RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 LINC01558Q9Y6Z2 57 aa11.32□□□□□ -0.6
USP25-204ENST00000400183 Q5VV11 94 aa11.32□□□□□ -0.6
USP25-204ENST00000400183 CSAG1Q6PB30 78 aa11.31□□□□□ -0.6
USP25-204ENST00000400183 M0R2T5 61 aa11.3□□□□□ -0.6
USP25-204ENST00000400183 TEP1Q99973 2627 aaKnown RBP11.3□□□□□ -0.6
USP25-204ENST00000400183 C5orf42Q9H799 3197 aa11.29□□□□□ -0.6
USP25-204ENST00000400183 LINC00472Q9H8W2 130 aa11.29□□□□□ -0.6
USP25-204ENST00000400183 CHD6Q8TD26 2715 aa11.28□□□□□ -0.6
USP25-204ENST00000400183 PRAC1Q96KF2 57 aa11.28□□□□□ -0.6
USP25-204ENST00000400183 NBEAL1Q6ZS30 2694 aa11.27□□□□□ -0.61
USP25-204ENST00000400183 SETXQ7Z333 2677 aaKnown RBP11.26□□□□□ -0.61
USP25-204ENST00000400183 Q5W150 140 aa11.26□□□□□ -0.61
USP25-204ENST00000400183 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
USP25-204ENST00000400183 TEX15Q9BXT5 2789 aa11.24□□□□□ -0.61
USP25-204ENST00000400183 S4R3F8 94 aa11.23□□□□□ -0.61
USP25-204ENST00000400183 LINC00483Q53H64 154 aa11.23□□□□□ -0.61
USP25-204ENST00000400183 CHD7Q9P2D1 2997 aa11.23□□□□□ -0.61
USP25-204ENST00000400183 KRTAP1-5Q9BYS1 174 aa11.21□□□□□ -0.62
USP25-204ENST00000400183 SPINK7P58062 85 aa11.2□□□□□ -0.62
USP25-204ENST00000400183 H3BS24 57 aa11.17□□□□□ -0.62
USP25-204ENST00000400183 KRTAP26-1Q6PEX3 210 aa11.16□□□□□ -0.62
USP25-204ENST00000400183 CFAP54Q96N23 3096 aa11.16□□□□□ -0.62
USP25-204ENST00000400183 COL6A5A8TX70 2615 aa11.14□□□□□ -0.63
USP25-204ENST00000400183 NOTCH1P46531 2555 aa11.14□□□□□ -0.63
USP25-204ENST00000400183 UNC79Q9P2D8 2635 aa11.11□□□□□ -0.63
USP25-204ENST00000400183 SEC61BP60468 96 aaKnown RBP11.1□□□□□ -0.63
USP25-204ENST00000400183 R4GN34 69 aa11.1□□□□□ -0.63
USP25-204ENST00000400183 KRTAP10-1P60331 282 aa11.05□□□□□ -0.64
USP25-204ENST00000400183 Q5VSD8 79 aa11.05□□□□□ -0.64
USP25-204ENST00000400183 GCN1Q92616 2671 aaKnown RBP11.03□□□□□ -0.64
USP25-204ENST00000400183 LCE6AA0A183 80 aa11.01□□□□□ -0.65
USP25-204ENST00000400183 KRTAP10-2P60368 255 aa11.01□□□□□ -0.65
USP25-204ENST00000400183 DMBT1Q9UGM3 2413 aaPredicted RBP11□□□□□ -0.65
USP25-204ENST00000400183 CHD9Q3L8U1 2897 aa10.96□□□□□ -0.65
USP25-204ENST00000400183 RPL37P61927 97 aaKnown RBP10.96□□□□□ -0.66
USP25-204ENST00000400183 KRTAP4-16G5E9R7 235 aaPredicted RBP10.94□□□□□ -0.66
USP25-204ENST00000400183 ZNF292O60281 2723 aa10.93□□□□□ -0.66
USP25-204ENST00000400183 STAB2Q8WWQ8 2551 aa10.93□□□□□ -0.66
USP25-204ENST00000400183 MGAQ8IWI9 3026 aa10.93□□□□□ -0.66
USP25-204ENST00000400183 LAMA2P24043 3122 aaKnown RBP10.9□□□□□ -0.66
USP25-204ENST00000400183 Q6ZR54 194 aa10.9□□□□□ -0.67
USP25-204ENST00000400183 PANO1I0J062 215 aa10.89□□□□□ -0.67
USP25-204ENST00000400183 M0QZ58 72 aa10.86□□□□□ -0.67
USP25-204ENST00000400183 HTTP42858 3142 aa10.86□□□□□ -0.67
USP25-204ENST00000400183 H1FX-AS1Q4G0G2 97 aa10.86□□□□□ -0.67
USP25-204ENST00000400183 KRTAP29-1A8MX34 341 aaPredicted RBP10.85□□□□□ -0.67
USP25-204ENST00000400183 ROMO1P60602 79 aa10.85□□□□□ -0.67
USP25-204ENST00000400183 UBR5O95071 2799 aaPredicted RBP10.81□□□□□ -0.68
USP25-204ENST00000400183 A0A0A0MQY5 61 aa10.81□□□□□ -0.68
USP25-204ENST00000400183 RANBP2P49792 3224 aaKnown RBP10.81□□□□□ -0.68
USP25-204ENST00000400183 MKI67P46013 3256 aaKnown RBP10.8□□□□□ -0.68
USP25-204ENST00000400183 A0A087X002 238 aa10.79□□□□□ -0.68
USP25-204ENST00000400183 NBEAL2Q6ZNJ1 2754 aa10.79□□□□□ -0.68
USP25-204ENST00000400183 ADM2Q7Z4H4 148 aa10.72□□□□□ -0.69
USP25-204ENST00000400183 MAP1AP78559 2803 aaPredicted RBP10.71□□□□□ -0.69
USP25-204ENST00000400183 ASB16-AS1Q495Z4 193 aa10.71□□□□□ -0.69
USP25-204ENST00000400183 BRCA2P51587 3418 aa10.7□□□□□ -0.7
USP25-204ENST00000400183 BAHCC1Q9P281 2608 aa10.69□□□□□ -0.7
USP25-204ENST00000400183 A6NN06 94 aa10.69□□□□□ -0.7
USP25-204ENST00000400183 SPATA8Q6RVD6 105 aa10.69□□□□□ -0.7
USP25-204ENST00000400183 NSD1Q96L73 2696 aaPredicted RBP10.68□□□□□ -0.7
USP25-204ENST00000400183 TRANK1O15050 2925 aa10.68□□□□□ -0.7
USP25-204ENST00000400183 LAMA3Q16787 3333 aa10.67□□□□□ -0.7
USP25-204ENST00000400183 IGSF10Q6WRI0 2623 aa10.67□□□□□ -0.7
USP25-204ENST00000400183 TRIOO75962 3097 aa10.67□□□□□ -0.7
USP25-204ENST00000400183 NOTCH2NLQ7Z3S9 236 aa10.67□□□□□ -0.7
USP25-204ENST00000400183 PLAC4Q8WY50 150 aa10.65□□□□□ -0.7
USP25-204ENST00000400183 DSPP15924 2871 aaKnown RBP10.65□□□□□ -0.7
USP25-204ENST00000400183 WDFY4Q6ZS81 3184 aa10.63□□□□□ -0.71
USP25-204ENST00000400183 RPS29P62273 56 aaKnown RBP10.62□□□□□ -0.71
USP25-204ENST00000400183 FREM2Q5SZK8 3169 aa10.62□□□□□ -0.71
USP25-204ENST00000400183 KRTAP11-1Q8IUC1 163 aa10.6□□□□□ -0.71
USP25-204ENST00000400183 Q6ZRN7 208 aaPredicted RBP10.59□□□□□ -0.71
USP25-204ENST00000400183 FRYQ5TBA9 3013 aa10.59□□□□□ -0.71
USP25-204ENST00000400183 A8MU10 97 aa10.58□□□□□ -0.72
USP25-204ENST00000400183 UNC80Q8N2C7 3258 aa10.54□□□□□ -0.72
USP25-204ENST00000400183 ITPR2Q14571 2701 aa10.53□□□□□ -0.72
USP25-204ENST00000400183 KRTAP7-1Q8IUC3 87 aa10.51□□□□□ -0.73
USP25-204ENST00000400183 VPS13AQ96RL7 3174 aa10.51□□□□□ -0.73
USP25-204ENST00000400183 XIRP2A4UGR9 3374 aa10.47□□□□□ -0.73
USP25-204ENST00000400183 PRUNE2Q8WUY3 3088 aa10.47□□□□□ -0.73
USP25-204ENST00000400183 ITPR1Q14643 2758 aa10.46□□□□□ -0.74
USP25-204ENST00000400183 KRTAP13-2Q52LG2 175 aa10.45□□□□□ -0.74
USP25-204ENST00000400183 KRTAP13-1Q8IUC0 172 aa10.43□□□□□ -0.74
USP25-204ENST00000400183 KRTAP25-1Q3LHN0 102 aa10.43□□□□□ -0.74
USP25-204ENST00000400183 A8MUU9 505 aa10.42□□□□□ -0.74
USP25-204ENST00000400183 NBEAQ8NFP9 2946 aa10.41□□□□□ -0.74
USP25-204ENST00000400183 KALRNO60229 2985 aa10.39□□□□□ -0.75
USP25-204ENST00000400183 CELSR3Q9NYQ7 3312 aa10.37□□□□□ -0.75
USP25-204ENST00000400183 KRTAP16-1A8MUX0 517 aa10.3□□□□□ -0.76
USP25-204ENST00000400183 TACC2O95359 2948 aa10.29□□□□□ -0.76
USP25-204ENST00000400183 C20orf166-AS1Q96NR2 134 aa10.28□□□□□ -0.76
USP25-204ENST00000400183 FLNCQ14315 2725 aa10.26□□□□□ -0.77
USP25-204ENST00000400183 HIVEP1P15822 2718 aa10.25□□□□□ -0.77
USP25-204ENST00000400183 UTP20O75691 2785 aaKnown RBP10.23□□□□□ -0.77
USP25-204ENST00000400183 CDH23Q9H251 3354 aa10.23□□□□□ -0.77
USP25-204ENST00000400183 KMT2BQ9UMN6 2715 aaPredicted RBP10.22□□□□□ -0.77
USP25-204ENST00000400183 TENM4Q6N022 2769 aa10.2□□□□□ -0.78
USP25-204ENST00000400183 APCP25054 2843 aa10.19□□□□□ -0.78
USP25-204ENST00000400183 DNAH14Q0VDD8 3507 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms