RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 KRTAP10-1P60331 282 aa10.75□□□□□ -0.69
ARHGEF28-203ENST00000426542 PRRC2CQ9Y520 2896 aaKnown RBP10.74□□□□□ -0.69
ARHGEF28-203ENST00000426542 FLNAP21333 2647 aaKnown RBP10.72□□□□□ -0.69
ARHGEF28-203ENST00000426542 KRTAP10-2P60368 255 aa10.71□□□□□ -0.69
ARHGEF28-203ENST00000426542 ITPR3Q14573 2671 aa10.65□□□□□ -0.7
ARHGEF28-203ENST00000426542 LCE6AA0A183 80 aa10.64□□□□□ -0.71
ARHGEF28-203ENST00000426542 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
ARHGEF28-203ENST00000426542 M0QZ58 72 aa10.64□□□□□ -0.71
ARHGEF28-203ENST00000426542 ROMO1P60602 79 aa10.62□□□□□ -0.71
ARHGEF28-203ENST00000426542 H1FX-AS1Q4G0G2 97 aa10.61□□□□□ -0.71
ARHGEF28-203ENST00000426542 A0A0A0MQY5 61 aa10.59□□□□□ -0.71
ARHGEF28-203ENST00000426542 ATRQ13535 2644 aa10.56□□□□□ -0.72
ARHGEF28-203ENST00000426542 PANO1I0J062 215 aa10.56□□□□□ -0.72
ARHGEF28-203ENST00000426542 Q6ZR54 194 aa10.56□□□□□ -0.72
ARHGEF28-203ENST00000426542 ADM2Q7Z4H4 148 aa10.54□□□□□ -0.72
ARHGEF28-203ENST00000426542 H3BS24 57 aa10.52□□□□□ -0.72
ARHGEF28-203ENST00000426542 SPATA8Q6RVD6 105 aa10.51□□□□□ -0.73
ARHGEF28-203ENST00000426542 KRTAP4-16G5E9R7 235 aaPredicted RBP10.49□□□□□ -0.73
ARHGEF28-203ENST00000426542 OXTP01178 125 aa10.49□□□□□ -0.73
ARHGEF28-203ENST00000426542 C5orf42Q9H799 3197 aa10.49□□□□□ -0.73
ARHGEF28-203ENST00000426542 PLAC4Q8WY50 150 aa10.48□□□□□ -0.73
ARHGEF28-203ENST00000426542 MAST4O15021 2626 aa10.47□□□□□ -0.73
ARHGEF28-203ENST00000426542 HELZ2Q9BYK8 2649 aaKnown RBP10.47□□□□□ -0.73
ARHGEF28-203ENST00000426542 A0A087X002 238 aa10.47□□□□□ -0.73
ARHGEF28-203ENST00000426542 CEP350Q5VT06 3117 aa10.46□□□□□ -0.74
ARHGEF28-203ENST00000426542 UTRNP46939 3433 aa10.45□□□□□ -0.74
ARHGEF28-203ENST00000426542 KRTAP29-1A8MX34 341 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF28-203ENST00000426542 NOTCH2NLQ7Z3S9 236 aa10.37□□□□□ -0.75
ARHGEF28-203ENST00000426542 CFAP46Q8IYW2 2715 aa10.37□□□□□ -0.75
ARHGEF28-203ENST00000426542 CHD7Q9P2D1 2997 aa10.32□□□□□ -0.76
ARHGEF28-203ENST00000426542 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
ARHGEF28-203ENST00000426542 ASB16-AS1Q495Z4 193 aa10.23□□□□□ -0.77
ARHGEF28-203ENST00000426542 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
ARHGEF28-203ENST00000426542 STAB1Q9NY15 2570 aa10.22□□□□□ -0.77
ARHGEF28-203ENST00000426542 CHD6Q8TD26 2715 aa10.2□□□□□ -0.78
ARHGEF28-203ENST00000426542 RPS29P62273 56 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-203ENST00000426542 AKAP13Q12802 2813 aa10.19□□□□□ -0.78
ARHGEF28-203ENST00000426542 A8MU10 97 aa10.18□□□□□ -0.78
ARHGEF28-203ENST00000426542 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
ARHGEF28-203ENST00000426542 A8MUU9 505 aa10.18□□□□□ -0.78
ARHGEF28-203ENST00000426542 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
ARHGEF28-203ENST00000426542 TEX15Q9BXT5 2789 aa10.15□□□□□ -0.78
ARHGEF28-203ENST00000426542 KRTAP7-1Q8IUC3 87 aa10.14□□□□□ -0.79
ARHGEF28-203ENST00000426542 CFAP54Q96N23 3096 aa10.11□□□□□ -0.79
ARHGEF28-203ENST00000426542 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
ARHGEF28-203ENST00000426542 CENPEQ02224 2701 aa10.09□□□□□ -0.79
ARHGEF28-203ENST00000426542 KRTAP25-1Q3LHN0 102 aa10.08□□□□□ -0.8
ARHGEF28-203ENST00000426542 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF28-203ENST00000426542 CHD9Q3L8U1 2897 aa10.06□□□□□ -0.8
ARHGEF28-203ENST00000426542 C20orf166-AS1Q96NR2 134 aa10.06□□□□□ -0.8
ARHGEF28-203ENST00000426542 MGAQ8IWI9 3026 aa10.05□□□□□ -0.8
ARHGEF28-203ENST00000426542 PCNTO95613 3336 aa10.05□□□□□ -0.8
ARHGEF28-203ENST00000426542 A6NN06 94 aa10.02□□□□□ -0.81
ARHGEF28-203ENST00000426542 GCN1Q92616 2671 aaKnown RBP10.01□□□□□ -0.81
ARHGEF28-203ENST00000426542 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
ARHGEF28-203ENST00000426542 TEP1Q99973 2627 aaKnown RBP9.99□□□□□ -0.81
ARHGEF28-203ENST00000426542 UNC79Q9P2D8 2635 aa9.97□□□□□ -0.81
ARHGEF28-203ENST00000426542 A0A0C4DFX4 3053 aa9.96□□□□□ -0.81
ARHGEF28-203ENST00000426542 KRTAP16-1A8MUX0 517 aa9.95□□□□□ -0.82
ARHGEF28-203ENST00000426542 MKI67P46013 3256 aaKnown RBP9.91□□□□□ -0.82
ARHGEF28-203ENST00000426542 HTTP42858 3142 aa9.9□□□□□ -0.82
ARHGEF28-203ENST00000426542 COL6A5A8TX70 2615 aa9.89□□□□□ -0.83
ARHGEF28-203ENST00000426542 SETXQ7Z333 2677 aaKnown RBP9.89□□□□□ -0.83
ARHGEF28-203ENST00000426542 NBEAL2Q6ZNJ1 2754 aa9.85□□□□□ -0.83
ARHGEF28-203ENST00000426542 TNP1P09430 55 aa9.85□□□□□ -0.83
ARHGEF28-203ENST00000426542 RANBP2P49792 3224 aaKnown RBP9.82□□□□□ -0.84
ARHGEF28-203ENST00000426542 NOTCH1P46531 2555 aa9.81□□□□□ -0.84
ARHGEF28-203ENST00000426542 NDUFAF8A1L188 74 aa9.8□□□□□ -0.84
ARHGEF28-203ENST00000426542 TRANK1O15050 2925 aa9.78□□□□□ -0.84
ARHGEF28-203ENST00000426542 ZNF292O60281 2723 aa9.78□□□□□ -0.84
ARHGEF28-203ENST00000426542 LAMA3Q16787 3333 aa9.77□□□□□ -0.85
ARHGEF28-203ENST00000426542 WDFY4Q6ZS81 3184 aa9.76□□□□□ -0.85
ARHGEF28-203ENST00000426542 TRIOO75962 3097 aa9.76□□□□□ -0.85
ARHGEF28-203ENST00000426542 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
ARHGEF28-203ENST00000426542 STAB2Q8WWQ8 2551 aa9.74□□□□□ -0.85
ARHGEF28-203ENST00000426542 BAHCC1Q9P281 2608 aa9.71□□□□□ -0.85
ARHGEF28-203ENST00000426542 LAMA2P24043 3122 aaKnown RBP9.7□□□□□ -0.86
ARHGEF28-203ENST00000426542 IGSF10Q6WRI0 2623 aa9.65□□□□□ -0.86
ARHGEF28-203ENST00000426542 ITPR2Q14571 2701 aa9.65□□□□□ -0.87
ARHGEF28-203ENST00000426542 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
ARHGEF28-203ENST00000426542 PRUNE2Q8WUY3 3088 aa9.63□□□□□ -0.87
ARHGEF28-203ENST00000426542 DSPP15924 2871 aaKnown RBP9.62□□□□□ -0.87
ARHGEF28-203ENST00000426542 BRCA2P51587 3418 aa9.62□□□□□ -0.87
ARHGEF28-203ENST00000426542 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
ARHGEF28-203ENST00000426542 UBR5O95071 2799 aaPredicted RBP9.6□□□□□ -0.87
ARHGEF28-203ENST00000426542 KRTAP10-8P60410 259 aa9.59□□□□□ -0.87
ARHGEF28-203ENST00000426542 XP32Q5T750 250 aa9.59□□□□□ -0.87
ARHGEF28-203ENST00000426542 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
ARHGEF28-203ENST00000426542 NSD1Q96L73 2696 aaPredicted RBP9.57□□□□□ -0.88
ARHGEF28-203ENST00000426542 XIRP2A4UGR9 3374 aa9.57□□□□□ -0.88
ARHGEF28-203ENST00000426542 KRTAP1-4P0C5Y4 121 aa9.54□□□□□ -0.88
ARHGEF28-203ENST00000426542 UNC80Q8N2C7 3258 aa9.53□□□□□ -0.88
ARHGEF28-203ENST00000426542 MAP1AP78559 2803 aaPredicted RBP9.51□□□□□ -0.89
ARHGEF28-203ENST00000426542 KMT2BQ9UMN6 2715 aaPredicted RBP9.5□□□□□ -0.89
ARHGEF28-203ENST00000426542 CELSR3Q9NYQ7 3312 aa9.49□□□□□ -0.89
ARHGEF28-203ENST00000426542 FREM2Q5SZK8 3169 aa9.49□□□□□ -0.89
ARHGEF28-203ENST00000426542 PP632Q6XCG6 107 aa9.49□□□□□ -0.89
ARHGEF28-203ENST00000426542 VPS13AQ96RL7 3174 aa9.47□□□□□ -0.89
ARHGEF28-203ENST00000426542 KALRNO60229 2985 aa9.43□□□□□ -0.9
ARHGEF28-203ENST00000426542 ITPR1Q14643 2758 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms