□□□ -1.2
SPG11-202ENST00000427534 NOTCH1P46531 2555 aa7.57□□□□□ -1.2
SPG11-202ENST00000427534 ROMO1P60602 79 aa7.57□□□□□ -1.2
SPG11-202ENST00000427534 NBEAL2Q6ZNJ1 2754 aa7.56□□□□□ -1.2
SPG11-202ENST00000427534 BOD1L1Q8NFC6 3051 aa7.56□□□□□ -1.2
SPG11-202ENST00000427534 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
SPG11-202ENST00000427534 A8MU10 97 aa7.55□□□□□ -1.2
SPG11-202ENST00000427534 KALRNO60229 2985 aa7.55□□□□□ -1.2
SPG11-202ENST00000427534 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
SPG11-202ENST00000427534 C20orf166-AS1Q96NR2 134 aa7.53□□□□□ -1.2
SPG11-202ENST00000427534 DMXL2Q8TDJ6 3036 aa7.52□□□□□ -1.21
SPG11-202ENST00000427534 LRBAP50851 2863 aa7.5□□□□□ -1.21
SPG11-202ENST00000427534 A8MUU9 505 aa7.5□□□□□ -1.21
SPG11-202ENST00000427534 UBR5O95071 2799 aaPredicted RBP7.48□□□□□ -1.21
SPG11-202ENST00000427534 Q6ZRN7 208 aaPredicted RBP7.47□□□□□ -1.21
SPG11-202ENST00000427534 KRTAP7-1Q8IUC3 87 aa7.46□□□□□ -1.22
SPG11-202ENST00000427534 ASPMQ8IZT6 3477 aa7.45□□□□□ -1.22
SPG11-202ENST00000427534 H3BS24 57 aa7.44□□□□□ -1.22
SPG11-202ENST00000427534 FRYLO94915 3013 aa7.43□□□□□ -1.22
SPG11-202ENST00000427534 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
SPG11-202ENST00000427534 ATMQ13315 3056 aa7.43□□□□□ -1.22
SPG11-202ENST00000427534 TACC2O95359 2948 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms