RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PSMB2P49721 201 aa13.28□□□□□ -0.28
SMARCB1-205ENST00000417137 COX6CP09669 75 aa13.27□□□□□ -0.29
SMARCB1-205ENST00000417137 A0A1B0GX51 115 aa13.26□□□□□ -0.29
SMARCB1-205ENST00000417137 TRIAP1O43715 76 aa13.26□□□□□ -0.29
SMARCB1-205ENST00000417137 RPS29P62273 56 aaKnown RBP13.26□□□□□ -0.29
SMARCB1-205ENST00000417137 OCIAD2Q56VL3 154 aa13.26□□□□□ -0.29
SMARCB1-205ENST00000417137 PPDPFLQ8WWR9 84 aa13.26□□□□□ -0.29
SMARCB1-205ENST00000417137 F8WEM9 126 aa13.25□□□□□ -0.29
SMARCB1-205ENST00000417137 RNF213Q63HN8 5207 aa13.24□□□□□ -0.29
SMARCB1-205ENST00000417137 GHRHP01286 108 aa13.22□□□□□ -0.29
SMARCB1-205ENST00000417137 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
SMARCB1-205ENST00000417137 RETNLBQ9BQ08 111 aa13.21□□□□□ -0.29
SMARCB1-205ENST00000417137 SNHG12Q9BXW3 62 aa13.21□□□□□ -0.29
SMARCB1-205ENST00000417137 LRP2P98164 4655 aa13.21□□□□□ -0.3
SMARCB1-205ENST00000417137 CD164Q04900 197 aa13.18□□□□□ -0.3
SMARCB1-205ENST00000417137 HRCT1Q6UXD1 115 aa13.16□□□□□ -0.3
SMARCB1-205ENST00000417137 CLEC2BQ92478 149 aa13.16□□□□□ -0.3
SMARCB1-205ENST00000417137 DNAL4O96015 105 aa13.15□□□□□ -0.3
SMARCB1-205ENST00000417137 SCGB1C2P0DMR2 95 aa13.15□□□□□ -0.3
SMARCB1-205ENST00000417137 Q6JHZ5 121 aa13.14□□□□□ -0.31
SMARCB1-205ENST00000417137 FP248Q71RG6 208 aaPredicted RBP13.14□□□□□ -0.31
SMARCB1-205ENST00000417137 LIMD2Q9BT23 127 aa13.14□□□□□ -0.31
SMARCB1-205ENST00000417137 IGLV8-61A0A075B6I0 122 aa13.12□□□□□ -0.31
SMARCB1-205ENST00000417137 IGLV7-46A0A075B6I9 117 aa13.12□□□□□ -0.31
SMARCB1-205ENST00000417137 H3BQ85 93 aa13.11□□□□□ -0.31
SMARCB1-205ENST00000417137 FABP2P12104 132 aa13.09□□□□□ -0.31
SMARCB1-205ENST00000417137 ORMDL1Q9P0S3 153 aa13.08□□□□□ -0.32
SMARCB1-205ENST00000417137 NDUFV3P56181 108 aaKnown RBP13.07□□□□□ -0.32
SMARCB1-205ENST00000417137 A0A0G2JQZ4 141 aa13.06□□□□□ -0.32
SMARCB1-205ENST00000417137 BATFQ16520 125 aa13.06□□□□□ -0.32
SMARCB1-205ENST00000417137 TRACP01848 142 aa13.04□□□□□ -0.32
SMARCB1-205ENST00000417137 TMEM256-PLSCR3K7ERE1 68 aa13.03□□□□□ -0.32
SMARCB1-205ENST00000417137 Q5XG85 94 aa13.03□□□□□ -0.32
SMARCB1-205ENST00000417137 IGFL1Q6UW32 110 aa13.03□□□□□ -0.32
SMARCB1-205ENST00000417137 LST1O00453 97 aa13.02□□□□□ -0.33
SMARCB1-205ENST00000417137 TPRXLQ17RH7 258 aa13.02□□□□□ -0.33
SMARCB1-205ENST00000417137 H3BUT2 72 aa13.01□□□□□ -0.33
SMARCB1-205ENST00000417137 H3BMG7 143 aa13□□□□□ -0.33
SMARCB1-205ENST00000417137 TCL1BO95988 128 aa12.99□□□□□ -0.33
SMARCB1-205ENST00000417137 LYRM7Q5U5X0 104 aa12.97□□□□□ -0.33
SMARCB1-205ENST00000417137 NAA38Q9BRA0 125 aaKnown RBP12.97□□□□□ -0.33
SMARCB1-205ENST00000417137 CDIP1Q9H305 208 aa12.97□□□□□ -0.33
SMARCB1-205ENST00000417137 TRBV7-7A0A0K0K1E9 115 aa12.95□□□□□ -0.34
SMARCB1-205ENST00000417137 ATXN8Q156A1 80 aa12.95□□□□□ -0.34
SMARCB1-205ENST00000417137 LPAP08519 4548 aa12.93□□□□□ -0.34
SMARCB1-205ENST00000417137 UBE2V1Q13404 147 aa12.93□□□□□ -0.34
SMARCB1-205ENST00000417137 KRTAP13-3Q3SY46 172 aa12.9□□□□□ -0.34
SMARCB1-205ENST00000417137 Q6Q795 121 aa12.9□□□□□ -0.34
SMARCB1-205ENST00000417137 TEN1Q86WV5 123 aa12.9□□□□□ -0.34
SMARCB1-205ENST00000417137 BAALC-AS2P0C853 105 aa12.89□□□□□ -0.35
SMARCB1-205ENST00000417137 C1orf195Q5TG92 126 aa12.89□□□□□ -0.35
SMARCB1-205ENST00000417137 TRBV20-1A0A075B6N2 111 aa12.88□□□□□ -0.35
SMARCB1-205ENST00000417137 ANKRD29Q8N6D5 301 aa12.88□□□□□ -0.35
SMARCB1-205ENST00000417137 C9orf118A6NHY6 69 aa12.87□□□□□ -0.35
SMARCB1-205ENST00000417137 ASB16-AS1Q495Z4 193 aa12.87□□□□□ -0.35
SMARCB1-205ENST00000417137 TAX1BP3O14907 124 aa12.84□□□□□ -0.35
SMARCB1-205ENST00000417137 SS18L2Q9UHA2 77 aa12.84□□□□□ -0.35
SMARCB1-205ENST00000417137 A0A1B0GV72 72 aa12.83□□□□□ -0.36
SMARCB1-205ENST00000417137 RBM3P98179 157 aaKnown RBP12.81□□□□□ -0.36
SMARCB1-205ENST00000417137 A0A1W2PPM0 123 aa12.79□□□□□ -0.36
SMARCB1-205ENST00000417137 A0A1W2PNM2 257 aa12.78□□□□□ -0.36
SMARCB1-205ENST00000417137 DSCR8Q96T75 97 aa12.78□□□□□ -0.36
SMARCB1-205ENST00000417137 A0A087WSZ3 146 aa12.77□□□□□ -0.37
SMARCB1-205ENST00000417137 TRBV7-4A0A0J9YYF1 115 aa12.77□□□□□ -0.37
SMARCB1-205ENST00000417137 COL5A1-AS1Q5SY13 56 aa12.77□□□□□ -0.37
SMARCB1-205ENST00000417137 C9JAW5 83 aa12.74□□□□□ -0.37
SMARCB1-205ENST00000417137 CCKP06307 115 aa12.74□□□□□ -0.37
SMARCB1-205ENST00000417137 JMJD7-PLA2G4BH0Y9G9 81 aa12.73□□□□□ -0.37
SMARCB1-205ENST00000417137 PCP4L1A6NKN8 68 aa12.71□□□□□ -0.37
SMARCB1-205ENST00000417137 C9orf92A6NGG3 77 aa12.7□□□□□ -0.38
SMARCB1-205ENST00000417137 XP32Q5T750 250 aa12.68□□□□□ -0.38
SMARCB1-205ENST00000417137 VPS25Q9BRG1 176 aa12.67□□□□□ -0.38
SMARCB1-205ENST00000417137 SEC61BP60468 96 aaKnown RBP12.65□□□□□ -0.38
SMARCB1-205ENST00000417137 C21orf62-AS1Q17RA5 79 aa12.65□□□□□ -0.38
SMARCB1-205ENST00000417137 SPCS1Q9Y6A9 102 aa12.65□□□□□ -0.38
SMARCB1-205ENST00000417137 H3BT86 120 aa12.64□□□□□ -0.39
SMARCB1-205ENST00000417137 PDE6GP18545 87 aa12.64□□□□□ -0.39
SMARCB1-205ENST00000417137 LOC110117498A0A087WWA1 95 aa12.6□□□□□ -0.39
SMARCB1-205ENST00000417137 A0A0U1RQV1 116 aa12.6□□□□□ -0.39
SMARCB1-205ENST00000417137 Q96NJ1 140 aa12.59□□□□□ -0.39
SMARCB1-205ENST00000417137 Q6ZQT0 140 aa12.58□□□□□ -0.4
SMARCB1-205ENST00000417137 OBSCN-AS1Q96MR7 158 aa12.58□□□□□ -0.4
SMARCB1-205ENST00000417137 MUC2Q02817 5179 aa12.57□□□□□ -0.4
SMARCB1-205ENST00000417137 A0A1B0GW54 56 aa12.56□□□□□ -0.4
SMARCB1-205ENST00000417137 C14orf132Q9NPU4 83 aa12.56□□□□□ -0.4
SMARCB1-205ENST00000417137 MTURNQ8N3F0 131 aa12.55□□□□□ -0.4
SMARCB1-205ENST00000417137 IGKV4-1P06312 121 aa12.53□□□□□ -0.4
SMARCB1-205ENST00000417137 SIGMAR1Q99720 223 aa12.53□□□□□ -0.4
SMARCB1-205ENST00000417137 LINC00472Q9H8W2 130 aa12.52□□□□□ -0.41
SMARCB1-205ENST00000417137 K7EP34 96 aa12.5□□□□□ -0.41
SMARCB1-205ENST00000417137 MUC17Q685J3 4493 aa12.5□□□□□ -0.41
SMARCB1-205ENST00000417137 KRTAP9-2Q9BYQ4 174 aa12.49□□□□□ -0.41
SMARCB1-205ENST00000417137 DEFB116Q30KQ4 102 aa12.47□□□□□ -0.41
SMARCB1-205ENST00000417137 GTF2H5Q6ZYL4 71 aa12.47□□□□□ -0.41
SMARCB1-205ENST00000417137 RPL37P61927 97 aaKnown RBP12.46□□□□□ -0.41
SMARCB1-205ENST00000417137 J3KT08 172 aa12.44□□□□□ -0.42
SMARCB1-205ENST00000417137 PCOTHQ58A44 107 aa12.44□□□□□ -0.42
SMARCB1-205ENST00000417137 SMCPP49901 116 aaPredicted RBP12.41□□□□□ -0.42
SMARCB1-205ENST00000417137 LINC00313P59037 77 aa12.4□□□□□ -0.42
SMARCB1-205ENST00000417137 Q75L30 129 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms