RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 UBE2AP49459 152 aa11.91□□□□□ -0.5
LMNB1-202ENST00000395354 SCGB1A1P11684 91 aa11.9□□□□□ -0.5
LMNB1-202ENST00000395354 LINC00846Q9NV44 126 aa11.9□□□□□ -0.5
LMNB1-202ENST00000395354 HIGD2AQ9BW72 106 aa11.89□□□□□ -0.51
LMNB1-202ENST00000395354 KRTAP13-1Q8IUC0 172 aa11.88□□□□□ -0.51
LMNB1-202ENST00000395354 Q6Q795 121 aa11.84□□□□□ -0.51
LMNB1-202ENST00000395354 SMR3BP02814 79 aaPredicted RBP11.84□□□□□ -0.51
LMNB1-202ENST00000395354 SPRR1BP22528 89 aa11.84□□□□□ -0.51
LMNB1-202ENST00000395354 SMIM29Q86T20 159 aa11.84□□□□□ -0.51
LMNB1-202ENST00000395354 APOBP04114 4563 aaKnown RBP11.83□□□□□ -0.52
LMNB1-202ENST00000395354 TRBV7-7A0A0K0K1E9 115 aa11.82□□□□□ -0.52
LMNB1-202ENST00000395354 C3orf22Q8N5N4 141 aa11.82□□□□□ -0.52
LMNB1-202ENST00000395354 IMUPQ9GZP8 106 aa11.82□□□□□ -0.52
LMNB1-202ENST00000395354 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
LMNB1-202ENST00000395354 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
LMNB1-202ENST00000395354 A0A1B0GW54 56 aa11.8□□□□□ -0.52
LMNB1-202ENST00000395354 F8WEM9 126 aa11.8□□□□□ -0.52
LMNB1-202ENST00000395354 Q6JHZ5 121 aa11.8□□□□□ -0.52
LMNB1-202ENST00000395354 IGLV8-61A0A075B6I0 122 aa11.78□□□□□ -0.52
LMNB1-202ENST00000395354 C1orf137Q5JT78 98 aa11.78□□□□□ -0.52
LMNB1-202ENST00000395354 ATP5EP2Q5VTU8 51 aa11.77□□□□□ -0.53
LMNB1-202ENST00000395354 KIAA1109Q2LD37 5005 aa11.76□□□□□ -0.53
LMNB1-202ENST00000395354 BIRC6Q9NR09 4857 aa11.76□□□□□ -0.53
LMNB1-202ENST00000395354 PCP4P48539 62 aa11.75□□□□□ -0.53
LMNB1-202ENST00000395354 ZNF861PO60384 105 aa11.74□□□□□ -0.53
LMNB1-202ENST00000395354 ZNF706Q9Y5V0 76 aaPredicted RBP11.73□□□□□ -0.53
LMNB1-202ENST00000395354 RYR1P21817 5038 aa11.71□□□□□ -0.53
LMNB1-202ENST00000395354 FAM229AH3BQW9 127 aa11.71□□□□□ -0.53
LMNB1-202ENST00000395354 Q6ZVQ6 151 aa11.71□□□□□ -0.53
LMNB1-202ENST00000395354 Q8NBF4 154 aa11.71□□□□□ -0.53
LMNB1-202ENST00000395354 HSPG2P98160 4391 aa11.71□□□□□ -0.54
LMNB1-202ENST00000395354 SPRR4Q96PI1 79 aa11.71□□□□□ -0.54
LMNB1-202ENST00000395354 A0A1W2PNM2 257 aa11.7□□□□□ -0.54
LMNB1-202ENST00000395354 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
LMNB1-202ENST00000395354 Q8N1X5 172 aa11.7□□□□□ -0.54
LMNB1-202ENST00000395354 IGLV7-43P04211 117 aa11.69□□□□□ -0.54
LMNB1-202ENST00000395354 LINC00483Q53H64 154 aa11.69□□□□□ -0.54
LMNB1-202ENST00000395354 KRTAP17-1Q9BYP8 105 aa11.69□□□□□ -0.54
LMNB1-202ENST00000395354 IGKV3D-7A0A0C4DH55 119 aa11.67□□□□□ -0.54
LMNB1-202ENST00000395354 IGFL1Q6UW32 110 aa11.67□□□□□ -0.54
LMNB1-202ENST00000395354 Q5VSD8 79 aa11.67□□□□□ -0.54
LMNB1-202ENST00000395354 PLA2G1BP04054 148 aaKnown RBP11.66□□□□□ -0.54
LMNB1-202ENST00000395354 CRYGAP11844 174 aa11.65□□□□□ -0.54
LMNB1-202ENST00000395354 CXCL6P80162 114 aa11.65□□□□□ -0.54
LMNB1-202ENST00000395354 FAT1Q14517 4588 aa11.64□□□□□ -0.55
LMNB1-202ENST00000395354 NREPQ16612 68 aa11.63□□□□□ -0.55
LMNB1-202ENST00000395354 KRTAP10-4P60372 401 aaPredicted RBP11.62□□□□□ -0.55
LMNB1-202ENST00000395354 SRRM2Q9UQ35 2752 aaKnown RBP11.6□□□□□ -0.55
LMNB1-202ENST00000395354 VPS13BQ7Z7G8 4022 aa11.6□□□□□ -0.55
LMNB1-202ENST00000395354 FAM236AA0A1B0GUQ0 79 aa11.55□□□□□ -0.56
LMNB1-202ENST00000395354 FAM236BA0A1B0GV22 79 aa11.55□□□□□ -0.56
LMNB1-202ENST00000395354 HIST1H4AP62805 103 aaKnown RBP11.55□□□□□ -0.56
LMNB1-202ENST00000395354 A0A0G2JQZ4 141 aa11.54□□□□□ -0.56
LMNB1-202ENST00000395354 KRTAP4-5Q9BYR2 181 aa11.53□□□□□ -0.56
LMNB1-202ENST00000395354 IGLV9-49A0A0B4J1Y8 123 aa11.52□□□□□ -0.57
LMNB1-202ENST00000395354 BPY2O14599 106 aa11.52□□□□□ -0.57
LMNB1-202ENST00000395354 C9orf153Q5TBE3 101 aa11.52□□□□□ -0.57
LMNB1-202ENST00000395354 ANAPC13Q9BS18 74 aa11.51□□□□□ -0.57
LMNB1-202ENST00000395354 SPINK6Q6UWN8 80 aa11.5□□□□□ -0.57
LMNB1-202ENST00000395354 HERC2O95714 4834 aa11.5□□□□□ -0.57
LMNB1-202ENST00000395354 A0A087WVE0 104 aa11.5□□□□□ -0.57
LMNB1-202ENST00000395354 A0A087WSZ3 146 aa11.49□□□□□ -0.57
LMNB1-202ENST00000395354 ATOX1O00244 68 aa11.45□□□□□ -0.58
LMNB1-202ENST00000395354 MOBPQ13875 183 aa11.45□□□□□ -0.58
LMNB1-202ENST00000395354 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
LMNB1-202ENST00000395354 FAM229BQ4G0N7 80 aa11.42□□□□□ -0.58
LMNB1-202ENST00000395354 FLG2Q5D862 2391 aaPredicted RBP11.42□□□□□ -0.58
LMNB1-202ENST00000395354 IGKV4-1P06312 121 aa11.41□□□□□ -0.58
LMNB1-202ENST00000395354 SSBP3-AS1Q7Z2R9 100 aa11.41□□□□□ -0.58
LMNB1-202ENST00000395354 DSCR10P59022 87 aa11.38□□□□□ -0.59
LMNB1-202ENST00000395354 SS18L2Q9UHA2 77 aa11.37□□□□□ -0.59
LMNB1-202ENST00000395354 CD164Q04900 197 aa11.37□□□□□ -0.59
LMNB1-202ENST00000395354 Q8N9L7 120 aa11.36□□□□□ -0.59
LMNB1-202ENST00000395354 LINC00472Q9H8W2 130 aa11.36□□□□□ -0.59
LMNB1-202ENST00000395354 J3KT08 172 aa11.33□□□□□ -0.6
LMNB1-202ENST00000395354 KRTAP1-4P0C5Y4 121 aa11.33□□□□□ -0.6
LMNB1-202ENST00000395354 HRCT1Q6UXD1 115 aa11.31□□□□□ -0.6
LMNB1-202ENST00000395354 SMIM20Q8N5G0 67 aa11.31□□□□□ -0.6
LMNB1-202ENST00000395354 SERP2Q8N6R1 65 aa11.3□□□□□ -0.6
LMNB1-202ENST00000395354 PKHD1L1Q86WI1 4243 aa11.3□□□□□ -0.6
LMNB1-202ENST00000395354 A0A087X002 238 aa11.29□□□□□ -0.6
LMNB1-202ENST00000395354 K7EQZ3 153 aa11.29□□□□□ -0.6
LMNB1-202ENST00000395354 COX7CP15954 63 aa11.28□□□□□ -0.6
LMNB1-202ENST00000395354 DEFB116Q30KQ4 102 aa11.28□□□□□ -0.6
LMNB1-202ENST00000395354 KRTAP13-2Q52LG2 175 aa11.28□□□□□ -0.6
LMNB1-202ENST00000395354 ABCA13Q86UQ4 5058 aa11.28□□□□□ -0.6
LMNB1-202ENST00000395354 UQCRQO14949 82 aa11.28□□□□□ -0.6
LMNB1-202ENST00000395354 A8MWP4 228 aa11.26□□□□□ -0.61
LMNB1-202ENST00000395354 Q96NJ1 140 aa11.26□□□□□ -0.61
LMNB1-202ENST00000395354 TRAV7A0A075B6U4 112 aa11.24□□□□□ -0.61
LMNB1-202ENST00000395354 CCDC179H3BU77 68 aa11.24□□□□□ -0.61
LMNB1-202ENST00000395354 OXTP01178 125 aa11.24□□□□□ -0.61
LMNB1-202ENST00000395354 PRR15Q8IV56 129 aa11.23□□□□□ -0.61
LMNB1-202ENST00000395354 PRR26Q8N8Z3 221 aa11.23□□□□□ -0.61
LMNB1-202ENST00000395354 ASB16-AS1Q495Z4 193 aa11.22□□□□□ -0.61
LMNB1-202ENST00000395354 HCG22E2RYF7 251 aa11.21□□□□□ -0.61
LMNB1-202ENST00000395354 NDUFB1O75438 58 aa11.2□□□□□ -0.62
LMNB1-202ENST00000395354 MYCBP2O75592 4640 aa11.2□□□□□ -0.62
LMNB1-202ENST00000395354 LRP1Q07954 4544 aaKnown RBP11.2□□□□□ -0.62
LMNB1-202ENST00000395354 KRTAP29-1A8MX34 341 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms