RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 ANKRD11Q6UB99 2663 aaPredicted RBP-0.39□□□□□ -2.47
CBX3P9-201ENST00000402326 H0YGG7 62 aa-0.39□□□□□ -2.47
CBX3P9-201ENST00000402326 COX6B2Q6YFQ2 88 aa-0.39□□□□□ -2.47
CBX3P9-201ENST00000402326 MGAM2Q2M2H8 2515 aa-0.39□□□□□ -2.47
CBX3P9-201ENST00000402326 REV3LO60673 3130 aa-0.4□□□□□ -2.47
CBX3P9-201ENST00000402326 NWD1Q149M9 1564 aa-0.4□□□□□ -2.47
CBX3P9-201ENST00000402326 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.4□□□□□ -2.47
CBX3P9-201ENST00000402326 TNRC18O15417 2968 aaPredicted RBP-0.4□□□□□ -2.47
CBX3P9-201ENST00000402326 ITPR1Q14643 2758 aa-0.4□□□□□ -2.47
CBX3P9-201ENST00000402326 NESP48681 1621 aa-0.4□□□□□ -2.47
CBX3P9-201ENST00000402326 SCN11AQ9UI33 1791 aa-0.41□□□□□ -2.47
CBX3P9-201ENST00000402326 ACYP1P07311 99 aa-0.41□□□□□ -2.48
CBX3P9-201ENST00000402326 PIK3C2BO00750 1634 aa-0.42□□□□□ -2.48
CBX3P9-201ENST00000402326 URB2Q14146 1524 aaKnown RBP-0.42□□□□□ -2.48
CBX3P9-201ENST00000402326 NDUFB1O75438 58 aa-0.42□□□□□ -2.48
CBX3P9-201ENST00000402326 SPRR2EP22531 72 aa-0.42□□□□□ -2.48
CBX3P9-201ENST00000402326 GNG2P59768 71 aa-0.42□□□□□ -2.48
CBX3P9-201ENST00000402326 UACAQ9BZF9 1416 aa-0.42□□□□□ -2.48
CBX3P9-201ENST00000402326 LYSTQ99698 3801 aa-0.43□□□□□ -2.48
CBX3P9-201ENST00000402326 SMARCA2P51531 1590 aa-0.43□□□□□ -2.48
CBX3P9-201ENST00000402326 MAGI3Q5TCQ9 1506 aa-0.43□□□□□ -2.48
CBX3P9-201ENST00000402326 NBASA2RRP1 2371 aa-0.43□□□□□ -2.48
CBX3P9-201ENST00000402326 TEX15Q9BXT5 2789 aa-0.44□□□□□ -2.48
CBX3P9-201ENST00000402326 ARFGEF2Q9Y6D5 1785 aa-0.44□□□□□ -2.48
CBX3P9-201ENST00000402326 DMXL2Q8TDJ6 3036 aa-0.44□□□□□ -2.48
CBX3P9-201ENST00000402326 PLECQ15149 4684 aaKnown RBP-0.44□□□□□ -2.48
CBX3P9-201ENST00000402326 MTORP42345 2549 aa-0.44□□□□□ -2.48
CBX3P9-201ENST00000402326 KANTRA0A1W2PQU2 76 aa-0.44□□□□□ -2.48
CBX3P9-201ENST00000402326 PRO3102Q9H379 93 aa-0.44□□□□□ -2.48
CBX3P9-201ENST00000402326 DNAH3Q8TD57 4116 aa-0.44□□□□□ -2.48
CBX3P9-201ENST00000402326 PKD1P98161 4303 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 DNAH6Q9C0G6 4158 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 LAMA1P25391 3075 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 PDE4DIPQ5VU43 2346 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 UMAD1C9J7I0 102 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 IFI6P09912 130 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 LINC00158P58513 81 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 DEFA5Q01523 94 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 PLXNC1O60486 1568 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 DIP2BQ9P265 1576 aa-0.45□□□□□ -2.48
CBX3P9-201ENST00000402326 DNAH2Q9P225 4427 aa-0.46□□□□□ -2.48
CBX3P9-201ENST00000402326 C3orf79P0CE67 100 aa-0.46□□□□□ -2.48
CBX3P9-201ENST00000402326 NBEAQ8NFP9 2946 aa-0.46□□□□□ -2.48
CBX3P9-201ENST00000402326 CFAP46Q8IYW2 2715 aa-0.46□□□□□ -2.48
CBX3P9-201ENST00000402326 TRANK1O15050 2925 aa-0.47□□□□□ -2.48
CBX3P9-201ENST00000402326 TACC2O95359 2948 aa-0.47□□□□□ -2.48
CBX3P9-201ENST00000402326 PKHD1L1Q86WI1 4243 aa-0.47□□□□□ -2.48
CBX3P9-201ENST00000402326 RB1CC1Q8TDY2 1594 aa-0.47□□□□□ -2.48
CBX3P9-201ENST00000402326 IFI27P40305 119 aaPredicted RBP-0.47□□□□□ -2.48
CBX3P9-201ENST00000402326 ST20Q9HBF5 79 aa-0.47□□□□□ -2.48
CBX3P9-201ENST00000402326 DNAH7Q8WXX0 4024 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 CEP295Q9C0D2 2601 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 SRCAPQ6ZRS2 3230 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 SPG11Q96JI7 2443 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 WIZO95785 1651 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 PLCH1Q4KWH8 1693 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 H0YAA0 97 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 NDUFA4O00483 81 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 ADIRFQ15847 76 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 NREPQ16612 68 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 MED14O60244 1454 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 ACACBO00763 2458 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 PKD1L2Q7Z442 2459 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 ZZEF1O43149 2961 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 LRRK2Q5S007 2527 aa-0.48□□□□□ -2.49
CBX3P9-201ENST00000402326 MUC17Q685J3 4493 aa-0.49□□□□□ -2.49
CBX3P9-201ENST00000402326 A0A087WXM4 84 aa-0.49□□□□□ -2.49
CBX3P9-201ENST00000402326 LCE6AA0A183 80 aa-0.49□□□□□ -2.49
CBX3P9-201ENST00000402326 H3BNG1 76 aa-0.49□□□□□ -2.49
CBX3P9-201ENST00000402326 CUBNO60494 3623 aa-0.49□□□□□ -2.49
CBX3P9-201ENST00000402326 DDX60LQ5H9U9 1706 aaKnown RBP-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 A0A0C4DFX4 3053 aa-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 BOD1L1Q8NFC6 3051 aa-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 ANK3Q12955 4377 aaKnown RBP-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 H3BUT2 72 aa-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 ATP5EP2Q5VTU8 51 aa-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 CHD7Q9P2D1 2997 aa-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 CFAP43Q8NDM7 1665 aa-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 RICTORQ6R327 1708 aa-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 MYO9AB2RTY4 2548 aa-0.5□□□□□ -2.49
CBX3P9-201ENST00000402326 HTTP42858 3142 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 CCDC88BA6NC98 1476 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 DEPDC5O75140 1603 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 SMIM13P0DJ93 91 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 DEFB121Q5J5C9 76 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 S100A13Q99584 98 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 DCAF1Q9Y4B6 1507 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 LAMA3Q16787 3333 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 EYSQ5T1H1 3165 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 BPTFQ12830 3046 aa-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 UTP20O75691 2785 aaKnown RBP-0.51□□□□□ -2.49
CBX3P9-201ENST00000402326 MYO15AQ9UKN7 3530 aa-0.52□□□□□ -2.49
CBX3P9-201ENST00000402326 DNAH9Q9NYC9 4486 aa-0.52□□□□□ -2.49
CBX3P9-201ENST00000402326 ERVK-7P63135 1459 aa-0.52□□□□□ -2.49
CBX3P9-201ENST00000402326 CCDC18Q5T9S5 1454 aa-0.52□□□□□ -2.49
CBX3P9-201ENST00000402326 KRTAP19-6Q3LI70 58 aa-0.52□□□□□ -2.49
CBX3P9-201ENST00000402326 FAM186AA6NE01 2351 aa-0.52□□□□□ -2.49
CBX3P9-201ENST00000402326 DYNC1H1Q14204 4646 aaKnown RBP-0.52□□□□□ -2.49
CBX3P9-201ENST00000402326 DNAH1Q9P2D7 4330 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms