RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 SMIM20Q8N5G0 67 aa4.24□□□□□ -1.73
CX3CR1-202ENST00000399220 RBM3P98179 157 aaKnown RBP4.24□□□□□ -1.73
CX3CR1-202ENST00000399220 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
CX3CR1-202ENST00000399220 RYR2Q92736 4967 aa4.24□□□□□ -1.73
CX3CR1-202ENST00000399220 IGLV5-52A0A0A0MRZ9 124 aa4.24□□□□□ -1.73
CX3CR1-202ENST00000399220 J3KT08 172 aa4.24□□□□□ -1.73
CX3CR1-202ENST00000399220 ERC2-IT1O76042 136 aa4.24□□□□□ -1.73
CX3CR1-202ENST00000399220 CHTF8P0CG12 524 aa4.23□□□□□ -1.73
CX3CR1-202ENST00000399220 LINC00336Q6ZUF6 198 aa4.23□□□□□ -1.73
CX3CR1-202ENST00000399220 PHF5AQ7RTV0 110 aaKnown RBP4.23□□□□□ -1.73
CX3CR1-202ENST00000399220 TENM2Q9NT68 2774 aa4.23□□□□□ -1.73
CX3CR1-202ENST00000399220 IGKV2-24A0A0C4DH68 120 aa4.23□□□□□ -1.73
CX3CR1-202ENST00000399220 SMIM29Q86T20 159 aa4.23□□□□□ -1.73
CX3CR1-202ENST00000399220 KLKP1Q107X0 134 aa4.22□□□□□ -1.73
CX3CR1-202ENST00000399220 LINC00483Q53H64 154 aa4.22□□□□□ -1.73
CX3CR1-202ENST00000399220 CYSTM1Q9H1C7 97 aa4.22□□□□□ -1.73
CX3CR1-202ENST00000399220 SEC61GP60059 68 aa4.21□□□□□ -1.73
CX3CR1-202ENST00000399220 RPL37AP61513 92 aaKnown RBP4.21□□□□□ -1.74
CX3CR1-202ENST00000399220 TRAV7A0A075B6U4 112 aa4.21□□□□□ -1.74
CX3CR1-202ENST00000399220 DPH3Q96FX2 82 aa4.21□□□□□ -1.74
CX3CR1-202ENST00000399220 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
CX3CR1-202ENST00000399220 DSCR8Q96T75 97 aa4.2□□□□□ -1.74
CX3CR1-202ENST00000399220 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
CX3CR1-202ENST00000399220 DYNC1H1Q14204 4646 aaKnown RBP4.2□□□□□ -1.74
CX3CR1-202ENST00000399220 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
CX3CR1-202ENST00000399220 FAM19A1Q7Z5A9 133 aa4.2□□□□□ -1.74
CX3CR1-202ENST00000399220 KRTAP10-2P60368 255 aa4.19□□□□□ -1.74
CX3CR1-202ENST00000399220 LAMTOR3Q9UHA4 124 aa4.19□□□□□ -1.74
CX3CR1-202ENST00000399220 UBE2BP63146 152 aa4.19□□□□□ -1.74
CX3CR1-202ENST00000399220 UBL5Q9BZL1 73 aa4.19□□□□□ -1.74
CX3CR1-202ENST00000399220 Q6ZVQ6 151 aa4.18□□□□□ -1.74
CX3CR1-202ENST00000399220 ST20-AS1Q8NBB2 130 aa4.18□□□□□ -1.74
CX3CR1-202ENST00000399220 IGKV3D-7A0A0C4DH55 119 aa4.17□□□□□ -1.74
CX3CR1-202ENST00000399220 OXTP01178 125 aa4.17□□□□□ -1.74
CX3CR1-202ENST00000399220 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
CX3CR1-202ENST00000399220 ZNF706Q9Y5V0 76 aaPredicted RBP4.17□□□□□ -1.74
CX3CR1-202ENST00000399220 A0A087WVE0 104 aa4.17□□□□□ -1.74
CX3CR1-202ENST00000399220 H7BZZ5 65 aa4.17□□□□□ -1.74
CX3CR1-202ENST00000399220 ZNF861PO60384 105 aa4.17□□□□□ -1.74
CX3CR1-202ENST00000399220 PSORS1C2Q9UIG4 136 aa4.17□□□□□ -1.74
CX3CR1-202ENST00000399220 NDUFC1O43677 76 aa4.16□□□□□ -1.74
CX3CR1-202ENST00000399220 PRLHP81277 87 aa4.16□□□□□ -1.74
CX3CR1-202ENST00000399220 Q5XG85 94 aa4.16□□□□□ -1.74
CX3CR1-202ENST00000399220 H3BS24 57 aa4.16□□□□□ -1.74
CX3CR1-202ENST00000399220 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
CX3CR1-202ENST00000399220 Q8NBF4 154 aa4.16□□□□□ -1.74
CX3CR1-202ENST00000399220 UBE2AP49459 152 aa4.15□□□□□ -1.75
CX3CR1-202ENST00000399220 CIRBP-AS1Q8TBR5 109 aa4.15□□□□□ -1.75
CX3CR1-202ENST00000399220 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
CX3CR1-202ENST00000399220 IGLV7-43P04211 117 aa4.15□□□□□ -1.75
CX3CR1-202ENST00000399220 C5orf47Q569G3 176 aa4.14□□□□□ -1.75
CX3CR1-202ENST00000399220 C1orf137Q5JT78 98 aa4.14□□□□□ -1.75
CX3CR1-202ENST00000399220 FAM30AQ9NZY2 134 aa4.14□□□□□ -1.75
CX3CR1-202ENST00000399220 SERP1Q9Y6X1 66 aa4.14□□□□□ -1.75
CX3CR1-202ENST00000399220 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
CX3CR1-202ENST00000399220 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
CX3CR1-202ENST00000399220 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
CX3CR1-202ENST00000399220 IGFL1Q6UW32 110 aa4.13□□□□□ -1.75
CX3CR1-202ENST00000399220 SCXQ7RTU7 201 aa4.13□□□□□ -1.75
CX3CR1-202ENST00000399220 FAM229AH3BQW9 127 aa4.12□□□□□ -1.75
CX3CR1-202ENST00000399220 OCR1Q9BZK8 76 aa4.12□□□□□ -1.75
CX3CR1-202ENST00000399220 F8WEM9 126 aa4.12□□□□□ -1.75
CX3CR1-202ENST00000399220 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
CX3CR1-202ENST00000399220 FUSP35637 526 aaKnown RBP eCLIP4.12□□□□□ -1.75
CX3CR1-202ENST00000399220 DEFB105AQ8NG35 78 aa4.12□□□□□ -1.75
CX3CR1-202ENST00000399220 HIGD2AQ9BW72 106 aa4.12□□□□□ -1.75
CX3CR1-202ENST00000399220 FAM229BQ4G0N7 80 aa4.11□□□□□ -1.75
CX3CR1-202ENST00000399220 PKHD1P08F94 4074 aa4.11□□□□□ -1.75
CX3CR1-202ENST00000399220 A0A0U1RQV1 116 aa4.1□□□□□ -1.75
CX3CR1-202ENST00000399220 FAM236DA0A1B0GTK5 79 aa4.1□□□□□ -1.75
CX3CR1-202ENST00000399220 FAM236CP0DP71 79 aa4.1□□□□□ -1.75
CX3CR1-202ENST00000399220 CD164Q04900 197 aa4.1□□□□□ -1.75
CX3CR1-202ENST00000399220 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
CX3CR1-202ENST00000399220 TGP01266 2768 aa4.08□□□□□ -1.76
CX3CR1-202ENST00000399220 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
CX3CR1-202ENST00000399220 VPS13BQ7Z7G8 4022 aa4.08□□□□□ -1.76
CX3CR1-202ENST00000399220 ASB16-AS1Q495Z4 193 aa4.08□□□□□ -1.76
CX3CR1-202ENST00000399220 SSBP3-AS1Q7Z2R9 100 aa4.08□□□□□ -1.76
CX3CR1-202ENST00000399220 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
CX3CR1-202ENST00000399220 NREPQ16612 68 aa4.07□□□□□ -1.76
CX3CR1-202ENST00000399220 SPINK6Q6UWN8 80 aa4.06□□□□□ -1.76
CX3CR1-202ENST00000399220 C20orf197Q8N268 126 aa4.06□□□□□ -1.76
CX3CR1-202ENST00000399220 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
CX3CR1-202ENST00000399220 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
CX3CR1-202ENST00000399220 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
CX3CR1-202ENST00000399220 BPY2O14599 106 aa4.05□□□□□ -1.76
CX3CR1-202ENST00000399220 FP248Q71RG6 208 aaPredicted RBP4.04□□□□□ -1.76
CX3CR1-202ENST00000399220 TMEM254Q8TBM7 123 aa4.04□□□□□ -1.76
CX3CR1-202ENST00000399220 RYR3Q15413 4870 aa4.04□□□□□ -1.76
CX3CR1-202ENST00000399220 DSCR10P59022 87 aa4.04□□□□□ -1.76
CX3CR1-202ENST00000399220 Q96NJ1 140 aa4.04□□□□□ -1.76
CX3CR1-202ENST00000399220 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
CX3CR1-202ENST00000399220 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
CX3CR1-202ENST00000399220 CDK2AP2O75956 126 aa4.02□□□□□ -1.77
CX3CR1-202ENST00000399220 HAMPP81172 84 aa4.02□□□□□ -1.77
CX3CR1-202ENST00000399220 A0A087WSZ3 146 aa4.01□□□□□ -1.77
CX3CR1-202ENST00000399220 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
CX3CR1-202ENST00000399220 KRTAP29-1A8MX34 341 aaPredicted RBP4□□□□□ -1.77
CX3CR1-202ENST00000399220 MOBPQ13875 183 aa4□□□□□ -1.77
CX3CR1-202ENST00000399220 A8MWP4 228 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms