RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 H0YAA0 97 aa-0.86□□□□□ -2.55
RNU6-440P-201ENST00000390882 SNHG12Q9BXW3 62 aa-0.86□□□□□ -2.55
RNU6-440P-201ENST00000390882 ABCC3O15438 1527 aa-0.86□□□□□ -2.55
RNU6-440P-201ENST00000390882 MYO18BQ8IUG5 2567 aa-0.86□□□□□ -2.55
RNU6-440P-201ENST00000390882 PIK3C2BO00750 1634 aa-0.86□□□□□ -2.55
RNU6-440P-201ENST00000390882 THOC2Q8NI27 1593 aaKnown RBP-0.87□□□□□ -2.55
RNU6-440P-201ENST00000390882 USP9YO00507 2555 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-440P-201ENST00000390882 PLCH1Q4KWH8 1693 aa-0.87□□□□□ -2.55
RNU6-440P-201ENST00000390882 EPPK1P58107 5090 aaKnown RBP-0.87□□□□□ -2.55
RNU6-440P-201ENST00000390882 DEFB110Q30KQ9 67 aa-0.87□□□□□ -2.55
RNU6-440P-201ENST00000390882 RABAC1Q9UI14 185 aa-0.87□□□□□ -2.55
RNU6-440P-201ENST00000390882 KIF14Q15058 1648 aa-0.87□□□□□ -2.55
RNU6-440P-201ENST00000390882 LAMA1P25391 3075 aa-0.87□□□□□ -2.55
RNU6-440P-201ENST00000390882 ACACAQ13085 2346 aa-0.88□□□□□ -2.55
RNU6-440P-201ENST00000390882 MTORP42345 2549 aa-0.88□□□□□ -2.55
RNU6-440P-201ENST00000390882 ITSN1Q15811 1721 aa-0.88□□□□□ -2.55
RNU6-440P-201ENST00000390882 CEBPZOSA8MTT3 80 aa-0.88□□□□□ -2.55
RNU6-440P-201ENST00000390882 LYNX1G3V0Z9 82 aa-0.88□□□□□ -2.55
RNU6-440P-201ENST00000390882 S100A8P05109 93 aa-0.88□□□□□ -2.55
RNU6-440P-201ENST00000390882 PKIAP61925 76 aa-0.88□□□□□ -2.55
RNU6-440P-201ENST00000390882 SNRPFP62306 86 aaKnown RBP-0.88□□□□□ -2.55
RNU6-440P-201ENST00000390882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 ITPR3Q14573 2671 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 NEBP20929 6669 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 APOBP04114 4563 aaKnown RBP-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 ACYP1P07311 99 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 IFI6P09912 130 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 IAPPP10997 89 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 MT1HP80294 61 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 DEFA5Q01523 94 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 LINC00643Q86TS7 51 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 CFAP43Q8NDM7 1665 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 PPLO60437 1756 aa-0.89□□□□□ -2.55
RNU6-440P-201ENST00000390882 PRRC2CQ9Y520 2896 aaKnown RBP-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 DNAH11Q96DT5 4516 aa-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 ANKRD36CQ5JPF3 1778 aa-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 RYR1P21817 5038 aa-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 CCNB3Q8WWL7 1395 aa-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 K7EP34 96 aa-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 ZZEF1O43149 2961 aa-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 DEFB106AQ8N104 65 aa-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 ANKRD11Q6UB99 2663 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-440P-201ENST00000390882 DMXL1Q9Y485 3027 aa-0.91□□□□□ -2.55
RNU6-440P-201ENST00000390882 DEFB130BP0DP73 79 aa-0.91□□□□□ -2.56
RNU6-440P-201ENST00000390882 DEFB130AP0DP74 79 aa-0.91□□□□□ -2.56
RNU6-440P-201ENST00000390882 IFI27P40305 119 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-440P-201ENST00000390882 ZC3H13Q5T200 1668 aaKnown RBP-0.91□□□□□ -2.56
RNU6-440P-201ENST00000390882 MGAM2Q2M2H8 2515 aa-0.92□□□□□ -2.56
RNU6-440P-201ENST00000390882 UMAD1C9J7I0 102 aa-0.92□□□□□ -2.56
RNU6-440P-201ENST00000390882 NDUFA4O00483 81 aa-0.92□□□□□ -2.56
RNU6-440P-201ENST00000390882 PYY3Q5JQD4 70 aa-0.92□□□□□ -2.56
RNU6-440P-201ENST00000390882 S100A16Q96FQ6 103 aaKnown RBP-0.92□□□□□ -2.56
RNU6-440P-201ENST00000390882 TTC37Q6PGP7 1564 aa-0.92□□□□□ -2.56
RNU6-440P-201ENST00000390882 RICTORQ6R327 1708 aa-0.92□□□□□ -2.56
RNU6-440P-201ENST00000390882 GCN1Q92616 2671 aaKnown RBP-0.92□□□□□ -2.56
RNU6-440P-201ENST00000390882 HYDINQ4G0P3 5121 aa-0.93□□□□□ -2.56
RNU6-440P-201ENST00000390882 FAM186AA6NE01 2351 aa-0.93□□□□□ -2.56
RNU6-440P-201ENST00000390882 Q9H521 79 aa-0.93□□□□□ -2.56
RNU6-440P-201ENST00000390882 DNAH2Q9P225 4427 aa-0.93□□□□□ -2.56
RNU6-440P-201ENST00000390882 PARP4Q9UKK3 1724 aaKnown RBP-0.93□□□□□ -2.56
RNU6-440P-201ENST00000390882 LAMA3Q16787 3333 aa-0.94□□□□□ -2.56
RNU6-440P-201ENST00000390882 KIAA0586Q9BVV6 1533 aa-0.94□□□□□ -2.56
RNU6-440P-201ENST00000390882 DEFB1P60022 68 aa-0.94□□□□□ -2.56
RNU6-440P-201ENST00000390882 KRTAP19-5Q3LI72 72 aa-0.94□□□□□ -2.56
RNU6-440P-201ENST00000390882 ITSN2Q9NZM3 1697 aa-0.94□□□□□ -2.56
RNU6-440P-201ENST00000390882 ACACBO00763 2458 aa-0.95□□□□□ -2.56
RNU6-440P-201ENST00000390882 PKD1L2Q7Z442 2459 aa-0.95□□□□□ -2.56
RNU6-440P-201ENST00000390882 RNF17Q9BXT8 1623 aaKnown RBP-0.95□□□□□ -2.56
RNU6-440P-201ENST00000390882 PVALEFA0A1B0GWK0 134 aa-0.95□□□□□ -2.56
RNU6-440P-201ENST00000390882 ATP5EP2Q5VTU8 51 aa-0.95□□□□□ -2.56
RNU6-440P-201ENST00000390882 V9GYS6 101 aa-0.95□□□□□ -2.56
RNU6-440P-201ENST00000390882 PLECQ15149 4684 aaKnown RBP-0.96□□□□□ -2.56
RNU6-440P-201ENST00000390882 NREPQ16612 68 aa-0.96□□□□□ -2.56
RNU6-440P-201ENST00000390882 TJP1Q07157 1748 aa-0.96□□□□□ -2.56
RNU6-440P-201ENST00000390882 TOGARAM1Q9Y4F4 1720 aa-0.96□□□□□ -2.56
RNU6-440P-201ENST00000390882 DOPEY1Q5JWR5 2465 aa-0.97□□□□□ -2.56
RNU6-440P-201ENST00000390882 LRRK2Q5S007 2527 aa-0.97□□□□□ -2.56
RNU6-440P-201ENST00000390882 DEFB131BA0A096LNP1 70 aa-0.97□□□□□ -2.56
RNU6-440P-201ENST00000390882 KANTRA0A1W2PQU2 76 aa-0.97□□□□□ -2.56
RNU6-440P-201ENST00000390882 TRIOO75962 3097 aa-0.97□□□□□ -2.56
RNU6-440P-201ENST00000390882 CEP290O15078 2479 aa-0.97□□□□□ -2.57
RNU6-440P-201ENST00000390882 HFM1A2PYH4 1435 aa-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 DNAH1Q9P2D7 4330 aa-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 KDM5DQ9BY66 1539 aa-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 LAMA2P24043 3122 aaKnown RBP-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 MRPL33O75394 65 aaKnown RBP-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 HMGA1P17096 107 aaKnown RBP-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 KIF1AQ12756 1690 aa-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 NRAPQ86VF7 1730 aa-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 BIRC6Q9NR09 4857 aa-0.98□□□□□ -2.57
RNU6-440P-201ENST00000390882 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.99□□□□□ -2.57
RNU6-440P-201ENST00000390882 CCDC168Q8NDH2 2452 aa-0.99□□□□□ -2.57
RNU6-440P-201ENST00000390882 UACAQ9BZF9 1416 aa-0.99□□□□□ -2.57
RNU6-440P-201ENST00000390882 ARHGAP35Q9NRY4 1499 aa-0.99□□□□□ -2.57
RNU6-440P-201ENST00000390882 RNF213Q63HN8 5207 aa-1□□□□□ -2.57
RNU6-440P-201ENST00000390882 INO80Q9ULG1 1556 aaPredicted RBP-1□□□□□ -2.57
RNU6-440P-201ENST00000390882 NHSQ6T4R5 1651 aa-1□□□□□ -2.57
RNU6-440P-201ENST00000390882 CMYA5Q8N3K9 4069 aa-1□□□□□ -2.57
RNU6-440P-201ENST00000390882 TIMM8BQ9Y5J9 83 aaPredicted RBP-1□□□□□ -2.57
RNU6-440P-201ENST00000390882 DSPP15924 2871 aaKnown RBP-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms