RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 USP9YO00507 2555 aaPredicted RBP7.3□□□□□ -1.24
SIN3A-202ENST00000394947 PCNTO95613 3336 aa7.3□□□□□ -1.24
SIN3A-202ENST00000394947 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
SIN3A-202ENST00000394947 KRTAP26-1Q6PEX3 210 aa7.3□□□□□ -1.24
SIN3A-202ENST00000394947 A8MU10 97 aa7.29□□□□□ -1.24
SIN3A-202ENST00000394947 LINC00472Q9H8W2 130 aa7.29□□□□□ -1.24
SIN3A-202ENST00000394947 OXTP01178 125 aa7.29□□□□□ -1.24
SIN3A-202ENST00000394947 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
SIN3A-202ENST00000394947 CEP350Q5VT06 3117 aa7.26□□□□□ -1.25
SIN3A-202ENST00000394947 FLG2Q5D862 2391 aaPredicted RBP7.26□□□□□ -1.25
SIN3A-202ENST00000394947 Q6ZR54 194 aa7.26□□□□□ -1.25
SIN3A-202ENST00000394947 KRTAP1-5Q9BYS1 174 aa7.26□□□□□ -1.25
SIN3A-202ENST00000394947 PIEZO1Q92508 2521 aa7.25□□□□□ -1.25
SIN3A-202ENST00000394947 FASNP49327 2511 aaKnown RBP7.23□□□□□ -1.25
SIN3A-202ENST00000394947 NDUFAF8A1L188 74 aa7.19□□□□□ -1.26
SIN3A-202ENST00000394947 PANO1I0J062 215 aa7.18□□□□□ -1.26
SIN3A-202ENST00000394947 SPRR1AP35321 89 aa7.17□□□□□ -1.26
SIN3A-202ENST00000394947 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
SIN3A-202ENST00000394947 A0A087X002 238 aa7.17□□□□□ -1.26
SIN3A-202ENST00000394947 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
SIN3A-202ENST00000394947 PRRC2CQ9Y520 2896 aaKnown RBP7.15□□□□□ -1.27
SIN3A-202ENST00000394947 A8MUU9 505 aa7.13□□□□□ -1.27
SIN3A-202ENST00000394947 CEP295Q9C0D2 2601 aa7.13□□□□□ -1.27
SIN3A-202ENST00000394947 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
SIN3A-202ENST00000394947 MGAM2Q2M2H8 2515 aa7.09□□□□□ -1.27
SIN3A-202ENST00000394947 CFAP54Q96N23 3096 aa7.06□□□□□ -1.28
SIN3A-202ENST00000394947 SPRR1BP22528 89 aa7.05□□□□□ -1.28
SIN3A-202ENST00000394947 LCE6AA0A183 80 aa7.04□□□□□ -1.28
SIN3A-202ENST00000394947 XIRP2A4UGR9 3374 aa7.03□□□□□ -1.28
SIN3A-202ENST00000394947 FREM2Q5SZK8 3169 aa7□□□□□ -1.29
SIN3A-202ENST00000394947 A0A1B0GVY2 172 aa6.97□□□□□ -1.29
SIN3A-202ENST00000394947 KRTAP11-1Q8IUC1 163 aa6.97□□□□□ -1.29
SIN3A-202ENST00000394947 A0A0C4DFX4 3053 aa6.96□□□□□ -1.29
SIN3A-202ENST00000394947 HECTD1Q9ULT8 2610 aa6.94□□□□□ -1.3
SIN3A-202ENST00000394947 EPG5Q9HCE0 2579 aa6.94□□□□□ -1.3
SIN3A-202ENST00000394947 A6NN06 94 aa6.93□□□□□ -1.3
SIN3A-202ENST00000394947 MKI67P46013 3256 aaKnown RBP6.93□□□□□ -1.3
SIN3A-202ENST00000394947 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
SIN3A-202ENST00000394947 CELSR3Q9NYQ7 3312 aa6.92□□□□□ -1.3
SIN3A-202ENST00000394947 TNP1P09430 55 aa6.9□□□□□ -1.3
SIN3A-202ENST00000394947 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
SIN3A-202ENST00000394947 BRCA2P51587 3418 aa6.89□□□□□ -1.31
SIN3A-202ENST00000394947 LAMA2P24043 3122 aaKnown RBP6.88□□□□□ -1.31
SIN3A-202ENST00000394947 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
SIN3A-202ENST00000394947 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
SIN3A-202ENST00000394947 FLNAP21333 2647 aaKnown RBP6.84□□□□□ -1.31
SIN3A-202ENST00000394947 ATRQ13535 2644 aa6.84□□□□□ -1.31
SIN3A-202ENST00000394947 CFAP46Q8IYW2 2715 aa6.83□□□□□ -1.32
SIN3A-202ENST00000394947 ITPR3Q14573 2671 aa6.83□□□□□ -1.32
SIN3A-202ENST00000394947 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
SIN3A-202ENST00000394947 TRIOO75962 3097 aa6.81□□□□□ -1.32
SIN3A-202ENST00000394947 AKAP13Q12802 2813 aa6.81□□□□□ -1.32
SIN3A-202ENST00000394947 REV3LO60673 3130 aa6.81□□□□□ -1.32
SIN3A-202ENST00000394947 DNAH14Q0VDD8 3507 aa6.78□□□□□ -1.32
SIN3A-202ENST00000394947 RANBP2P49792 3224 aaKnown RBP6.78□□□□□ -1.32
SIN3A-202ENST00000394947 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
SIN3A-202ENST00000394947 NBEAL1Q6ZS30 2694 aa6.75□□□□□ -1.33
SIN3A-202ENST00000394947 CHD7Q9P2D1 2997 aa6.75□□□□□ -1.33
SIN3A-202ENST00000394947 CHD6Q8TD26 2715 aa6.75□□□□□ -1.33
SIN3A-202ENST00000394947 HTTP42858 3142 aa6.75□□□□□ -1.33
SIN3A-202ENST00000394947 LAMA3Q16787 3333 aa6.74□□□□□ -1.33
SIN3A-202ENST00000394947 UNC80Q8N2C7 3258 aa6.71□□□□□ -1.34
SIN3A-202ENST00000394947 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
SIN3A-202ENST00000394947 FLNBO75369 2602 aaKnown RBP6.7□□□□□ -1.34
SIN3A-202ENST00000394947 MAST4O15021 2626 aa6.7□□□□□ -1.34
SIN3A-202ENST00000394947 CDH23Q9H251 3354 aa6.66□□□□□ -1.34
SIN3A-202ENST00000394947 TEX15Q9BXT5 2789 aa6.65□□□□□ -1.35
SIN3A-202ENST00000394947 VPS13AQ96RL7 3174 aa6.63□□□□□ -1.35
SIN3A-202ENST00000394947 SZT2Q5T011 3432 aa6.63□□□□□ -1.35
SIN3A-202ENST00000394947 STAB2Q8WWQ8 2551 aa6.63□□□□□ -1.35
SIN3A-202ENST00000394947 Q6ZRN7 208 aaPredicted RBP6.61□□□□□ -1.35
SIN3A-202ENST00000394947 STAB1Q9NY15 2570 aa6.6□□□□□ -1.35
SIN3A-202ENST00000394947 MGAQ8IWI9 3026 aa6.6□□□□□ -1.35
SIN3A-202ENST00000394947 CENPEQ02224 2701 aa6.59□□□□□ -1.35
SIN3A-202ENST00000394947 P0C880 135 aa6.59□□□□□ -1.35
SIN3A-202ENST00000394947 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
SIN3A-202ENST00000394947 FRYQ5TBA9 3013 aa6.58□□□□□ -1.36
SIN3A-202ENST00000394947 RPS29P62273 56 aaKnown RBP6.57□□□□□ -1.36
SIN3A-202ENST00000394947 COL6A3P12111 3177 aa6.57□□□□□ -1.36
SIN3A-202ENST00000394947 PRUNE2Q8WUY3 3088 aa6.55□□□□□ -1.36
SIN3A-202ENST00000394947 CFAP47Q6ZTR5 3102 aa6.55□□□□□ -1.36
SIN3A-202ENST00000394947 HELZ2Q9BYK8 2649 aaKnown RBP6.55□□□□□ -1.36
SIN3A-202ENST00000394947 CHD9Q3L8U1 2897 aa6.54□□□□□ -1.36
SIN3A-202ENST00000394947 WDFY4Q6ZS81 3184 aa6.53□□□□□ -1.36
SIN3A-202ENST00000394947 NBEAL2Q6ZNJ1 2754 aa6.53□□□□□ -1.36
SIN3A-202ENST00000394947 COL6A5A8TX70 2615 aa6.52□□□□□ -1.36
SIN3A-202ENST00000394947 CRYBG3Q68DQ2 2970 aa6.52□□□□□ -1.37
SIN3A-202ENST00000394947 GCN1Q92616 2671 aaKnown RBP6.52□□□□□ -1.37
SIN3A-202ENST00000394947 H0YAA0 97 aa6.51□□□□□ -1.37
SIN3A-202ENST00000394947 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
SIN3A-202ENST00000394947 XP32Q5T750 250 aa6.47□□□□□ -1.37
SIN3A-202ENST00000394947 VCANP13611 3396 aa6.47□□□□□ -1.37
SIN3A-202ENST00000394947 UNC79Q9P2D8 2635 aa6.46□□□□□ -1.37
SIN3A-202ENST00000394947 SPEGQ15772 3267 aa6.46□□□□□ -1.38
SIN3A-202ENST00000394947 KALRNO60229 2985 aa6.44□□□□□ -1.38
SIN3A-202ENST00000394947 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
SIN3A-202ENST00000394947 TEP1Q99973 2627 aaKnown RBP6.43□□□□□ -1.38
SIN3A-202ENST00000394947 NOTCH1P46531 2555 aa6.39□□□□□ -1.39
SIN3A-202ENST00000394947 LAMA1P25391 3075 aa6.38□□□□□ -1.39
SIN3A-202ENST00000394947 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms