RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
PTCHD4-202ENST00000398738 PSCAO43653 123 aa6.35□□□□□ -1.39
PTCHD4-202ENST00000398738 Q8N1X5 172 aa6.35□□□□□ -1.39
PTCHD4-202ENST00000398738 FBN1P35555 2871 aaKnown RBP6.34□□□□□ -1.39
PTCHD4-202ENST00000398738 DHRS4-AS1Q9P1J3 65 aa6.34□□□□□ -1.39
PTCHD4-202ENST00000398738 A0A087WSZ3 146 aa6.34□□□□□ -1.39
PTCHD4-202ENST00000398738 LINC00476Q8WZB0 136 aa6.34□□□□□ -1.39
PTCHD4-202ENST00000398738 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
PTCHD4-202ENST00000398738 IGKV2-24A0A0C4DH68 120 aa6.33□□□□□ -1.4
PTCHD4-202ENST00000398738 INAFM1C9JVW0 142 aa6.33□□□□□ -1.4
PTCHD4-202ENST00000398738 PRLHP81277 87 aa6.33□□□□□ -1.4
PTCHD4-202ENST00000398738 STAB1Q9NY15 2570 aa6.32□□□□□ -1.4
PTCHD4-202ENST00000398738 NBEAL1Q6ZS30 2694 aa6.32□□□□□ -1.4
PTCHD4-202ENST00000398738 NSD1Q96L73 2696 aaPredicted RBP6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 DEFB131BA0A096LNP1 70 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 IGLV1-50A0A075B6I6 118 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 MP68P56378 58 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 CHKB-CPT1BH3BT56 60 aa6.29□□□□□ -1.4
PTCHD4-202ENST00000398738 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
PTCHD4-202ENST00000398738 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
PTCHD4-202ENST00000398738 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
PTCHD4-202ENST00000398738 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
PTCHD4-202ENST00000398738 Q1T7F1 81 aa6.28□□□□□ -1.4
PTCHD4-202ENST00000398738 IGFL1Q6UW32 110 aa6.28□□□□□ -1.4
PTCHD4-202ENST00000398738 B9D2Q9BPU9 175 aa6.27□□□□□ -1.41
PTCHD4-202ENST00000398738 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 PRR15LQ9BU68 103 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 LINC01556Q5JQF7 62 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 REG3GQ6UW15 175 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 H0Y9P7 68 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 PRR15Q8IV56 129 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 C11orf45Q8TAV5 145 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 LCE6AA0A183 80 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 H0Y9J4 135 aa6.24□□□□□ -1.41
PTCHD4-202ENST00000398738 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 UBE2AP49459 152 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 NDUFB1O75438 58 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 SPRR1AP35321 89 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP10-11P60412 298 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 Q5VV11 94 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 CYP4F30PQ9H0H9 118 aa6.21□□□□□ -1.42
PTCHD4-202ENST00000398738 A6NED7 52 aa6.2□□□□□ -1.42
PTCHD4-202ENST00000398738 LINC00588Q9Y4M8 146 aa6.2□□□□□ -1.42
PTCHD4-202ENST00000398738 A0A1B0GW54 56 aa6.2□□□□□ -1.42
PTCHD4-202ENST00000398738 CHTF8P0CG12 524 aa6.19□□□□□ -1.42
PTCHD4-202ENST00000398738 ANK2Q01484 3957 aa6.19□□□□□ -1.42
PTCHD4-202ENST00000398738 H3BNG1 76 aa6.19□□□□□ -1.42
PTCHD4-202ENST00000398738 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
PTCHD4-202ENST00000398738 TLX1NBP0CAT3 122 aa6.18□□□□□ -1.42
PTCHD4-202ENST00000398738 C16orf90A8MZG2 172 aa6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 DNAH10OSP0CZ25 163 aa6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 NDUFS5O43920 106 aa6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
PTCHD4-202ENST00000398738 PHF5AQ7RTV0 110 aaKnown RBP6.16□□□□□ -1.42
PTCHD4-202ENST00000398738 MGAM2Q2M2H8 2515 aa6.16□□□□□ -1.42
PTCHD4-202ENST00000398738 COA5Q86WW8 74 aa6.15□□□□□ -1.43
PTCHD4-202ENST00000398738 IGLV5-37A0A075B6J1 123 aa6.14□□□□□ -1.43
PTCHD4-202ENST00000398738 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
PTCHD4-202ENST00000398738 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
PTCHD4-202ENST00000398738 STAB2Q8WWQ8 2551 aa6.13□□□□□ -1.43
PTCHD4-202ENST00000398738 IGLV9-49A0A0B4J1Y8 123 aa6.13□□□□□ -1.43
PTCHD4-202ENST00000398738 LIMD2Q9BT23 127 aa6.13□□□□□ -1.43
PTCHD4-202ENST00000398738 DNAH10Q8IVF4 4471 aa6.13□□□□□ -1.43
PTCHD4-202ENST00000398738 LCA10Q71F78 164 aa6.12□□□□□ -1.43
PTCHD4-202ENST00000398738 A8MWP4 228 aa6.12□□□□□ -1.43
PTCHD4-202ENST00000398738 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
PTCHD4-202ENST00000398738 CMYA5Q8N3K9 4069 aa6.08□□□□□ -1.44
PTCHD4-202ENST00000398738 IGHV6-1A0A0B4J1U7 121 aa6.08□□□□□ -1.44
PTCHD4-202ENST00000398738 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
PTCHD4-202ENST00000398738 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP1-5Q9BYS1 174 aa6.07□□□□□ -1.44
PTCHD4-202ENST00000398738 CD164Q04900 197 aa6.07□□□□□ -1.44
PTCHD4-202ENST00000398738 C9orf163Q8N9P6 203 aa6.07□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 LYSTQ99698 3801 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
PTCHD4-202ENST00000398738 UBE2DNLQ8IWF7 75 aa6.05□□□□□ -1.44
PTCHD4-202ENST00000398738 ANAPC11Q9NYG5 84 aa6.05□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP24-1Q3LI83 254 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 LOC101927531A0A1B0GV80 90 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 H3BPC8 53 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 SPINK7P58062 85 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms