RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 Q6ZR54 194 aa9.55□□□□□ -0.88
TFAP2B-202ENST00000393655 FLNAP21333 2647 aaKnown RBP9.52□□□□□ -0.89
TFAP2B-202ENST00000393655 H1FX-AS1Q4G0G2 97 aa9.5□□□□□ -0.89
TFAP2B-202ENST00000393655 ROMO1P60602 79 aa9.49□□□□□ -0.89
TFAP2B-202ENST00000393655 A0A0A0MQY5 61 aa9.48□□□□□ -0.89
TFAP2B-202ENST00000393655 ADM2Q7Z4H4 148 aa9.48□□□□□ -0.89
TFAP2B-202ENST00000393655 ITPR3Q14573 2671 aa9.46□□□□□ -0.9
TFAP2B-202ENST00000393655 Q5VV11 94 aa9.46□□□□□ -0.9
TFAP2B-202ENST00000393655 HELZ2Q9BYK8 2649 aaKnown RBP9.44□□□□□ -0.9
TFAP2B-202ENST00000393655 PANO1I0J062 215 aa9.43□□□□□ -0.9
TFAP2B-202ENST00000393655 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
TFAP2B-202ENST00000393655 PRAC1Q96KF2 57 aa9.4□□□□□ -0.9
TFAP2B-202ENST00000393655 KRTAP4-16G5E9R7 235 aaPredicted RBP9.4□□□□□ -0.91
TFAP2B-202ENST00000393655 A0A087X002 238 aa9.39□□□□□ -0.91
TFAP2B-202ENST00000393655 Q5XG85 94 aa9.36□□□□□ -0.91
TFAP2B-202ENST00000393655 ATRQ13535 2644 aa9.36□□□□□ -0.91
TFAP2B-202ENST00000393655 MAST4O15021 2626 aa9.34□□□□□ -0.91
TFAP2B-202ENST00000393655 ASB16-AS1Q495Z4 193 aa9.33□□□□□ -0.92
TFAP2B-202ENST00000393655 CYSTM1Q9H1C7 97 aa9.3□□□□□ -0.92
TFAP2B-202ENST00000393655 BPTFQ12830 3046 aa9.29□□□□□ -0.92
TFAP2B-202ENST00000393655 KRTAP29-1A8MX34 341 aaPredicted RBP9.28□□□□□ -0.92
TFAP2B-202ENST00000393655 SPATA8Q6RVD6 105 aa9.27□□□□□ -0.92
TFAP2B-202ENST00000393655 Q6ZRN7 208 aaPredicted RBP9.25□□□□□ -0.93
TFAP2B-202ENST00000393655 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
TFAP2B-202ENST00000393655 A8MUU9 505 aa9.18□□□□□ -0.94
TFAP2B-202ENST00000393655 CFAP46Q8IYW2 2715 aa9.18□□□□□ -0.94
TFAP2B-202ENST00000393655 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
TFAP2B-202ENST00000393655 NOTCH2NLQ7Z3S9 236 aa9.16□□□□□ -0.94
TFAP2B-202ENST00000393655 C20orf166-AS1Q96NR2 134 aa9.14□□□□□ -0.95
TFAP2B-202ENST00000393655 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
TFAP2B-202ENST00000393655 KRTAP13-2Q52LG2 175 aa9.1□□□□□ -0.95
TFAP2B-202ENST00000393655 GOLGB1Q14789 3259 aaKnown RBP9.06□□□□□ -0.96
TFAP2B-202ENST00000393655 PRRC2CQ9Y520 2896 aaKnown RBP9.04□□□□□ -0.96
TFAP2B-202ENST00000393655 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
TFAP2B-202ENST00000393655 H3BS24 57 aa9.03□□□□□ -0.96
TFAP2B-202ENST00000393655 KRTAP7-1Q8IUC3 87 aa9.01□□□□□ -0.97
TFAP2B-202ENST00000393655 FLG2Q5D862 2391 aaPredicted RBP8.98□□□□□ -0.97
TFAP2B-202ENST00000393655 A8MU10 97 aa8.95□□□□□ -0.98
TFAP2B-202ENST00000393655 NBEAL1Q6ZS30 2694 aa8.94□□□□□ -0.98
TFAP2B-202ENST00000393655 TNP1P09430 55 aa8.93□□□□□ -0.98
TFAP2B-202ENST00000393655 TEX15Q9BXT5 2789 aa8.92□□□□□ -0.98
TFAP2B-202ENST00000393655 TEP1Q99973 2627 aaKnown RBP8.89□□□□□ -0.99
TFAP2B-202ENST00000393655 KRTAP25-1Q3LHN0 102 aa8.89□□□□□ -0.99
TFAP2B-202ENST00000393655 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
TFAP2B-202ENST00000393655 DNAH12Q6ZR08 3092 aa8.83□□□□□ -1
TFAP2B-202ENST00000393655 COL6A5A8TX70 2615 aa8.83□□□□□ -1
TFAP2B-202ENST00000393655 BAHCC1Q9P281 2608 aa8.81□□□□□ -1
TFAP2B-202ENST00000393655 CHD6Q8TD26 2715 aa8.8□□□□□ -1
TFAP2B-202ENST00000393655 SETXQ7Z333 2677 aaKnown RBP8.8□□□□□ -1
TFAP2B-202ENST00000393655 UNC79Q9P2D8 2635 aa8.76□□□□□ -1.01
TFAP2B-202ENST00000393655 C5orf42Q9H799 3197 aa8.74□□□□□ -1.01
TFAP2B-202ENST00000393655 A6NN06 94 aa8.74□□□□□ -1.01
TFAP2B-202ENST00000393655 CHD7Q9P2D1 2997 aa8.74□□□□□ -1.01
TFAP2B-202ENST00000393655 AKAP13Q12802 2813 aa8.73□□□□□ -1.01
TFAP2B-202ENST00000393655 CENPEQ02224 2701 aa8.72□□□□□ -1.01
TFAP2B-202ENST00000393655 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
TFAP2B-202ENST00000393655 XP32Q5T750 250 aa8.71□□□□□ -1.01
TFAP2B-202ENST00000393655 CEP350Q5VT06 3117 aa8.71□□□□□ -1.02
TFAP2B-202ENST00000393655 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
TFAP2B-202ENST00000393655 GCN1Q92616 2671 aaKnown RBP8.67□□□□□ -1.02
TFAP2B-202ENST00000393655 C10orf95Q9H7T3 257 aa8.66□□□□□ -1.02
TFAP2B-202ENST00000393655 ZNF292O60281 2723 aa8.66□□□□□ -1.02
TFAP2B-202ENST00000393655 CHD9Q3L8U1 2897 aa8.64□□□□□ -1.03
TFAP2B-202ENST00000393655 TPRXLQ17RH7 258 aa8.64□□□□□ -1.03
TFAP2B-202ENST00000393655 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
TFAP2B-202ENST00000393655 A0A1B0GVY2 172 aa8.63□□□□□ -1.03
TFAP2B-202ENST00000393655 KRTAP1-4P0C5Y4 121 aa8.63□□□□□ -1.03
TFAP2B-202ENST00000393655 NOTCH1P46531 2555 aa8.62□□□□□ -1.03
TFAP2B-202ENST00000393655 IGSF10Q6WRI0 2623 aa8.59□□□□□ -1.03
TFAP2B-202ENST00000393655 UTRNP46939 3433 aa8.58□□□□□ -1.04
TFAP2B-202ENST00000393655 NSD1Q96L73 2696 aaPredicted RBP8.57□□□□□ -1.04
TFAP2B-202ENST00000393655 STAB2Q8WWQ8 2551 aa8.57□□□□□ -1.04
TFAP2B-202ENST00000393655 KMT2BQ9UMN6 2715 aaPredicted RBP8.56□□□□□ -1.04
TFAP2B-202ENST00000393655 MGAQ8IWI9 3026 aa8.55□□□□□ -1.04
TFAP2B-202ENST00000393655 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
TFAP2B-202ENST00000393655 PRO2289Q9P1D8 64 aa8.54□□□□□ -1.04
TFAP2B-202ENST00000393655 ITPR2Q14571 2701 aa8.54□□□□□ -1.04
TFAP2B-202ENST00000393655 NDUFAF8A1L188 74 aa8.52□□□□□ -1.05
TFAP2B-202ENST00000393655 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
TFAP2B-202ENST00000393655 NBEAL2Q6ZNJ1 2754 aa8.45□□□□□ -1.06
TFAP2B-202ENST00000393655 TRANK1O15050 2925 aa8.41□□□□□ -1.06
TFAP2B-202ENST00000393655 UBR5O95071 2799 aaPredicted RBP8.4□□□□□ -1.06
TFAP2B-202ENST00000393655 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.07
TFAP2B-202ENST00000393655 A0A0C4DFX4 3053 aa8.3□□□□□ -1.08
TFAP2B-202ENST00000393655 DSPP15924 2871 aaKnown RBP8.3□□□□□ -1.08
TFAP2B-202ENST00000393655 HTTP42858 3142 aa8.3□□□□□ -1.08
TFAP2B-202ENST00000393655 H0YAA0 97 aa8.27□□□□□ -1.09
TFAP2B-202ENST00000393655 CFAP54Q96N23 3096 aa8.27□□□□□ -1.09
TFAP2B-202ENST00000393655 P0C880 135 aa8.24□□□□□ -1.09
TFAP2B-202ENST00000393655 RANBP2P49792 3224 aaKnown RBP8.23□□□□□ -1.09
TFAP2B-202ENST00000393655 FRYQ5TBA9 3013 aa8.23□□□□□ -1.09
TFAP2B-202ENST00000393655 ITPR1Q14643 2758 aa8.22□□□□□ -1.09
TFAP2B-202ENST00000393655 PCNTO95613 3336 aa8.2□□□□□ -1.1
TFAP2B-202ENST00000393655 HIVEP1P15822 2718 aa8.16□□□□□ -1.1
TFAP2B-202ENST00000393655 WDFY4Q6ZS81 3184 aa8.13□□□□□ -1.11
TFAP2B-202ENST00000393655 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
TFAP2B-202ENST00000393655 PRUNE2Q8WUY3 3088 aa8.08□□□□□ -1.12
TFAP2B-202ENST00000393655 LAMA3Q16787 3333 aa8.08□□□□□ -1.12
TFAP2B-202ENST00000393655 UTP20O75691 2785 aaKnown RBP8.07□□□□□ -1.12
TFAP2B-202ENST00000393655 APCP25054 2843 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms