RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 DNAH5Q8TE73 4624 aa13.6□□□□□ -0.23
HMGA2-203ENST00000393578 SRRM2Q9UQ35 2752 aaKnown RBP13.6□□□□□ -0.23
HMGA2-203ENST00000393578 SACSQ9NZJ4 4579 aa13.6□□□□□ -0.23
HMGA2-203ENST00000393578 IGLV8-61A0A075B6I0 122 aa13.6□□□□□ -0.23
HMGA2-203ENST00000393578 A0A1W2PNM2 257 aa13.6□□□□□ -0.23
HMGA2-203ENST00000393578 FAM30AQ9NZY2 134 aa13.59□□□□□ -0.23
HMGA2-203ENST00000393578 Q8NBF4 154 aa13.58□□□□□ -0.24
HMGA2-203ENST00000393578 LCE6AA0A183 80 aa13.58□□□□□ -0.24
HMGA2-203ENST00000393578 Q6ZSA8 131 aa13.57□□□□□ -0.24
HMGA2-203ENST00000393578 DNAH8Q96JB1 4490 aa13.57□□□□□ -0.24
HMGA2-203ENST00000393578 PKD1P98161 4303 aa13.56□□□□□ -0.24
HMGA2-203ENST00000393578 CIRBP-AS1Q8TBR5 109 aa13.56□□□□□ -0.24
HMGA2-203ENST00000393578 HAMPP81172 84 aa13.55□□□□□ -0.24
HMGA2-203ENST00000393578 SPRR4Q96PI1 79 aa13.55□□□□□ -0.24
HMGA2-203ENST00000393578 KRTAP10-1P60331 282 aa13.54□□□□□ -0.24
HMGA2-203ENST00000393578 IGFL1Q6UW32 110 aa13.54□□□□□ -0.24
HMGA2-203ENST00000393578 FAM236AA0A1B0GUQ0 79 aa13.53□□□□□ -0.24
HMGA2-203ENST00000393578 FAM236BA0A1B0GV22 79 aa13.53□□□□□ -0.24
HMGA2-203ENST00000393578 ZNF861PO60384 105 aa13.53□□□□□ -0.24
HMGA2-203ENST00000393578 CXCL6P80162 114 aa13.52□□□□□ -0.24
HMGA2-203ENST00000393578 NREPQ16612 68 aa13.51□□□□□ -0.25
HMGA2-203ENST00000393578 CRYGAP11844 174 aa13.51□□□□□ -0.25
HMGA2-203ENST00000393578 SCXQ7RTU7 201 aa13.51□□□□□ -0.25
HMGA2-203ENST00000393578 ANAPC13Q9BS18 74 aa13.51□□□□□ -0.25
HMGA2-203ENST00000393578 ZNF706Q9Y5V0 76 aaPredicted RBP13.51□□□□□ -0.25
HMGA2-203ENST00000393578 HIST1H4AP62805 103 aaKnown RBP13.5□□□□□ -0.25
HMGA2-203ENST00000393578 LINC00483Q53H64 154 aa13.48□□□□□ -0.25
HMGA2-203ENST00000393578 LINC00336Q6ZUF6 198 aa13.47□□□□□ -0.25
HMGA2-203ENST00000393578 A0A087WVE0 104 aa13.47□□□□□ -0.25
HMGA2-203ENST00000393578 IGLV7-43P04211 117 aa13.47□□□□□ -0.25
HMGA2-203ENST00000393578 A0A0G2JQZ4 141 aa13.46□□□□□ -0.25
HMGA2-203ENST00000393578 BPY2O14599 106 aa13.39□□□□□ -0.27
HMGA2-203ENST00000393578 ATOX1O00244 68 aa13.36□□□□□ -0.27
HMGA2-203ENST00000393578 IGLV9-49A0A0B4J1Y8 123 aa13.36□□□□□ -0.27
HMGA2-203ENST00000393578 RPL37AP61513 92 aaKnown RBP13.36□□□□□ -0.27
HMGA2-203ENST00000393578 A0A087WSZ3 146 aa13.34□□□□□ -0.27
HMGA2-203ENST00000393578 C9orf153Q5TBE3 101 aa13.34□□□□□ -0.27
HMGA2-203ENST00000393578 ANAPC11Q9NYG5 84 aa13.31□□□□□ -0.28
HMGA2-203ENST00000393578 A0A1B0GVY2 172 aa13.3□□□□□ -0.28
HMGA2-203ENST00000393578 RYR2Q92736 4967 aa13.3□□□□□ -0.28
HMGA2-203ENST00000393578 IGKV4-1P06312 121 aa13.28□□□□□ -0.28
HMGA2-203ENST00000393578 Q8N9L7 120 aa13.28□□□□□ -0.28
HMGA2-203ENST00000393578 LRP1BQ9NZR2 4599 aa13.27□□□□□ -0.29
HMGA2-203ENST00000393578 PKHD1P08F94 4074 aa13.27□□□□□ -0.29
HMGA2-203ENST00000393578 MOBPQ13875 183 aa13.27□□□□□ -0.29
HMGA2-203ENST00000393578 KMT2CQ8NEZ4 4911 aaKnown RBP13.23□□□□□ -0.29
HMGA2-203ENST00000393578 DSCR10P59022 87 aa13.23□□□□□ -0.29
HMGA2-203ENST00000393578 CCDC179H3BU77 68 aa13.21□□□□□ -0.29
HMGA2-203ENST00000393578 SERP2Q8N6R1 65 aa13.19□□□□□ -0.3
HMGA2-203ENST00000393578 COX7CP15954 63 aa13.18□□□□□ -0.3
HMGA2-203ENST00000393578 UQCRQO14949 82 aa13.18□□□□□ -0.3
HMGA2-203ENST00000393578 DEFB116Q30KQ4 102 aa13.17□□□□□ -0.3
HMGA2-203ENST00000393578 LINC00472Q9H8W2 130 aa13.17□□□□□ -0.3
HMGA2-203ENST00000393578 K7EQZ3 153 aa13.16□□□□□ -0.3
HMGA2-203ENST00000393578 DYNC1H1Q14204 4646 aaKnown RBP13.15□□□□□ -0.3
HMGA2-203ENST00000393578 HRCT1Q6UXD1 115 aa13.14□□□□□ -0.31
HMGA2-203ENST00000393578 SSBP3-AS1Q7Z2R9 100 aa13.13□□□□□ -0.31
HMGA2-203ENST00000393578 SMIM20Q8N5G0 67 aa13.13□□□□□ -0.31
HMGA2-203ENST00000393578 VPS13BQ7Z7G8 4022 aa13.13□□□□□ -0.31
HMGA2-203ENST00000393578 FAM229BQ4G0N7 80 aa13.12□□□□□ -0.31
HMGA2-203ENST00000393578 SS18L2Q9UHA2 77 aa13.12□□□□□ -0.31
HMGA2-203ENST00000393578 TRAV7A0A075B6U4 112 aa13.09□□□□□ -0.31
HMGA2-203ENST00000393578 J3KT08 172 aa13.09□□□□□ -0.31
HMGA2-203ENST00000393578 A0A087X002 238 aa13.07□□□□□ -0.32
HMGA2-203ENST00000393578 CD164Q04900 197 aa13.07□□□□□ -0.32
HMGA2-203ENST00000393578 KRTAP1-4P0C5Y4 121 aa13.07□□□□□ -0.32
HMGA2-203ENST00000393578 A8MWP4 228 aa13.05□□□□□ -0.32
HMGA2-203ENST00000393578 Q96NJ1 140 aa13.05□□□□□ -0.32
HMGA2-203ENST00000393578 KRTAP13-2Q52LG2 175 aa13.04□□□□□ -0.32
HMGA2-203ENST00000393578 SPINK6Q6UWN8 80 aa13.03□□□□□ -0.32
HMGA2-203ENST00000393578 PRR15Q8IV56 129 aa13.03□□□□□ -0.32
HMGA2-203ENST00000393578 HCG22E2RYF7 251 aa13.02□□□□□ -0.32
HMGA2-203ENST00000393578 SMR3BP02814 79 aaPredicted RBP13.02□□□□□ -0.32
HMGA2-203ENST00000393578 APOBP04114 4563 aaKnown RBP13□□□□□ -0.33
HMGA2-203ENST00000393578 OCR1Q9BZK8 76 aa12.98□□□□□ -0.33
HMGA2-203ENST00000393578 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
HMGA2-203ENST00000393578 NDUFB1O75438 58 aa12.97□□□□□ -0.33
HMGA2-203ENST00000393578 RYR3Q15413 4870 aa12.93□□□□□ -0.34
HMGA2-203ENST00000393578 KRTAP10-4P60372 401 aaPredicted RBP12.91□□□□□ -0.34
HMGA2-203ENST00000393578 ASB16-AS1Q495Z4 193 aa12.91□□□□□ -0.34
HMGA2-203ENST00000393578 WFDC13Q8IUB5 93 aa12.91□□□□□ -0.34
HMGA2-203ENST00000393578 KRTAP29-1A8MX34 341 aaPredicted RBP12.9□□□□□ -0.34
HMGA2-203ENST00000393578 C20orf197Q8N268 126 aa12.9□□□□□ -0.34
HMGA2-203ENST00000393578 CASC2Q6XLA1 102 aa12.89□□□□□ -0.35
HMGA2-203ENST00000393578 CDK2AP2O75956 126 aa12.88□□□□□ -0.35
HMGA2-203ENST00000393578 Q5XG85 94 aa12.87□□□□□ -0.35
HMGA2-203ENST00000393578 TYMSOSQ8TAI1 123 aa12.87□□□□□ -0.35
HMGA2-203ENST00000393578 CYSTM1Q9H1C7 97 aa12.87□□□□□ -0.35
HMGA2-203ENST00000393578 MMP24-AS1A0A0U1RRL7 71 aa12.85□□□□□ -0.35
HMGA2-203ENST00000393578 A0A1B0GVX0 72 aa12.85□□□□□ -0.35
HMGA2-203ENST00000393578 KLKP1Q107X0 134 aa12.83□□□□□ -0.35
HMGA2-203ENST00000393578 IGHV6-1A0A0B4J1U7 121 aa12.81□□□□□ -0.36
HMGA2-203ENST00000393578 TMEM254Q8TBM7 123 aa12.81□□□□□ -0.36
HMGA2-203ENST00000393578 FAT1Q14517 4588 aa12.81□□□□□ -0.36
HMGA2-203ENST00000393578 hDV103S1A0JD37 113 aa12.8□□□□□ -0.36
HMGA2-203ENST00000393578 C4orf48Q5BLP8 95 aa12.8□□□□□ -0.36
HMGA2-203ENST00000393578 C8orf17Q9NRJ1 99 aa12.8□□□□□ -0.36
HMGA2-203ENST00000393578 PRR26Q8N8Z3 221 aa12.8□□□□□ -0.36
HMGA2-203ENST00000393578 LIMD2Q9BT23 127 aa12.8□□□□□ -0.36
HMGA2-203ENST00000393578 SNURFQ9Y675 71 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms