RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 COX6CP09669 75 aa16.93■□□□□ 0.3
CHCHD4-202ENST00000396914 SPINK1P00995 79 aa16.92■□□□□ 0.3
CHCHD4-202ENST00000396914 F8WEM9 126 aa16.91■□□□□ 0.3
CHCHD4-202ENST00000396914 RETNLBQ9BQ08 111 aa16.9■□□□□ 0.3
CHCHD4-202ENST00000396914 CLEC2BQ92478 149 aa16.89■□□□□ 0.29
CHCHD4-202ENST00000396914 HRCT1Q6UXD1 115 aa16.87■□□□□ 0.29
CHCHD4-202ENST00000396914 SNHG12Q9BXW3 62 aa16.86■□□□□ 0.29
CHCHD4-202ENST00000396914 A0A1B0GX51 115 aa16.85■□□□□ 0.29
CHCHD4-202ENST00000396914 SCGB1C2P0DMR2 95 aa16.85■□□□□ 0.29
CHCHD4-202ENST00000396914 BATFQ16520 125 aa16.85■□□□□ 0.29
CHCHD4-202ENST00000396914 OCIAD2Q56VL3 154 aa16.84■□□□□ 0.29
CHCHD4-202ENST00000396914 PPDPFLQ8WWR9 84 aa16.84■□□□□ 0.29
CHCHD4-202ENST00000396914 DNAL4O96015 105 aa16.81■□□□□ 0.28
CHCHD4-202ENST00000396914 A0A0G2JQZ4 141 aa16.78■□□□□ 0.28
CHCHD4-202ENST00000396914 GHRHP01286 108 aa16.78■□□□□ 0.28
CHCHD4-202ENST00000396914 RPS29P62273 56 aaKnown RBP16.77■□□□□ 0.27
CHCHD4-202ENST00000396914 FABP2P12104 132 aa16.75■□□□□ 0.27
CHCHD4-202ENST00000396914 NAA38Q9BRA0 125 aaKnown RBP16.73■□□□□ 0.27
CHCHD4-202ENST00000396914 CD164Q04900 197 aa16.71■□□□□ 0.27
CHCHD4-202ENST00000396914 LIMD2Q9BT23 127 aa16.71■□□□□ 0.27
CHCHD4-202ENST00000396914 ORMDL1Q9P0S3 153 aa16.7■□□□□ 0.26
CHCHD4-202ENST00000396914 Q6JHZ5 121 aa16.7■□□□□ 0.26
CHCHD4-202ENST00000396914 IGLV7-46A0A075B6I9 117 aa16.69■□□□□ 0.26
CHCHD4-202ENST00000396914 NDUFV3P56181 108 aaKnown RBP16.69■□□□□ 0.26
CHCHD4-202ENST00000396914 H3BUT2 72 aa16.68■□□□□ 0.26
CHCHD4-202ENST00000396914 IGLV8-61A0A075B6I0 122 aa16.67■□□□□ 0.26
CHCHD4-202ENST00000396914 IGFL1Q6UW32 110 aa16.65■□□□□ 0.26
CHCHD4-202ENST00000396914 LST1O00453 97 aa16.64■□□□□ 0.25
CHCHD4-202ENST00000396914 TRACP01848 142 aa16.64■□□□□ 0.25
CHCHD4-202ENST00000396914 FP248Q71RG6 208 aaPredicted RBP16.63■□□□□ 0.25
CHCHD4-202ENST00000396914 H3BQ85 93 aa16.62■□□□□ 0.25
CHCHD4-202ENST00000396914 LRP2P98164 4655 aa16.61■□□□□ 0.25
CHCHD4-202ENST00000396914 H3BMG7 143 aa16.61■□□□□ 0.25
CHCHD4-202ENST00000396914 TMEM256-PLSCR3K7ERE1 68 aa16.6■□□□□ 0.25
CHCHD4-202ENST00000396914 LPAP08519 4548 aa16.59■□□□□ 0.25
CHCHD4-202ENST00000396914 ATXN8Q156A1 80 aa16.57■□□□□ 0.24
CHCHD4-202ENST00000396914 A0A1B0GV72 72 aa16.56■□□□□ 0.24
CHCHD4-202ENST00000396914 LYRM7Q5U5X0 104 aa16.56■□□□□ 0.24
CHCHD4-202ENST00000396914 TCL1BO95988 128 aa16.54■□□□□ 0.24
CHCHD4-202ENST00000396914 TRBV7-7A0A0K0K1E9 115 aa16.5■□□□□ 0.23
CHCHD4-202ENST00000396914 TPRXLQ17RH7 258 aa16.5■□□□□ 0.23
CHCHD4-202ENST00000396914 C9orf118A6NHY6 69 aa16.49■□□□□ 0.23
CHCHD4-202ENST00000396914 Q5XG85 94 aa16.49■□□□□ 0.23
CHCHD4-202ENST00000396914 CDIP1Q9H305 208 aa16.49■□□□□ 0.23
CHCHD4-202ENST00000396914 TAX1BP3O14907 124 aa16.48■□□□□ 0.23
CHCHD4-202ENST00000396914 BAALC-AS2P0C853 105 aa16.48■□□□□ 0.23
CHCHD4-202ENST00000396914 UBE2V1Q13404 147 aa16.47■□□□□ 0.23
CHCHD4-202ENST00000396914 UBR4Q5T4S7 5183 aa16.47■□□□□ 0.23
CHCHD4-202ENST00000396914 PCP4L1A6NKN8 68 aa16.45■□□□□ 0.22
CHCHD4-202ENST00000396914 ANKRD29Q8N6D5 301 aa16.45■□□□□ 0.22
CHCHD4-202ENST00000396914 TRBV20-1A0A075B6N2 111 aa16.44■□□□□ 0.22
CHCHD4-202ENST00000396914 TEN1Q86WV5 123 aa16.43■□□□□ 0.22
CHCHD4-202ENST00000396914 C1orf195Q5TG92 126 aa16.41■□□□□ 0.22
CHCHD4-202ENST00000396914 A0A1W2PPM0 123 aa16.4■□□□□ 0.22
CHCHD4-202ENST00000396914 KRTAP13-3Q3SY46 172 aa16.38■□□□□ 0.21
CHCHD4-202ENST00000396914 COL5A1-AS1Q5SY13 56 aa16.37■□□□□ 0.21
CHCHD4-202ENST00000396914 Q6Q795 121 aa16.37■□□□□ 0.21
CHCHD4-202ENST00000396914 C9JAW5 83 aa16.35■□□□□ 0.21
CHCHD4-202ENST00000396914 RBM3P98179 157 aaKnown RBP16.34■□□□□ 0.21
CHCHD4-202ENST00000396914 A0A1W2PNM2 257 aa16.33■□□□□ 0.2
CHCHD4-202ENST00000396914 SS18L2Q9UHA2 77 aa16.33■□□□□ 0.2
CHCHD4-202ENST00000396914 A0A087WSZ3 146 aa16.32■□□□□ 0.2
CHCHD4-202ENST00000396914 ASB16-AS1Q495Z4 193 aa16.31■□□□□ 0.2
CHCHD4-202ENST00000396914 DSCR8Q96T75 97 aa16.31■□□□□ 0.2
CHCHD4-202ENST00000396914 CCKP06307 115 aa16.29■□□□□ 0.2
CHCHD4-202ENST00000396914 VPS25Q9BRG1 176 aa16.28■□□□□ 0.2
CHCHD4-202ENST00000396914 C9orf92A6NGG3 77 aa16.26■□□□□ 0.19
CHCHD4-202ENST00000396914 TRBV7-4A0A0J9YYF1 115 aa16.25■□□□□ 0.19
CHCHD4-202ENST00000396914 SPCS1Q9Y6A9 102 aa16.25■□□□□ 0.19
CHCHD4-202ENST00000396914 JMJD7-PLA2G4BH0Y9G9 81 aa16.23■□□□□ 0.19
CHCHD4-202ENST00000396914 MTURNQ8N3F0 131 aa16.21■□□□□ 0.19
CHCHD4-202ENST00000396914 H3BT86 120 aa16.15■□□□□ 0.18
CHCHD4-202ENST00000396914 XP32Q5T750 250 aa16.14■□□□□ 0.17
CHCHD4-202ENST00000396914 C14orf132Q9NPU4 83 aa16.11■□□□□ 0.17
CHCHD4-202ENST00000396914 LOC110117498A0A087WWA1 95 aa16.08■□□□□ 0.16
CHCHD4-202ENST00000396914 Q6ZQT0 140 aa16.08■□□□□ 0.16
CHCHD4-202ENST00000396914 PDE6GP18545 87 aa16.07■□□□□ 0.16
CHCHD4-202ENST00000396914 RNF213Q63HN8 5207 aa16.07■□□□□ 0.16
CHCHD4-202ENST00000396914 Q96NJ1 140 aa16.06■□□□□ 0.16
CHCHD4-202ENST00000396914 SIGMAR1Q99720 223 aa16.05■□□□□ 0.16
CHCHD4-202ENST00000396914 K7EP34 96 aa16.04■□□□□ 0.16
CHCHD4-202ENST00000396914 OBSCN-AS1Q96MR7 158 aa16.04■□□□□ 0.16
CHCHD4-202ENST00000396914 SEC61BP60468 96 aaKnown RBP16.03■□□□□ 0.16
CHCHD4-202ENST00000396914 C21orf62-AS1Q17RA5 79 aa16.02■□□□□ 0.15
CHCHD4-202ENST00000396914 IGKV4-1P06312 121 aa16.01■□□□□ 0.15
CHCHD4-202ENST00000396914 DEFB116Q30KQ4 102 aa16.01■□□□□ 0.15
CHCHD4-202ENST00000396914 GTF2H5Q6ZYL4 71 aa15.97■□□□□ 0.15
CHCHD4-202ENST00000396914 LINC00472Q9H8W2 130 aa15.95■□□□□ 0.14
CHCHD4-202ENST00000396914 MUC17Q685J3 4493 aa15.93■□□□□ 0.14
CHCHD4-202ENST00000396914 SMCPP49901 116 aaPredicted RBP15.93■□□□□ 0.14
CHCHD4-202ENST00000396914 A0A1B0GW54 56 aa15.92■□□□□ 0.14
CHCHD4-202ENST00000396914 PRO0461Q9UI25 63 aa15.88■□□□□ 0.13
CHCHD4-202ENST00000396914 DSCR10P59022 87 aa15.85■□□□□ 0.13
CHCHD4-202ENST00000396914 PCOTHQ58A44 107 aa15.85■□□□□ 0.13
CHCHD4-202ENST00000396914 RPL37P61927 97 aaKnown RBP15.84■□□□□ 0.13
CHCHD4-202ENST00000396914 J3KT08 172 aa15.81■□□□□ 0.12
CHCHD4-202ENST00000396914 MUC2Q02817 5179 aa15.81■□□□□ 0.12
CHCHD4-202ENST00000396914 IGHV6-1A0A0B4J1U7 121 aa15.8■□□□□ 0.12
CHCHD4-202ENST00000396914 LINC00313P59037 77 aa15.79■□□□□ 0.12
CHCHD4-202ENST00000396914 NREPQ16612 68 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 579.7 ms