RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 MMP24-AS1A0A0U1RRL7 71 aa7.56□□□□□ -1.2
SMU1-201ENST00000397149 Q5VV11 94 aa7.55□□□□□ -1.2
SMU1-201ENST00000397149 Q8NDZ9 215 aa7.54□□□□□ -1.2
SMU1-201ENST00000397149 MGAM2Q2M2H8 2515 aa7.54□□□□□ -1.2
SMU1-201ENST00000397149 EPG5Q9HCE0 2579 aa7.53□□□□□ -1.2
SMU1-201ENST00000397149 ANKRD11Q6UB99 2663 aaPredicted RBP7.51□□□□□ -1.21
SMU1-201ENST00000397149 CDH23Q9H251 3354 aa7.5□□□□□ -1.21
SMU1-201ENST00000397149 DNAH14Q0VDD8 3507 aa7.49□□□□□ -1.21
SMU1-201ENST00000397149 Q5XG85 94 aa7.45□□□□□ -1.22
SMU1-201ENST00000397149 UNC80Q8N2C7 3258 aa7.43□□□□□ -1.22
SMU1-201ENST00000397149 SZT2Q5T011 3432 aa7.43□□□□□ -1.22
SMU1-201ENST00000397149 LAMA2P24043 3122 aaKnown RBP7.42□□□□□ -1.22
SMU1-201ENST00000397149 PLAC8Q9NZF1 115 aa7.41□□□□□ -1.22
SMU1-201ENST00000397149 CYSTM1Q9H1C7 97 aa7.41□□□□□ -1.22
SMU1-201ENST00000397149 PRUNE2Q8WUY3 3088 aa7.39□□□□□ -1.23
SMU1-201ENST00000397149 ATRQ13535 2644 aa7.38□□□□□ -1.23
SMU1-201ENST00000397149 A0A096LNT2 108 aa7.38□□□□□ -1.23
SMU1-201ENST00000397149 HTTP42858 3142 aa7.37□□□□□ -1.23
SMU1-201ENST00000397149 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
SMU1-201ENST00000397149 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
SMU1-201ENST00000397149 CHD7Q9P2D1 2997 aa7.35□□□□□ -1.23
SMU1-201ENST00000397149 HECTD1Q9ULT8 2610 aa7.34□□□□□ -1.23
SMU1-201ENST00000397149 RANBP2P49792 3224 aaKnown RBP7.34□□□□□ -1.23
SMU1-201ENST00000397149 A8MU10 97 aa7.34□□□□□ -1.24
SMU1-201ENST00000397149 DMBT1Q9UGM3 2413 aaPredicted RBP7.33□□□□□ -1.24
SMU1-201ENST00000397149 LINC00472Q9H8W2 130 aa7.33□□□□□ -1.24
SMU1-201ENST00000397149 CELSR3Q9NYQ7 3312 aa7.32□□□□□ -1.24
SMU1-201ENST00000397149 Q6ZR54 194 aa7.32□□□□□ -1.24
SMU1-201ENST00000397149 KRTAP10-1P60331 282 aa7.31□□□□□ -1.24
SMU1-201ENST00000397149 CEP295Q9C0D2 2601 aa7.31□□□□□ -1.24
SMU1-201ENST00000397149 A8MUU9 505 aa7.3□□□□□ -1.24
SMU1-201ENST00000397149 PANO1I0J062 215 aa7.29□□□□□ -1.24
SMU1-201ENST00000397149 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
SMU1-201ENST00000397149 KRTAP26-1Q6PEX3 210 aa7.29□□□□□ -1.24
SMU1-201ENST00000397149 MAST4O15021 2626 aa7.27□□□□□ -1.25
SMU1-201ENST00000397149 OXTP01178 125 aa7.25□□□□□ -1.25
SMU1-201ENST00000397149 PRRC2CQ9Y520 2896 aaKnown RBP7.25□□□□□ -1.25
SMU1-201ENST00000397149 SPRR1BP22528 89 aa7.25□□□□□ -1.25
SMU1-201ENST00000397149 CFAP54Q96N23 3096 aa7.24□□□□□ -1.25
SMU1-201ENST00000397149 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
SMU1-201ENST00000397149 A0A0C4DFX4 3053 aa7.22□□□□□ -1.25
SMU1-201ENST00000397149 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
SMU1-201ENST00000397149 STAB2Q8WWQ8 2551 aa7.2□□□□□ -1.26
SMU1-201ENST00000397149 STAB1Q9NY15 2570 aa7.2□□□□□ -1.26
SMU1-201ENST00000397149 SPRR1AP35321 89 aa7.19□□□□□ -1.26
SMU1-201ENST00000397149 KRTAP1-1Q07627 177 aa7.18□□□□□ -1.26
SMU1-201ENST00000397149 KRTAP1-5Q9BYS1 174 aa7.18□□□□□ -1.26
SMU1-201ENST00000397149 TNP1P09430 55 aa7.18□□□□□ -1.26
SMU1-201ENST00000397149 TRIOO75962 3097 aa7.17□□□□□ -1.26
SMU1-201ENST00000397149 LCE6AA0A183 80 aa7.17□□□□□ -1.26
SMU1-201ENST00000397149 FLNBO75369 2602 aaKnown RBP7.17□□□□□ -1.26
SMU1-201ENST00000397149 SPTBN5Q9NRC6 3674 aaKnown RBP7.16□□□□□ -1.26
SMU1-201ENST00000397149 USP34Q70CQ2 3546 aa7.14□□□□□ -1.27
SMU1-201ENST00000397149 VCANP13611 3396 aa7.14□□□□□ -1.27
SMU1-201ENST00000397149 A0A087X002 238 aa7.14□□□□□ -1.27
SMU1-201ENST00000397149 CFAP46Q8IYW2 2715 aa7.13□□□□□ -1.27
SMU1-201ENST00000397149 MYO15AQ9UKN7 3530 aa7.12□□□□□ -1.27
SMU1-201ENST00000397149 ITPR3Q14573 2671 aa7.12□□□□□ -1.27
SMU1-201ENST00000397149 NOTCH2NLQ7Z3S9 236 aa7.1□□□□□ -1.27
SMU1-201ENST00000397149 KRTAP10-8P60410 259 aa7.09□□□□□ -1.27
SMU1-201ENST00000397149 SPEGQ15772 3267 aa7.09□□□□□ -1.27
SMU1-201ENST00000397149 EYSQ5T1H1 3165 aa7.08□□□□□ -1.28
SMU1-201ENST00000397149 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
SMU1-201ENST00000397149 VPS13AQ96RL7 3174 aa7.06□□□□□ -1.28
SMU1-201ENST00000397149 AKAP13Q12802 2813 aa7.05□□□□□ -1.28
SMU1-201ENST00000397149 P0C880 135 aa7.05□□□□□ -1.28
SMU1-201ENST00000397149 CHD9Q3L8U1 2897 aa7.04□□□□□ -1.28
SMU1-201ENST00000397149 ASB16-AS1Q495Z4 193 aa7.04□□□□□ -1.28
SMU1-201ENST00000397149 LAMA1P25391 3075 aa7.04□□□□□ -1.28
SMU1-201ENST00000397149 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
SMU1-201ENST00000397149 COL6A3P12111 3177 aa7.03□□□□□ -1.28
SMU1-201ENST00000397149 WDFY4Q6ZS81 3184 aa7.01□□□□□ -1.29
SMU1-201ENST00000397149 FREM2Q5SZK8 3169 aa6.96□□□□□ -1.3
SMU1-201ENST00000397149 A6NN06 94 aa6.95□□□□□ -1.3
SMU1-201ENST00000397149 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
SMU1-201ENST00000397149 MGAQ8IWI9 3026 aa6.92□□□□□ -1.3
SMU1-201ENST00000397149 FLNAP21333 2647 aaKnown RBP6.91□□□□□ -1.3
SMU1-201ENST00000397149 KRTAP4-16G5E9R7 235 aaPredicted RBP6.87□□□□□ -1.31
SMU1-201ENST00000397149 TRANK1O15050 2925 aa6.87□□□□□ -1.31
SMU1-201ENST00000397149 WDFY3Q8IZQ1 3526 aa6.86□□□□□ -1.31
SMU1-201ENST00000397149 CHD6Q8TD26 2715 aa6.84□□□□□ -1.31
SMU1-201ENST00000397149 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
SMU1-201ENST00000397149 BAHCC1Q9P281 2608 aa6.82□□□□□ -1.32
SMU1-201ENST00000397149 REV3LO60673 3130 aa6.82□□□□□ -1.32
SMU1-201ENST00000397149 TEX15Q9BXT5 2789 aa6.81□□□□□ -1.32
SMU1-201ENST00000397149 CENPEQ02224 2701 aa6.8□□□□□ -1.32
SMU1-201ENST00000397149 FRYLO94915 3013 aa6.78□□□□□ -1.32
SMU1-201ENST00000397149 SETXQ7Z333 2677 aaKnown RBP6.77□□□□□ -1.32
SMU1-201ENST00000397149 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
SMU1-201ENST00000397149 HELZ2Q9BYK8 2649 aaKnown RBP6.76□□□□□ -1.33
SMU1-201ENST00000397149 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
SMU1-201ENST00000397149 NOTCH1P46531 2555 aa6.75□□□□□ -1.33
SMU1-201ENST00000397149 KRTAP13-2Q52LG2 175 aa6.75□□□□□ -1.33
SMU1-201ENST00000397149 UNC79Q9P2D8 2635 aa6.74□□□□□ -1.33
SMU1-201ENST00000397149 BOD1L1Q8NFC6 3051 aa6.74□□□□□ -1.33
SMU1-201ENST00000397149 COL6A5A8TX70 2615 aa6.73□□□□□ -1.33
SMU1-201ENST00000397149 FRYQ5TBA9 3013 aa6.72□□□□□ -1.33
SMU1-201ENST00000397149 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
SMU1-201ENST00000397149 ASPMQ8IZT6 3477 aa6.71□□□□□ -1.33
SMU1-201ENST00000397149 RPS29P62273 56 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms