RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 PSMB2P49721 201 aa11.85□□□□□ -0.51
HMGXB4-203ENST00000420166 A0A1B0GX51 115 aa11.83□□□□□ -0.52
HMGXB4-203ENST00000420166 PRR4Q16378 134 aa11.83□□□□□ -0.52
HMGXB4-203ENST00000420166 PPDPFLQ8WWR9 84 aa11.82□□□□□ -0.52
HMGXB4-203ENST00000420166 COX6CP09669 75 aa11.81□□□□□ -0.52
HMGXB4-203ENST00000420166 CLEC2BQ92478 149 aa11.81□□□□□ -0.52
HMGXB4-203ENST00000420166 RETNLBQ9BQ08 111 aa11.81□□□□□ -0.52
HMGXB4-203ENST00000420166 RPS29P62273 56 aaKnown RBP11.8□□□□□ -0.52
HMGXB4-203ENST00000420166 OCIAD2Q56VL3 154 aa11.8□□□□□ -0.52
HMGXB4-203ENST00000420166 F8WEM9 126 aa11.79□□□□□ -0.52
HMGXB4-203ENST00000420166 SNHG12Q9BXW3 62 aa11.75□□□□□ -0.53
HMGXB4-203ENST00000420166 CD164Q04900 197 aa11.74□□□□□ -0.53
HMGXB4-203ENST00000420166 HRCT1Q6UXD1 115 aa11.74□□□□□ -0.53
HMGXB4-203ENST00000420166 IGLV8-61A0A075B6I0 122 aa11.73□□□□□ -0.53
HMGXB4-203ENST00000420166 A0A0G2JQZ4 141 aa11.73□□□□□ -0.53
HMGXB4-203ENST00000420166 DNAL4O96015 105 aa11.72□□□□□ -0.53
HMGXB4-203ENST00000420166 SCGB1C2P0DMR2 95 aa11.72□□□□□ -0.53
HMGXB4-203ENST00000420166 GHRHP01286 108 aa11.71□□□□□ -0.53
HMGXB4-203ENST00000420166 BATFQ16520 125 aa11.71□□□□□ -0.53
HMGXB4-203ENST00000420166 LRP2P98164 4655 aa11.7□□□□□ -0.54
HMGXB4-203ENST00000420166 Q6JHZ5 121 aa11.7□□□□□ -0.54
HMGXB4-203ENST00000420166 NDUFV3P56181 108 aaKnown RBP11.68□□□□□ -0.54
HMGXB4-203ENST00000420166 FP248Q71RG6 208 aaPredicted RBP11.68□□□□□ -0.54
HMGXB4-203ENST00000420166 NAA38Q9BRA0 125 aaKnown RBP11.68□□□□□ -0.54
HMGXB4-203ENST00000420166 LIMD2Q9BT23 127 aa11.68□□□□□ -0.54
HMGXB4-203ENST00000420166 IGLV7-46A0A075B6I9 117 aa11.67□□□□□ -0.54
HMGXB4-203ENST00000420166 LST1O00453 97 aa11.67□□□□□ -0.54
HMGXB4-203ENST00000420166 TRACP01848 142 aa11.67□□□□□ -0.54
HMGXB4-203ENST00000420166 FABP2P12104 132 aa11.67□□□□□ -0.54
HMGXB4-203ENST00000420166 IGFL1Q6UW32 110 aa11.67□□□□□ -0.54
HMGXB4-203ENST00000420166 ORMDL1Q9P0S3 153 aa11.67□□□□□ -0.54
HMGXB4-203ENST00000420166 H3BUT2 72 aa11.66□□□□□ -0.54
HMGXB4-203ENST00000420166 H3BQ85 93 aa11.65□□□□□ -0.54
HMGXB4-203ENST00000420166 Q5XG85 94 aa11.62□□□□□ -0.55
HMGXB4-203ENST00000420166 UBR4Q5T4S7 5183 aa11.6□□□□□ -0.55
HMGXB4-203ENST00000420166 H3BMG7 143 aa11.6□□□□□ -0.55
HMGXB4-203ENST00000420166 TMEM256-PLSCR3K7ERE1 68 aa11.6□□□□□ -0.55
HMGXB4-203ENST00000420166 TPRXLQ17RH7 258 aa11.6□□□□□ -0.55
HMGXB4-203ENST00000420166 LPAP08519 4548 aa11.6□□□□□ -0.55
HMGXB4-203ENST00000420166 TCL1BO95988 128 aa11.58□□□□□ -0.56
HMGXB4-203ENST00000420166 ATXN8Q156A1 80 aa11.57□□□□□ -0.56
HMGXB4-203ENST00000420166 LYRM7Q5U5X0 104 aa11.57□□□□□ -0.56
HMGXB4-203ENST00000420166 TRBV7-7A0A0K0K1E9 115 aa11.56□□□□□ -0.56
HMGXB4-203ENST00000420166 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
HMGXB4-203ENST00000420166 UBE2V1Q13404 147 aa11.55□□□□□ -0.56
HMGXB4-203ENST00000420166 C9orf118A6NHY6 69 aa11.54□□□□□ -0.56
HMGXB4-203ENST00000420166 KRTAP13-3Q3SY46 172 aa11.52□□□□□ -0.57
HMGXB4-203ENST00000420166 Q6Q795 121 aa11.52□□□□□ -0.57
HMGXB4-203ENST00000420166 BAALC-AS2P0C853 105 aa11.51□□□□□ -0.57
HMGXB4-203ENST00000420166 C1orf195Q5TG92 126 aa11.51□□□□□ -0.57
HMGXB4-203ENST00000420166 TRBV20-1A0A075B6N2 111 aa11.5□□□□□ -0.57
HMGXB4-203ENST00000420166 A0A1B0GV72 72 aa11.5□□□□□ -0.57
HMGXB4-203ENST00000420166 TEN1Q86WV5 123 aa11.5□□□□□ -0.57
HMGXB4-203ENST00000420166 CDIP1Q9H305 208 aa11.5□□□□□ -0.57
HMGXB4-203ENST00000420166 ANKRD29Q8N6D5 301 aa11.49□□□□□ -0.57
HMGXB4-203ENST00000420166 ASB16-AS1Q495Z4 193 aa11.48□□□□□ -0.57
HMGXB4-203ENST00000420166 A0A1W2PPM0 123 aa11.47□□□□□ -0.57
HMGXB4-203ENST00000420166 A0A1W2PNM2 257 aa11.46□□□□□ -0.57
HMGXB4-203ENST00000420166 COL5A1-AS1Q5SY13 56 aa11.44□□□□□ -0.58
HMGXB4-203ENST00000420166 PCP4L1A6NKN8 68 aa11.43□□□□□ -0.58
HMGXB4-203ENST00000420166 C9JAW5 83 aa11.42□□□□□ -0.58
HMGXB4-203ENST00000420166 SS18L2Q9UHA2 77 aa11.42□□□□□ -0.58
HMGXB4-203ENST00000420166 A0A087WSZ3 146 aa11.41□□□□□ -0.58
HMGXB4-203ENST00000420166 TRBV7-4A0A0J9YYF1 115 aa11.41□□□□□ -0.58
HMGXB4-203ENST00000420166 RBM3P98179 157 aaKnown RBP11.41□□□□□ -0.58
HMGXB4-203ENST00000420166 CCKP06307 115 aa11.38□□□□□ -0.59
HMGXB4-203ENST00000420166 DSCR8Q96T75 97 aa11.38□□□□□ -0.59
HMGXB4-203ENST00000420166 RNF213Q63HN8 5207 aa11.36□□□□□ -0.59
HMGXB4-203ENST00000420166 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
HMGXB4-203ENST00000420166 JMJD7-PLA2G4BH0Y9G9 81 aa11.34□□□□□ -0.59
HMGXB4-203ENST00000420166 C9orf92A6NGG3 77 aa11.33□□□□□ -0.6
HMGXB4-203ENST00000420166 H3BT86 120 aa11.32□□□□□ -0.6
HMGXB4-203ENST00000420166 XP32Q5T750 250 aa11.32□□□□□ -0.6
HMGXB4-203ENST00000420166 VPS25Q9BRG1 176 aa11.32□□□□□ -0.6
HMGXB4-203ENST00000420166 MTURNQ8N3F0 131 aa11.31□□□□□ -0.6
HMGXB4-203ENST00000420166 OBSCN-AS1Q96MR7 158 aa11.29□□□□□ -0.6
HMGXB4-203ENST00000420166 Q96NJ1 140 aa11.29□□□□□ -0.6
HMGXB4-203ENST00000420166 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
HMGXB4-203ENST00000420166 Q6ZQT0 140 aa11.27□□□□□ -0.61
HMGXB4-203ENST00000420166 C14orf132Q9NPU4 83 aa11.26□□□□□ -0.61
HMGXB4-203ENST00000420166 PDE6GP18545 87 aa11.25□□□□□ -0.61
HMGXB4-203ENST00000420166 K7EP34 96 aa11.23□□□□□ -0.61
HMGXB4-203ENST00000420166 SEC61BP60468 96 aaKnown RBP11.22□□□□□ -0.61
HMGXB4-203ENST00000420166 C21orf62-AS1Q17RA5 79 aa11.22□□□□□ -0.61
HMGXB4-203ENST00000420166 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
HMGXB4-203ENST00000420166 LINC00472Q9H8W2 130 aa11.2□□□□□ -0.62
HMGXB4-203ENST00000420166 A0A1B0GW54 56 aa11.18□□□□□ -0.62
HMGXB4-203ENST00000420166 IGKV4-1P06312 121 aa11.18□□□□□ -0.62
HMGXB4-203ENST00000420166 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
HMGXB4-203ENST00000420166 PRO0461Q9UI25 63 aa11.17□□□□□ -0.62
HMGXB4-203ENST00000420166 MUC17Q685J3 4493 aa11.17□□□□□ -0.62
HMGXB4-203ENST00000420166 DEFB116Q30KQ4 102 aa11.15□□□□□ -0.62
HMGXB4-203ENST00000420166 GTF2H5Q6ZYL4 71 aa11.14□□□□□ -0.63
HMGXB4-203ENST00000420166 RPL37P61927 97 aaKnown RBP11.11□□□□□ -0.63
HMGXB4-203ENST00000420166 PCOTHQ58A44 107 aa11.09□□□□□ -0.63
HMGXB4-203ENST00000420166 MUC2Q02817 5179 aa11.08□□□□□ -0.64
HMGXB4-203ENST00000420166 J3KT08 172 aa11.07□□□□□ -0.64
HMGXB4-203ENST00000420166 DSCR10P59022 87 aa11.07□□□□□ -0.64
HMGXB4-203ENST00000420166 KRTAP4-1Q9BYQ7 146 aa11.06□□□□□ -0.64
HMGXB4-203ENST00000420166 Q75L30 129 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms