RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 A0A1W2PNN7 141 aa4.54□□□□□ -1.68
SMAD1-202ENST00000394092 LRCOL1A6NCL2 159 aa4.54□□□□□ -1.68
SMAD1-202ENST00000394092 ERC2-IT1O76042 136 aa4.54□□□□□ -1.68
SMAD1-202ENST00000394092 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
SMAD1-202ENST00000394092 SPRR4Q96PI1 79 aa4.54□□□□□ -1.68
SMAD1-202ENST00000394092 COL7A1Q02388 2944 aa4.54□□□□□ -1.68
SMAD1-202ENST00000394092 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
SMAD1-202ENST00000394092 HIGD2AQ9BW72 106 aa4.54□□□□□ -1.68
SMAD1-202ENST00000394092 IGKV4-1P06312 121 aa4.53□□□□□ -1.68
SMAD1-202ENST00000394092 PRLHP81277 87 aa4.53□□□□□ -1.68
SMAD1-202ENST00000394092 Q6ZRN7 208 aaPredicted RBP4.53□□□□□ -1.68
SMAD1-202ENST00000394092 LINC00476Q8WZB0 136 aa4.53□□□□□ -1.68
SMAD1-202ENST00000394092 LYSTQ99698 3801 aa4.53□□□□□ -1.68
SMAD1-202ENST00000394092 DNAH10Q8IVF4 4471 aa4.53□□□□□ -1.68
SMAD1-202ENST00000394092 IGLV8-61A0A075B6I0 122 aa4.52□□□□□ -1.69
SMAD1-202ENST00000394092 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
SMAD1-202ENST00000394092 J3KT08 172 aa4.51□□□□□ -1.69
SMAD1-202ENST00000394092 CHTF8P0CG12 524 aa4.51□□□□□ -1.69
SMAD1-202ENST00000394092 UBE2AP49459 152 aa4.51□□□□□ -1.69
SMAD1-202ENST00000394092 PHF5AQ7RTV0 110 aaKnown RBP4.51□□□□□ -1.69
SMAD1-202ENST00000394092 SMIM29Q86T20 159 aa4.51□□□□□ -1.69
SMAD1-202ENST00000394092 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
SMAD1-202ENST00000394092 SPRR1BP22528 89 aa4.51□□□□□ -1.69
SMAD1-202ENST00000394092 KLKP1Q107X0 134 aa4.51□□□□□ -1.69
SMAD1-202ENST00000394092 DNAH7Q8WXX0 4024 aa4.5□□□□□ -1.69
SMAD1-202ENST00000394092 EPM2AB3EWF7 344 aa4.5□□□□□ -1.69
SMAD1-202ENST00000394092 NDUFC1O43677 76 aa4.5□□□□□ -1.69
SMAD1-202ENST00000394092 IGFL1Q6UW32 110 aa4.5□□□□□ -1.69
SMAD1-202ENST00000394092 Q8N9L7 120 aa4.49□□□□□ -1.69
SMAD1-202ENST00000394092 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
SMAD1-202ENST00000394092 CSMD3Q7Z407 3707 aa4.48□□□□□ -1.69
SMAD1-202ENST00000394092 A0A087WTM6 91 aa4.48□□□□□ -1.69
SMAD1-202ENST00000394092 RPS28P62857 69 aaKnown RBP4.48□□□□□ -1.69
SMAD1-202ENST00000394092 SPACA4Q8TDM5 124 aa4.48□□□□□ -1.69
SMAD1-202ENST00000394092 DPH3Q96FX2 82 aa4.48□□□□□ -1.69
SMAD1-202ENST00000394092 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
SMAD1-202ENST00000394092 VPS13DQ5THJ4 4388 aa4.47□□□□□ -1.69
SMAD1-202ENST00000394092 FAM236DA0A1B0GTK5 79 aa4.47□□□□□ -1.69
SMAD1-202ENST00000394092 FAM236CP0DP71 79 aa4.47□□□□□ -1.69
SMAD1-202ENST00000394092 STARD9Q9P2P6 4700 aa4.47□□□□□ -1.69
SMAD1-202ENST00000394092 ATP5EP56381 51 aaPredicted RBP4.46□□□□□ -1.7
SMAD1-202ENST00000394092 OCR1Q9BZK8 76 aa4.46□□□□□ -1.7
SMAD1-202ENST00000394092 ZNF706Q9Y5V0 76 aaPredicted RBP4.46□□□□□ -1.7
SMAD1-202ENST00000394092 A0A087WSZ3 146 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 H7BZZ5 65 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 RTL8CO15255 209 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 DSCR10P59022 87 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 Q6ZR54 194 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 KRTAP13-1Q8IUC0 172 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 PRKDCP78527 4128 aaKnown RBP4.45□□□□□ -1.7
SMAD1-202ENST00000394092 HCG22E2RYF7 251 aa4.45□□□□□ -1.7
SMAD1-202ENST00000394092 K7EQZ3 153 aa4.44□□□□□ -1.7
SMAD1-202ENST00000394092 RPL37AP61513 92 aaKnown RBP4.44□□□□□ -1.7
SMAD1-202ENST00000394092 SNURFQ9Y675 71 aa4.44□□□□□ -1.7
SMAD1-202ENST00000394092 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.44□□□□□ -1.7
SMAD1-202ENST00000394092 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
SMAD1-202ENST00000394092 PANO1I0J062 215 aa4.43□□□□□ -1.7
SMAD1-202ENST00000394092 C1orf134Q5TEV5 83 aa4.43□□□□□ -1.7
SMAD1-202ENST00000394092 IGLV5-52A0A0A0MRZ9 124 aa4.42□□□□□ -1.7
SMAD1-202ENST00000394092 PLAC8Q9NZF1 115 aa4.42□□□□□ -1.7
SMAD1-202ENST00000394092 A0A0U1RQV1 116 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 TENM2Q9NT68 2774 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 DNAH6Q9C0G6 4158 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 A0A0G2JQZ4 141 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 LCE6AA0A183 80 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 LINC00483Q53H64 154 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
SMAD1-202ENST00000394092 HECTD4Q9Y4D8 3996 aa4.4□□□□□ -1.71
SMAD1-202ENST00000394092 DNHD1Q96M86 4753 aa4.39□□□□□ -1.71
SMAD1-202ENST00000394092 A8MWP4 228 aa4.39□□□□□ -1.71
SMAD1-202ENST00000394092 C5orf47Q569G3 176 aa4.39□□□□□ -1.71
SMAD1-202ENST00000394092 PSORS1C2Q9UIG4 136 aa4.39□□□□□ -1.71
SMAD1-202ENST00000394092 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
SMAD1-202ENST00000394092 ZNF861PO60384 105 aa4.38□□□□□ -1.71
SMAD1-202ENST00000394092 NDUFB1O75438 58 aa4.38□□□□□ -1.71
SMAD1-202ENST00000394092 LY6G6CO95867 125 aa4.38□□□□□ -1.71
SMAD1-202ENST00000394092 PRR15Q8IV56 129 aa4.38□□□□□ -1.71
SMAD1-202ENST00000394092 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
SMAD1-202ENST00000394092 IGLV9-49A0A0B4J1Y8 123 aa4.38□□□□□ -1.71
SMAD1-202ENST00000394092 MP68P56378 58 aa4.37□□□□□ -1.71
SMAD1-202ENST00000394092 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
SMAD1-202ENST00000394092 CASC2Q6XLA1 102 aa4.37□□□□□ -1.71
SMAD1-202ENST00000394092 WFDC13Q8IUB5 93 aa4.37□□□□□ -1.71
SMAD1-202ENST00000394092 KMT2AQ03164 3969 aa4.36□□□□□ -1.71
SMAD1-202ENST00000394092 KRTAP29-1A8MX34 341 aaPredicted RBP4.35□□□□□ -1.71
SMAD1-202ENST00000394092 H3BPC8 53 aa4.35□□□□□ -1.71
SMAD1-202ENST00000394092 WWC2-AS2Q96NR7 200 aa4.35□□□□□ -1.71
SMAD1-202ENST00000394092 DNAH2Q9P225 4427 aa4.35□□□□□ -1.71
SMAD1-202ENST00000394092 OXTP01178 125 aa4.35□□□□□ -1.71
SMAD1-202ENST00000394092 MEGF8Q7Z7M0 2845 aa4.34□□□□□ -1.71
SMAD1-202ENST00000394092 ALMS1Q8TCU4 4167 aa4.34□□□□□ -1.71
SMAD1-202ENST00000394092 IGLV7-43P04211 117 aa4.34□□□□□ -1.71
SMAD1-202ENST00000394092 MOBPQ13875 183 aa4.34□□□□□ -1.71
SMAD1-202ENST00000394092 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.71
SMAD1-202ENST00000394092 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.71
SMAD1-202ENST00000394092 SMIM26A0A096LP01 95 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms