RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 M0R143 59 aa14.47□□□□□ -0.09
TSPAN4-207ENST00000397411 RPS29P62273 56 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-207ENST00000397411 K7ERJ3 54 aa14.46□□□□□ -0.09
TSPAN4-207ENST00000397411 PSMB2P49721 201 aa14.46□□□□□ -0.09
TSPAN4-207ENST00000397411 SNHG12Q9BXW3 62 aa14.44□□□□□ -0.1
TSPAN4-207ENST00000397411 COX6CP09669 75 aa14.42□□□□□ -0.1
TSPAN4-207ENST00000397411 TRIAP1O43715 76 aa14.41□□□□□ -0.1
TSPAN4-207ENST00000397411 PPDPFLQ8WWR9 84 aa14.41□□□□□ -0.1
TSPAN4-207ENST00000397411 GHRHP01286 108 aa14.4□□□□□ -0.1
TSPAN4-207ENST00000397411 OCIAD2Q56VL3 154 aa14.4□□□□□ -0.1
TSPAN4-207ENST00000397411 FP248Q71RG6 208 aaPredicted RBP14.4□□□□□ -0.1
TSPAN4-207ENST00000397411 FAM218AQ96MZ4 157 aa14.4□□□□□ -0.1
TSPAN4-207ENST00000397411 LIMD2Q9BT23 127 aa14.4□□□□□ -0.1
TSPAN4-207ENST00000397411 A0A1B0GX51 115 aa14.39□□□□□ -0.11
TSPAN4-207ENST00000397411 CD164Q04900 197 aa14.39□□□□□ -0.11
TSPAN4-207ENST00000397411 LRP2P98164 4655 aa14.39□□□□□ -0.11
TSPAN4-207ENST00000397411 UBR4Q5T4S7 5183 aa14.36□□□□□ -0.11
TSPAN4-207ENST00000397411 A0A0G2JQZ4 141 aa14.35□□□□□ -0.11
TSPAN4-207ENST00000397411 CLEC2BQ92478 149 aa14.34□□□□□ -0.11
TSPAN4-207ENST00000397411 LPAP08519 4548 aa14.34□□□□□ -0.11
TSPAN4-207ENST00000397411 Q6JHZ5 121 aa14.33□□□□□ -0.12
TSPAN4-207ENST00000397411 CDIP1Q9H305 208 aa14.33□□□□□ -0.12
TSPAN4-207ENST00000397411 SCGB1C2P0DMR2 95 aa14.31□□□□□ -0.12
TSPAN4-207ENST00000397411 DNAL4O96015 105 aa14.3□□□□□ -0.12
TSPAN4-207ENST00000397411 FABP2P12104 132 aa14.3□□□□□ -0.12
TSPAN4-207ENST00000397411 TPRXLQ17RH7 258 aa14.3□□□□□ -0.12
TSPAN4-207ENST00000397411 IGLV8-61A0A075B6I0 122 aa14.27□□□□□ -0.13
TSPAN4-207ENST00000397411 H3BQ85 93 aa14.26□□□□□ -0.13
TSPAN4-207ENST00000397411 NDUFV3P56181 108 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-207ENST00000397411 H3BUT2 72 aa14.24□□□□□ -0.13
TSPAN4-207ENST00000397411 IGFL1Q6UW32 110 aa14.24□□□□□ -0.13
TSPAN4-207ENST00000397411 TCL1BO95988 128 aa14.22□□□□□ -0.13
TSPAN4-207ENST00000397411 ORMDL1Q9P0S3 153 aa14.22□□□□□ -0.13
TSPAN4-207ENST00000397411 Q5XG85 94 aa14.2□□□□□ -0.14
TSPAN4-207ENST00000397411 H3BMG7 143 aa14.18□□□□□ -0.14
TSPAN4-207ENST00000397411 BATFQ16520 125 aa14.18□□□□□ -0.14
TSPAN4-207ENST00000397411 KRTAP13-3Q3SY46 172 aa14.18□□□□□ -0.14
TSPAN4-207ENST00000397411 LYRM7Q5U5X0 104 aa14.17□□□□□ -0.14
TSPAN4-207ENST00000397411 TMEM256-PLSCR3K7ERE1 68 aa14.15□□□□□ -0.14
TSPAN4-207ENST00000397411 TRACP01848 142 aa14.15□□□□□ -0.14
TSPAN4-207ENST00000397411 TRBV7-7A0A0K0K1E9 115 aa14.14□□□□□ -0.15
TSPAN4-207ENST00000397411 LST1O00453 97 aa14.13□□□□□ -0.15
TSPAN4-207ENST00000397411 C1orf195Q5TG92 126 aa14.12□□□□□ -0.15
TSPAN4-207ENST00000397411 NAA38Q9BRA0 125 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-207ENST00000397411 A0A1B0GV72 72 aa14.07□□□□□ -0.16
TSPAN4-207ENST00000397411 ATXN8Q156A1 80 aa14.07□□□□□ -0.16
TSPAN4-207ENST00000397411 TEN1Q86WV5 123 aa14.07□□□□□ -0.16
TSPAN4-207ENST00000397411 ANKRD29Q8N6D5 301 aa14.05□□□□□ -0.16
TSPAN4-207ENST00000397411 UBE2V1Q13404 147 aa14.04□□□□□ -0.16
TSPAN4-207ENST00000397411 Q6Q795 121 aa14.03□□□□□ -0.16
TSPAN4-207ENST00000397411 C9orf92A6NGG3 77 aa14.02□□□□□ -0.17
TSPAN4-207ENST00000397411 BAALC-AS2P0C853 105 aa14.02□□□□□ -0.17
TSPAN4-207ENST00000397411 ASB16-AS1Q495Z4 193 aa14.02□□□□□ -0.17
TSPAN4-207ENST00000397411 TRBV20-1A0A075B6N2 111 aa14.01□□□□□ -0.17
TSPAN4-207ENST00000397411 SS18L2Q9UHA2 77 aa14.01□□□□□ -0.17
TSPAN4-207ENST00000397411 RNF213Q63HN8 5207 aa14□□□□□ -0.17
TSPAN4-207ENST00000397411 C9orf118A6NHY6 69 aa13.97□□□□□ -0.17
TSPAN4-207ENST00000397411 A0A087WSZ3 146 aa13.96□□□□□ -0.17
TSPAN4-207ENST00000397411 SEC61BP60468 96 aaKnown RBP13.94□□□□□ -0.18
TSPAN4-207ENST00000397411 XP32Q5T750 250 aa13.94□□□□□ -0.18
TSPAN4-207ENST00000397411 A0A1W2PNM2 257 aa13.93□□□□□ -0.18
TSPAN4-207ENST00000397411 RBM3P98179 157 aaKnown RBP13.93□□□□□ -0.18
TSPAN4-207ENST00000397411 TAX1BP3O14907 124 aa13.92□□□□□ -0.18
TSPAN4-207ENST00000397411 COL5A1-AS1Q5SY13 56 aa13.9□□□□□ -0.18
TSPAN4-207ENST00000397411 DSCR8Q96T75 97 aa13.9□□□□□ -0.18
TSPAN4-207ENST00000397411 TRBV7-4A0A0J9YYF1 115 aa13.89□□□□□ -0.19
TSPAN4-207ENST00000397411 A0A1W2PPM0 123 aa13.89□□□□□ -0.19
TSPAN4-207ENST00000397411 CCKP06307 115 aa13.89□□□□□ -0.19
TSPAN4-207ENST00000397411 VPS25Q9BRG1 176 aa13.88□□□□□ -0.19
TSPAN4-207ENST00000397411 C9JAW5 83 aa13.83□□□□□ -0.2
TSPAN4-207ENST00000397411 JMJD7-PLA2G4BH0Y9G9 81 aa13.83□□□□□ -0.2
TSPAN4-207ENST00000397411 PCP4L1A6NKN8 68 aa13.82□□□□□ -0.2
TSPAN4-207ENST00000397411 MUC17Q685J3 4493 aa13.81□□□□□ -0.2
TSPAN4-207ENST00000397411 A0A0U1RQV1 116 aa13.8□□□□□ -0.2
TSPAN4-207ENST00000397411 C21orf62-AS1Q17RA5 79 aa13.79□□□□□ -0.2
TSPAN4-207ENST00000397411 H3BT86 120 aa13.75□□□□□ -0.21
TSPAN4-207ENST00000397411 SPCS1Q9Y6A9 102 aa13.75□□□□□ -0.21
TSPAN4-207ENST00000397411 PDE6GP18545 87 aa13.74□□□□□ -0.21
TSPAN4-207ENST00000397411 OBSCN-AS1Q96MR7 158 aa13.74□□□□□ -0.21
TSPAN4-207ENST00000397411 SIGMAR1Q99720 223 aa13.74□□□□□ -0.21
TSPAN4-207ENST00000397411 Q96NJ1 140 aa13.73□□□□□ -0.21
TSPAN4-207ENST00000397411 PCOTHQ58A44 107 aa13.72□□□□□ -0.21
TSPAN4-207ENST00000397411 IGKV4-1P06312 121 aa13.71□□□□□ -0.21
TSPAN4-207ENST00000397411 MUC2Q02817 5179 aa13.69□□□□□ -0.22
TSPAN4-207ENST00000397411 RPL37P61927 97 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-207ENST00000397411 LOC110117498A0A087WWA1 95 aa13.67□□□□□ -0.22
TSPAN4-207ENST00000397411 DEFB116Q30KQ4 102 aa13.67□□□□□ -0.22
TSPAN4-207ENST00000397411 C14orf132Q9NPU4 83 aa13.67□□□□□ -0.22
TSPAN4-207ENST00000397411 A0A1B0GW54 56 aa13.66□□□□□ -0.22
TSPAN4-207ENST00000397411 Q6ZQT0 140 aa13.66□□□□□ -0.22
TSPAN4-207ENST00000397411 MTURNQ8N3F0 131 aa13.66□□□□□ -0.22
TSPAN4-207ENST00000397411 LINC00472Q9H8W2 130 aa13.64□□□□□ -0.23
TSPAN4-207ENST00000397411 KRTAP4-1Q9BYQ7 146 aa13.61□□□□□ -0.23
TSPAN4-207ENST00000397411 K7EP34 96 aa13.6□□□□□ -0.23
TSPAN4-207ENST00000397411 GTF2H5Q6ZYL4 71 aa13.6□□□□□ -0.23
TSPAN4-207ENST00000397411 DSCR10P59022 87 aa13.59□□□□□ -0.23
TSPAN4-207ENST00000397411 LINC00313P59037 77 aa13.57□□□□□ -0.24
TSPAN4-207ENST00000397411 ATP11AUNQ6ZP68 121 aa13.56□□□□□ -0.24
TSPAN4-207ENST00000397411 Q75L30 129 aa13.55□□□□□ -0.24
TSPAN4-207ENST00000397411 J3KT08 172 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms