RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TRAV36DV7A0A075B6V5 113 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 J3QR89 54 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 LINC00694P0DN24 101 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 HMGA1P17096 107 aaKnown RBP-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 NCBP2-AS2Q69YL0 99 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 PPP1R14BQ96C90 147 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 CCDC167Q9P0B6 97 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 ATPIF1Q9UII2 106 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 PHLPP1O60346 1717 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 MYH13Q9UKX3 1938 aa-1.27□□□□□ -2.61
TRAJ28-201ENST00000390509 DOCK2Q92608 1830 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 KIAA0586Q9BVV6 1533 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 HSBP1L1C9JCN9 74 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 CYB5AP00167 134 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 S100A8P05109 93 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 CRIP1P50238 77 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 SMCO1Q147U7 214 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 SAMD13Q5VXD3 122 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 RPL13AP3Q6NVV1 102 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 TOMM20LQ6UXN7 152 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 PDCD10Q9BUL8 212 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 SPANXCQ9NY87 97 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 CACFD1Q9UGQ2 172 aa-1.28□□□□□ -2.61
TRAJ28-201ENST00000390509 ANKRD36A6QL64 1941 aa-1.28□□□□□ -2.62
TRAJ28-201ENST00000390509 RGPD2P0DJD1 1756 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 TOPAZ1Q8N9V7 1692 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 CLASP1Q7Z460 1538 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 CFTRP13569 1480 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 CDH23Q9H251 3354 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 K7ERU9 68 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 NDUFB1O75438 58 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 MPC2O95563 127 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 UQCRHP07919 91 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 IFI27P40305 119 aaPredicted RBP-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 POLR2KP53803 58 aaKnown RBP-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 ATP5EP56381 51 aaPredicted RBP-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 KRTDAPP60985 99 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 CCDC153Q494R4 210 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 MORN2Q502X0 79 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 FAM107BQ9H098 131 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 ABRACLQ9P1F3 81 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 ATP6V1DQ9Y5K8 247 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 PDCD11Q14690 1871 aaKnown RBP-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 UBR3Q6ZT12 1888 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 A0A1B0GUL6 1792 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 ITSN2Q9NZM3 1697 aa-1.29□□□□□ -2.62
TRAJ28-201ENST00000390509 NWD1Q149M9 1564 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 ABCC2Q92887 1545 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 OVOS2A0A0J9YW53 1432 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 OVOS2Q6IE36 1432 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 OOSP1A8MZH6 123 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 H3BQ15 152 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 M0R2Z0 102 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 NDUFA4O00483 81 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 APOC2P02655 101 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 CATR1Q13166 79 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 PLGLAQ15195 96 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 ETDBQ3ZM63 59 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 SKA2Q8WVK7 121 aaPredicted RBP-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 DPH3P1Q9H4G8 78 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 KAAG1Q9UBP8 84 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 KIF1AQ12756 1690 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 ZC3H13Q5T200 1668 aaKnown RBP-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 NEXMIFQ5QGS0 1516 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 MYH8P13535 1937 aa-1.3□□□□□ -2.62
TRAJ28-201ENST00000390509 FHAD1B1AJZ9 1412 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 UACAQ9BZF9 1416 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 NUP188Q5SRE5 1749 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 SCN7AQ01118 1682 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 FAM24AA6NFZ4 105 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 ATOX1O00244 68 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 TPM3P06753 285 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 LINC00032P0C843 101 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 COPZ1P61923 177 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 TRIQKQ629K1 86 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 ZNF720Q7Z2F6 126 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 ATP6V1G3Q96LB4 118 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 AIF1LQ9BQI0 150 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 DPY30Q9C005 99 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 HSPB11Q9Y547 144 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 MYH2Q9UKX2 1941 aa-1.31□□□□□ -2.62
TRAJ28-201ENST00000390509 QSER1Q2KHR3 1735 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 SPHKAPQ2M3C7 1700 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 SUPT6HQ7KZ85 1726 aaKnown RBP-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 SHPRHQ149N8 1683 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 PLCH1Q4KWH8 1693 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 NESP48681 1621 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 UMAD1C9J7I0 102 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 CTXN2P0C2S0 81 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 S100GP29377 79 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 CD52P31358 61 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 SMIM3Q9BZL3 60 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 PAIP2BQ9ULR5 123 aaKnown RBP-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 RAPGEF2Q9Y4G8 1499 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 UBR1Q8IWV7 1749 aa-1.32□□□□□ -2.62
TRAJ28-201ENST00000390509 ROCK2O75116 1388 aaKnown RBP-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 PREX2Q70Z35 1606 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 NRXN3Q9Y4C0 1643 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms